source: WorldVistAEHR/trunk/r/LAB_SERVICE-LR-LS/LRPXSXRA.m@ 1006

Last change on this file since 1006 was 613, checked in by George Lilly, 15 years ago

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1LRPXSXRA ; SLC/PKR - Build indexes for Lab Anatomic Path. ;10/9/03 14:24
2 ;;5.2;LAB SERVICE;**295**;Sep 27, 1994
3 Q
4 ;===============================================================
5AP ; from LRPXSXRL
6 ;Build the indexes for LAB DATA - ANATOMIC PATHOLOGY.
7 N ANUMS,DATE,DFN,END,ENTRIES,ETIOL,GLOBAL,I,II,III,ICD,ICDX,IND,ITEM
8 N LRDFN,ORGAN,NE,NERROR,NODE,SNOMED,SPEC,START,SUB,SUBS,TEMP,TENP,TEXT
9 K ANUMS
10 ;Dont leave any old stuff around.
11 S GLOBAL=$$GET1^DID(63,"","","GLOBAL NAME")_"""AP"")"
12 S ENTRIES=$P(^LR(0),U,4)
13 S TENP=ENTRIES/10
14 S TENP=+$P(TENP,".",1)
15 I TENP<1 S TENP=1
16 D BMES^XPDUTL("Building indexes for LAB DATA - ANATOMIC PATH")
17 S TEXT="There are "_ENTRIES_" entries to process."
18 D MES^XPDUTL(TEXT)
19 S START=$H
20 S (IND,NE,NERROR)=0
21 D AANUMS^LRPXSXRB(.ANUMS)
22 S LRDFN=.9
23 F S LRDFN=$O(^LR(LRDFN)) Q:LRDFN<1 D
24 . S TEMP=$G(^LR(LRDFN,0))
25 . I $P(TEMP,U,2)'=2 Q
26 . S DFN=+$P(TEMP,U,3)
27 . I LRDFN'=$$LRDFN^LRPXAPIU(DFN) Q
28 . S IND=IND+1
29 . I IND#TENP=0 D
30 .. S TEXT="Processing entry "_IND
31 .. D MES^XPDUTL(TEXT)
32 . D CYEMSP(LRDFN,DFN,.ANUMS) ; cytology, electron microscopy, sugrical path
33 . S DATE=$$DOD^LRPXAPIU(DFN) I 'DATE Q ; date of death
34 . I '+$G(^LR(LRDFN,"AU")) Q ; date of autopsy
35 . I '($P(^LR(LRDFN,"AU"),U,3)&($P(^("AU"),U,15))) Q ; autopsy comp/released
36 . S SPEC=0
37 . F S SPEC=$O(^LR(LRDFN,33,SPEC)) Q:SPEC<1 D
38 .. I '$L($P($G(^LR(LRDFN,33,SPEC,0)),U)) Q
39 .. S ITEM="A;S;1."_$$UP($P(^LR(LRDFN,33,SPEC,0),U))
40 .. S NODE=LRDFN_";33;"_SPEC_";0"
41 .. D APSET(DFN,ITEM,DATE,NODE)
42 . S ICD=0
43 . F S ICD=$O(^LR(LRDFN,80,ICD)) Q:ICD<1 D
44 .. S ICDX=+$G(^LR(LRDFN,80,ICD,0))
45 .. I 'ICDX Q
46 .. S ITEM="A;I;"_ICDX
47 .. S NODE=LRDFN_";80;"_ICD_";0"
48 .. D APSET(DFN,ITEM,DATE,NODE)
49 . S I=0
50 . F S I=$O(^LR(LRDFN,"AY",I)) Q:I<1 D
51 .. S ORGAN=+$G(^LR(LRDFN,"AY",I,0))
52 .. I 'ORGAN Q
53 .. S ITEM="A;O;"_ORGAN
54 .. S NODE=LRDFN_";AY;"_I_";0"
55 .. D APSET(DFN,ITEM,DATE,NODE)
56 .. F SUBS="1D","2M","3F","4P" D
57 ... S SUB=+SUBS
58 ... S II=0
59 ... F S II=$O(^LR(LRDFN,"AY",I,SUB,II)) Q:II<1 D
60 .... S SNOMED=+$G(^LR(LRDFN,"AY",I,SUB,II,0))
61 .... I 'SNOMED Q
62 .... S ITEM="A;"_$E(SUBS,2)_";"_SNOMED
63 .... S NODE=LRDFN_";AY;"_I_";"_SUB_";"_II_";0"
64 .... D APSET(DFN,ITEM,DATE,NODE)
65 .... I SUB'=2 Q
66 .... S III=0
67 .... F S III=$O(^LR(LRDFN,"AY",I,SUB,II,1,III)) Q:III<1 D
68 ..... S ETIOL=+$G(^LR(LRDFN,"AY",I,SUB,II,1,III,0))
69 ..... I 'ETIOL Q
70 ..... S ITEM="A;E;"_ETIOL
71 ..... S NODE=LRDFN_";AY;"_I_";"_SUB_";"_II_";1;"_III_";0"
72 ..... D APSET(DFN,ITEM,DATE,NODE)
73 S TEXT=NE_" LAB DATA (AP) results indexed."
74 D MES^XPDUTL(TEXT)
75 S END=$H
76 D DETIME^PXRMSXRM(START,END) ; dbia 4113
77 ;If there were errors send a message.
78 I NERROR>0 D ERRMSG^PXRMSXRM(NERROR,GLOBAL) ; dbia 4113
79 ;Send a MailMan message with the results.
80 D COMMSG^PXRMSXRM(GLOBAL,START,END,NE,NERROR) ; dbia 4113
81 Q
82 ;
83CYEMSP(LRDFN,DFN,ANUMS) ;
84 N ACC,APSUB,DATE,ERR,I,ICD,ICDX,ITEM,LRIDT,NODE,ORGAN,PREP,SPEC
85 N TEST,TESTS K TESTS
86 F APSUB="CY","EM","SP" D
87 . I '$D(^LR(LRDFN,APSUB,0)) Q
88 . S LRIDT=0
89 . F S LRIDT=$O(^LR(LRDFN,APSUB,LRIDT)) Q:LRIDT<1 D
90 .. S DATE=+$G(^LR(LRDFN,APSUB,LRIDT,0))
91 .. I 'DATE Q
92 .. S DATE=9999999-LRIDT ; use for multiple entries on a date
93 .. I '($P(^LR(LRDFN,APSUB,LRIDT,0),U,3)&($P(^(0),U,11))) Q
94 .. S SPEC=0
95 .. F S SPEC=$O(^LR(LRDFN,APSUB,LRIDT,.1,SPEC)) Q:SPEC<1 D
96 ... I '$L($P($G(^LR(LRDFN,APSUB,LRIDT,.1,SPEC,0)),U)) Q
97 ... S ITEM="A;S;1."_$$UP($P(^LR(LRDFN,APSUB,LRIDT,.1,SPEC,0),U))
98 ... S NODE=LRDFN_";"_APSUB_";"_LRIDT_";.1;"_SPEC_";0"
99 ... D APSET(DFN,ITEM,DATE,NODE)
100 ... S PREP=0
101 ... F S PREP=$O(^LR(LRDFN,APSUB,LRIDT,.1,SPEC,1,PREP)) Q:PREP<1 D
102 .... S TEST=0
103 .... F S TEST=$O(^LR(LRDFN,APSUB,LRIDT,.1,SPEC,1,PREP,1,TEST)) Q:TEST<1 D
104 ..... S TEST=+$G(^LR(LRDFN,APSUB,LRIDT,.1,SPEC,1,PREP,1,TEST,0))
105 ..... I 'TEST Q
106 ..... S ITEM="A;T;"_TEST
107 ..... S NODE=LRDFN_";"_APSUB_";"_LRIDT_";.1;"_SPEC_";1;"_PREP_";1;"_TEST_";0"
108 ..... D APSET(DFN,ITEM,DATE,NODE)
109 .. ; S ACC=$P(^LR(LRDFN,APSUB,LRIDT,0),U,6) ; do not use tests from acc
110 .. ; I $L(ACC) D
111 .. ; . S NODE=LRDFN_";"_APSUB_";"_LRIDT_";0"
112 .. ; . D ACC^LRPXSXRB(.TESTS,ACC,DATE,.ANUMS,.ERR)
113 .. ; . I 'ERR D
114 .. ; .. S TEST=0
115 .. ; .. F S TEST=$O(TESTS(TEST)) Q:TEST<1 D
116 .. ; ... S ITEM="A;T;"_TEST
117 .. ; ... D APSET(DFN,ITEM,DATE,NODE)
118 .. S ICD=0
119 .. F S ICD=$O(^LR(LRDFN,APSUB,LRIDT,3,ICD)) Q:ICD<1 D
120 ... S ICDX=+$G(^LR(LRDFN,APSUB,LRIDT,3,ICD,0))
121 ... I 'ICDX Q
122 ... S ITEM="A;I;"_ICDX
123 ... S NODE=LRDFN_";"_APSUB_";"_LRIDT_";3;"_ICD_";0"
124 ... D APSET(DFN,ITEM,DATE,NODE)
125 .. S I=0
126 .. F S I=$O(^LR(LRDFN,APSUB,LRIDT,2,I)) Q:I<1 D
127 ... S ORGAN=+$G(^LR(LRDFN,APSUB,LRIDT,2,I,0))
128 ... I 'ORGAN Q
129 ... S ITEM="A;O;"_ORGAN
130 ... S NODE=LRDFN_";"_APSUB_";"_LRIDT_";2;"_I_";0"
131 ... D APSET(DFN,ITEM,DATE,NODE)
132 ... D SNOMED(LRDFN,DFN,LRIDT,DATE,APSUB,I)
133 Q
134 ;
135SNOMED(LRDFN,DFN,LRIDT,DATE,APSUB,I) ;
136 N ETIOL,II,III,ITEM,NODE,SNOMED,SUB,SUBS
137 F SUBS="1D","2M","3F","4P" D
138 . S SUB=+SUBS
139 . S II=0
140 . F S II=$O(^LR(LRDFN,APSUB,LRIDT,2,I,SUB,II)) Q:II<1 D
141 .. S SNOMED=+$G(^LR(LRDFN,APSUB,LRIDT,2,I,SUB,II,0))
142 .. I 'SNOMED Q
143 .. S ITEM="A;"_$E(SUBS,2)_";"_SNOMED
144 .. S NODE=LRDFN_";"_APSUB_";"_LRIDT_";2;"_I_";"_SUB_";"_II_";0"
145 .. D APSET(DFN,ITEM,DATE,NODE)
146 .. I SUB'=2 Q
147 .. S III=0
148 .. F S III=$O(^LR(LRDFN,APSUB,LRIDT,2,I,SUB,II,1,III)) Q:III<1 D
149 ... S ETIOL=+$G(^LR(LRDFN,APSUB,LRIDT,2,I,SUB,II,1,III,0))
150 ... I 'ETIOL Q
151 ... S ITEM="A;E;"_ETIOL
152 ... S NODE=LRDFN_";"_APSUB_";"_LRIDT_";2;"_I_";"_SUB_";"_II_";1;"_III_";0"
153 ... D APSET(DFN,ITEM,DATE,NODE)
154 Q
155 ;
156UP(X) Q $TR(X,"abcdefghijklmnopqrstuvwxyz","ABCDEFGHIJKLMNOPQRSTUVWXYZ")
157 ;
158APSET(DFN,ITEM,DATE,NODE) ;
159 I '$P(ITEM,";",3) D
160 . N ETEXT
161 . S ETEXT=NODE_" missing test"
162 . D ADDERROR^PXRMSXRM("LR(AP",ETEXT,.NERROR) ; dbia 4113
163 E D
164 . D SLAB^LRPX(DFN,DATE,ITEM,NODE)
165 . S NE=NE+1
166 Q
167 ;
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