| 1 | LAMIV11 ;SLC/DLG/FHS/DAL - PROCESS VITEK GPS & YBC CARDS ;7/20/90 09:38 ;
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| 2 | ;;5.2;AUTOMATED LAB INSTRUMENTS;;Sep 27, 1994
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| 3 | Q:$E(IN,1,2)'="01" ;No MIC results
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| 4 | ;Find the organism and mic results
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| 5 | S O=$E(IN,5,6),V=$E(IN,10),V=$S("0"[V:"0F","1"[V:"0FB",1:"") Q:V="" S TYPE=$O(^LAB(62.4,TSK,7,"B",V,0)) Q:TYPE<1
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| 6 | S V=$O(^LAB(62.4,TSK,7,TYPE,1,"C",O,0)) Q:V<1 S ORG(ISOL)=+^LAB(62.4,TSK,7,TYPE,1,V,0)
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| 7 | F I2=17:6:92 S V=$E(IN,I2) D MICF
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| 8 | S LRT=CARD,CARD=$O(^LAB(62.4,TSK,7,"B","10",0))
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| 9 | S RMK="",FL=$E(IN,3) F CODE=46,47 D MSG
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| 10 | I $E(IN,3)=1 S FL=$E(IN,8) F CODE=48,49 D MSG
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| 11 | I $E(IN,3)=1 S FL=$E(IN,9) F CODE=50,51 D MSG
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| 12 | S CARD=LRT K LRT Q
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| 13 | MICF S O=$E(IN,(I2+4)),I4=$O(^LAB(62.4,TSK,7,CARD,2,"C",O,0)) Q:I4'>0 S I3=$P(^LAB(62.4,TSK,7,CARD,2,I4,0),U,2) X $P(^(0),U,3) S:V]"" MIC(ISOL,I3)=V
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| 14 | Q
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| 15 | 511 S C=0,U="^",I1=3,I2=7 Q:$E(IN,1,2)'="FF" ;0F, 5.11, Gram Pos ID card
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| 16 | ;CARD "OFB" is for the Catalase -/Non-Beta-Hemolytic or Catalase +/Coagulase + part
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| 17 | I $E(IN,3,4)="FF" S CARD=$O(^LAB(62.4,TSK,7,"B","0FB",0)) Q:CARD'>0 F I=11,15 S X1=$O(^LAB(62.4,TSK,7,CARD,1,"C",$E(IN,I,I+1),0)) D L2:X1>0 Q:$D(ORG)
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| 18 | I $E(IN,3,4)'="FF" S CARD=$O(^LAB(62.4,TSK,7,"B","0F",0)) Q:CARD'>0 F I=3,7 S X1=$O(^LAB(62.4,TSK,7,CARD,1,"C",$E(IN,I,I+1),0)) D L2:X1>0 Q:$D(ORG)
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| 19 | S RMK="",CODE=46,FL=$E(IN,90) D MSG S CODE=47,FL=$E(IN,91) D MSG
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| 20 | Q
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| 21 | L2 N X2 S (X,X2)=$E(IN,I+2,I+3) D PROB I X>80 S ORG(ISOL,1)=X2,ORG(ISOL)=+^LAB(62.4,TSK,7,CARD,1,X1,0) ;accept if prob>80%
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| 22 | Q
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| 23 | HEX S XX=X,X="" F II=1:1:$L(XX) S X=X*16+($F("0123456789ABCDEF",$E(XX,II))-2)
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| 24 | Q
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| 25 | 54 S C=0,U="^" ;05, 5.4, Yeast card
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| 26 | F I=1,5 S X1=$O(^LAB(62.4,TSK,7,CARD,1,"C",$E(IN,I,I+1),0)) D L2:X1>0
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| 27 | D RMK
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| 28 | Q
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| 29 | RMK S RMK="" S CODE=41,FL=$E(IN,42) D MSG S CODE=42,FL=$E(IN,42) D MSG F CODE=44:1:46 S FL=$E(IN,CODE) D MSG
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| 30 | S CODE=41,FL=$E(IN,43) D MSG S CODE=42 D MSG
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| 31 | Q
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| 32 | MSG F X1=0:0 S X1=$O(^LAB(62.4,TSK,7,CARD,4,"B",CODE,X1)) Q:X1'>0 D MS2
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| 33 | Q
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| 34 | MS2 S X3=^LAB(62.4,TSK,7,CARD,4,X1,0)
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| 35 | S X4=$P(X3,U,2) I $L(X4),X4'=FL Q ;
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| 36 | S:$L(RMK) RMK=RMK_", " S RMK=RMK_$P(X3,U,3)
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| 37 | Q
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| 38 | PROB D HEX I X>100 S X="" Q
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| 39 | S:X=0 X="<1" S X=X_"% Probability" Q
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