[507] | 1 | /*
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| 2 | * To change this template, choose Tools | Templates
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| 3 | * and open the template in the editor.
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| 4 | */
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| 5 |
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| 6 | package gov.hhs.fha.nhinc.adaptermpimanager.HL7Parsers;
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| 7 |
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| 8 | import gov.hhs.fha.nhinc.mpilib.*;
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| 9 | import java.util.List;
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| 10 | import java.io.Serializable;
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| 11 | import java.util.Iterator;
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| 12 | import javax.xml.bind.JAXBElement;
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| 13 | import org.apache.commons.logging.Log;
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| 14 | import org.apache.commons.logging.LogFactory;
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| 15 | import org.hl7.v3.*;
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| 16 |
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| 17 | /**
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| 18 | *
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| 19 | * @author jhoppesc
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| 20 | */
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| 21 | public class HL7Parser201303 {
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| 22 | private static Log log = LogFactory.getLog(HL7Parser201303.class);
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| 23 | public static void PrintMessageIdFromMessage(org.hl7.v3.PRPAIN201303UV message) {
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| 24 | if (!(message == null)) {
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| 25 | HL7Parser.PrintId(message.getId(), "message");
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| 26 | }
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| 27 | }
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| 28 |
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| 29 | public static PRPAMT201305UVPatient ExtractHL7PatientFromMessage(org.hl7.v3.PRPAIN201303UV message) {
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| 30 | //assume one subject for now
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| 31 | PRPAMT201305UVPatient patient = null;
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| 32 | log.info("in ExtractPatient");
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| 33 |
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| 34 | if (message != null &&
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| 35 | message.getControlActProcess() != null &&
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| 36 | message.getControlActProcess().getSubject() != null &&
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| 37 | message.getControlActProcess().getSubject().size() > 0) {
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| 38 | List<PRPAIN201303UVMFMIMT700701UV01Subject1> subjects = message.getControlActProcess().getSubject();
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| 39 |
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| 40 | //for now, assume we only need one subject, this will need to be modified later
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| 41 | PRPAIN201303UVMFMIMT700701UV01Subject1 subject = subjects.get(0);
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| 42 |
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| 43 | patient = subject.getRegistrationEvent().getSubject1().getPatient();
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| 44 | } else {
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| 45 | log.info("no message.controlactprocess.subjects");
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| 46 | }
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| 47 |
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| 48 | log.info("done with ExtractPatient");
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| 49 | return patient;
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| 50 | }
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| 51 |
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| 52 | public static String ExtractGender(PRPAMT201305UVPerson person) {
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| 53 | String genderCode = null;
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| 54 | CE administrativeGenderCode = person.getAdministrativeGenderCode();
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| 55 | if (administrativeGenderCode == null) {
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| 56 | log.info("message does not contain a gender code");
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| 57 | } else {
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| 58 | log.info("person.getAdministrativeGenderCode().getCode()=" + person.getAdministrativeGenderCode().getCode());
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| 59 | log.info("person.getAdministrativeGenderCode().getDisplayName()=" + person.getAdministrativeGenderCode().getDisplayName());
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| 60 | genderCode = person.getAdministrativeGenderCode().getCode();
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| 61 | }
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| 62 | return genderCode;
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| 63 | }
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| 64 |
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| 65 | public static String ExtractBirthdate(PRPAMT201305UVPerson person) {
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| 66 | String birthDate = person.getBirthTime().getValue();
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| 67 | if (birthDate == null) {
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| 68 | log.info("message does not contain a birthtime");
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| 69 | } else {
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| 70 | log.info("person.getBirthTime().getValue()=" + birthDate);
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| 71 | }
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| 72 | return birthDate;
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| 73 | }
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| 74 |
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| 75 | public static PersonName ExtractPersonName(PRPAMT201305UVPerson person) {
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| 76 | //temp logic to prove i can get to name - long term would want to store discrete name parts
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| 77 | //also assume one name, not multiple names
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| 78 | PersonName personname = new PersonName();
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| 79 |
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| 80 | log.info("patientPerson.getName().size() " + person.getName().size());
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| 81 | if (person.getName() != null &&
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| 82 | person.getName().size() > 0 &&
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| 83 | person.getName().get(0) != null &&
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| 84 | person.getName().get(0).getContent() != null) {
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| 85 |
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| 86 | List<Serializable> choice = person.getName().get(0).getContent();
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| 87 | Iterator<Serializable> iterSerialObjects = choice.iterator();
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| 88 |
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| 89 | String nameString = null;
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| 90 | EnExplicitFamily lastname = new EnExplicitFamily();
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| 91 | EnExplicitGiven firstname = new EnExplicitGiven();
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| 92 |
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| 93 | while (iterSerialObjects.hasNext()) {
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| 94 | Serializable contentItem = iterSerialObjects.next();
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| 95 |
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| 96 | if (contentItem instanceof String) {
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| 97 | String strValue = (String) contentItem;
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| 98 |
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| 99 | if (nameString != null) {
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| 100 | nameString += strValue;
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| 101 | } else {
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| 102 | nameString = strValue;
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| 103 | }
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| 104 | } else if (contentItem instanceof JAXBElement) {
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| 105 | JAXBElement oJAXBElement = (JAXBElement) contentItem;
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| 106 |
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| 107 | if (oJAXBElement.getValue() instanceof EnExplicitFamily) {
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| 108 | lastname = (EnExplicitFamily) oJAXBElement.getValue();
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| 109 | } else if (oJAXBElement.getValue() instanceof EnExplicitGiven) {
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| 110 | firstname = (EnExplicitGiven) oJAXBElement.getValue();
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| 111 | }
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| 112 | }
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| 113 | }
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| 114 |
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| 115 | // If text string in patient name, then set in name
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| 116 | // else set in element.
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| 117 | if (nameString != null) {
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| 118 | personname.setLastName(nameString);
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| 119 | } else {
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| 120 | if (lastname.getContent() != null &&
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| 121 | lastname.getContent().length() > 0) {
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| 122 | personname.setLastName(lastname.getContent());
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| 123 | log.info("FamilyName : " + personname.getLastName());
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| 124 | }
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| 125 |
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| 126 | if (firstname.getContent() != null &&
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| 127 | firstname.getContent().length() > 0) {
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| 128 | personname.setFirstName(firstname.getContent());
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| 129 | log.info("GivenName : " + personname.getFirstName());
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| 130 | }
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| 131 | }
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| 132 | }
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| 133 |
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| 134 | return personname;
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| 135 | }
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| 136 |
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| 137 | public static Identifiers ExtractPersonIdentifiers(PRPAMT201305UVPatient patient) {
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| 138 | Identifiers ids = new Identifiers();
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| 139 | for (II patientid : patient.getId()) {
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| 140 | Identifier id = new Identifier();
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| 141 | id.setId(patientid.getExtension());
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| 142 | id.setOrganizationId(patientid.getRoot());
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| 143 | log.info("Created id from patient identifier [organization=" + id.getOrganizationId() + "][id=" + id.getId() + "]");
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| 144 | ids.add(id);
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| 145 | }
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| 146 |
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| 147 | PRPAMT201305UVPerson person = ExtractHL7PatientPersonFromHL7Patient(patient);
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| 148 | for (II personid : person.getId()) {
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| 149 | Identifier id = new Identifier();
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| 150 | id.setId(personid.getExtension());
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| 151 | id.setOrganizationId(personid.getRoot());
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| 152 | log.info("Created id from person identifier [organization=" + id.getOrganizationId() + "][id=" + id.getId() + "]");
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| 153 | ids.add(id);
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| 154 | }
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| 155 |
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| 156 | return ids;
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| 157 | }
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| 158 |
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| 159 | public static PRPAMT201305UVPerson ExtractHL7PatientPersonFromHL7Patient(PRPAMT201305UVPatient patient) {
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| 160 | JAXBElement<PRPAMT201305UVPerson> patientPersonElement = patient.getPatientPerson();
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| 161 | PRPAMT201305UVPerson patientPerson = patientPerson = patientPersonElement.getValue();
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| 162 | return patientPerson;
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| 163 | }
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| 164 |
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| 165 | public static Patient ExtractMpiPatientFromHL7Patient(PRPAMT201305UVPatient patient) {
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| 166 | PRPAMT201305UVPerson patientPerson = ExtractHL7PatientPersonFromHL7Patient(patient);
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| 167 | Patient mpiPatient = new Patient();
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| 168 | mpiPatient.setName(ExtractPersonName(patientPerson));
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| 169 | mpiPatient.setGender(ExtractGender(patientPerson));
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| 170 | mpiPatient.setDateOfBirth(ExtractBirthdate(patientPerson));
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| 171 |
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| 172 | Identifiers ids = ExtractPersonIdentifiers(patient);
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| 173 | mpiPatient.setIdentifiers(ids);
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| 174 | return mpiPatient;
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| 175 | }
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| 176 | }
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