source: ccr/trunk/p/C0CIN.m@ 615

C0CIN     ; CCDCCR/GPL - CCR IMPORT utilities; 9/20/08
 ;;1.0;C0C;;Sep 20, 2009;
 ;Copyright 2009 George Lilly.  Licensed under the terms of the GNU
 ;General Public License See attached copy of the License.
 ;
 ;This program is free software; you can redistribute it and/or modify
 ;it under the terms of the GNU General Public License as published by
 ;the Free Software Foundation; either version 2 of the License, or
 ;(at your option) any later version.
 ;
 ;This program is distributed in the hope that it will be useful,
 ;but WITHOUT ANY WARRANTY; without even the implied warranty of
 ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 ;GNU General Public License for more details.
 ;
 ;You should have received a copy of the GNU General Public License along
 ;with this program; if not, write to the Free Software Foundation, Inc.,
 ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 ;
 W "This is the CCR Import Utility Library ",!
 Q
 ;
TEST ; TESTS BOTH ROUTINES AT ONCE
 N ZI,ZJ
 S ZI="/home/vademo2/CCR" ;directory purposely leaving off the trailing /
 S ZJ="PAT_358_CCR_V1_0_21.xml" ; random test patient
 D RPCFIN(.GPL,358,"GPLTEST","CCR",ZJ,ZI)
 Q
 ;
RPCAIN(RTN,DFN,SOURCE,TYPE,ARY) ; ARRAY IN RPC - ACCEPT AN XML DOCUMENT
 ; AND STORE IT IN THE INCOMING XML FILE
 ; RETURNS THE IEN OF THE RECORD OR TEXT IF THERE IS AN ERROR
 I $G(DFN)="" S RTN="DFN NOT DEFINED" Q  ;
 N C0CXF S C0CXF=175 ; FILE NUMBER FOR INCOMING XML FILE
 N C0CFDA,ZX
 S C0CFDA(C0CXF,"+1,",.01)=DFN ; PATIENT
 S C0CFDA(C0CXF,"+1,",1)=$$NOW^XLFDT ;DATE
 S C0CFDA(C0CXF,"+1,",2)=TYPE  ;TYPE
 S C0CFDA(C0CXF,"+1,",3)=$$ADDSRC(SOURCE) ;SOURCE
 S C0CFDA(C0CXF,"+1,",7)="NEW" ; STATUS OF NEW FOR NOT PROCESSED
 D UPDIE ; CREATE THE RECORD
 S ZX=C0CIEN(1) ; CAPTURE THE RECORD NUMBER
 D WP^DIE(C0CXF,ZX_",",4,,ARY,"ZERR")
 ;W "RECORD:",ZX,!
 S RTN=ZX ; RETURN IEN OF THE XML FILE
 Q
 ;
ADDSRC(ZSRC) ;EXTRISIC TO ADD A SOURCE TO THE CCR SOURCE FILE
 ; RETURNS RECORD NUMBER. IF SOURCE EXISTS, JUST RETURNS IT'S RECORD NUMBER
 ;
 N ZX,ZF,C0CFDA
 S ZF=171.401 ; FILE NUMBER FOR CCR SOURCE FILE
 S C0CFDA(ZF,"?+1,",.01)=ZSRC
 D UPDIE
 Q $O(^C0C(171.401,"B",ZSRC,""))
 ;
RPCFIN(RTN,DFN,SOURCE,TYPE,FN,FP) ; FILE IN RPC - READ AN XML DOCUMENT
 ; FROM A HOST FILE AND STORE IT IN THE INCOMING XML FILE
 N ZX,ZTMP
 I $E($RE(FP))'="/" S ZX=FP_"/"
 E  S ZX=FP
 S ZX=ZX_FN
 D LOAD("ZTMP",ZX)
 I '$D(ZTMP) D  Q  ; NO LUCK
 . W "FILE NOT LOADED",!
 D RPCAIN(.RTN,DFN,SOURCE,TYPE,"ZTMP")
 N C0CFDA
 S C0CFDA(175,RTN_",",5)=FN ; FILE NAME
 S C0CFDA(175,RTN_",",6)=FP ; FILE PATH
 D UPDIE ; UPDATE WITH FILE NAME AND PATH
 Q
 ;
RPCLIST(RTN,DFN) ; CCR LIST - LIST XML DOCUMENTS FOR PATIENT DFN
 ; THAT ARE STORED IN THE INCOMING XML FILE
 ; RETURNS AN ARRAY OF THE FORM 
 ; RTN(x)="IEN^DATE^TYPE^SOURCE^STATUS" WHERE
 ; IEN IS THE RECORD NUMBER OF THE XML DOCUMENT
 ; DATE IS THE DATE THE DOCUMENT WAS STORED IN THE FILE
 ; TYPE IS "CCD" OR "CCR" OR "OTHER"
 ; SOURCE IS THE NAME OF THE DOCUMENT SOURCE FROM THE CCR SOURCE FILE
 ; STATUS IS THE STATUS OF THE DOCUMENT (VALUES TO BE DEFINED)
 N ZF S ZF=175 ; FILE NUMBER OF INCOMING XML FILE
 N ZI S ZI=""
 N ZN S ZN=0
 F  S ZI=$O(^C0CIN("B",DFN,ZI),-1) Q:ZI=""  D  ; FOR EACH RECORD FOR THIS PATIENT
 . S ZN=ZN+1 ;INCREMENT COUNT OF RETURN ARRAY
 . S $P(RTN(ZN),"^",1)=ZI ; IEN OF RECORD
 . S $P(RTN(ZN),"^",2)=$$GET1^DIQ(ZF,ZI_",",1,"E") ;DATE
 . S $P(RTN(ZN),"^",3)=$$GET1^DIQ(ZF,ZI_",",2,"E") ;TYPE
 . S $P(RTN(ZN),"^",4)=$$GET1^DIQ(ZF,ZI_",",3,"E") ;SOURCE
 . S $P(RTN(ZN),"^",5)=$$GET1^DIQ(ZF,ZI_",",7,"I") ; STATUS
 Q
 ;
RPCDOC(RTN,IEN) ; RETRIEVE DOCUMENT NUMBER IEN FROM THE INCOMING XML FILE
 ; RETURNED IN ARRAY RTN
 N ZI
 S ZI=$$GET1^DIQ(175,IEN_",",4,,"RTN")
 Q
 ;
EN(INXML,SOURCE,C0CDFN) ; IMPORT A CCR, PASSED BY NAME INXML
 ; FILE UNDER SOURCE, WHICH IS A POINTER TO THE CCR SOURCE FILE
 ; FOR PATIENT C0CDFN
 ;N C0CXP
 S C0CINB=$NA(^TMP("C0CIN",$J,"VARS",C0CDFN))
 S C0CDOCID=$$PARSE^C0CMXML(INXML) ;W !,"DocID: ",C0CDOCID
 ;S REDUX="//ContinuityOfCareRecord/Body"
 S REDUX=""
 D XPATH^C0CMXML(1,"/","C0CIDX","C0CXP",,REDUX)
 ;D INDEX^C0CXPATH(INXML,"C0CXP",-1) ; GENERATE XPATHS FROM THE CCR
 ;N ZI,ZJ,ZK 
 S ZI=""
 F  S ZI=$O(C0CXP(ZI)) Q:ZI=""  D  ; FOR EACH XPATH
 . D DEMUX("ZJ",ZI) ;
 . W ZJ,!
 . S ZK=$P(ZJ,"^",3) ; PULL OUT THE XPATH
 . S ZM=$P(ZJ,"^",1) ; PULL OUT THE MULTIPLE
 . S ZS=$P(ZJ,"^",2) ; PULL OUT THE SUBMULTIPLE
 . S C0CDICN=$O(^C0CDIC(170,"XPATH",ZK,""))
 . I C0CDICN="" D  Q  ;
 . . W "MISSING XPATH:",!,ZK,! ; OOPS, XPATH NOT IN C0CDIC
 . . S MISSING(ZK)=""
 . ;D GETS^DIQ(170,C0CDICN_",","*",,"C0CFDA")
 . S C0CVAR=$$GET1^DIQ(170,C0CDICN_",",.01) ; VARIABLE NAME
 . S C0CSEC=$$GET1^DIQ(170,C0CDICN_",",12) ;ELEMENT TYPE
 . W C0CSEC,":",C0CVAR,!
 Q
 ; 
GETACCR(AOUT,C0CDFN) ; EXTRACT A CCR FOR PATIENT ADFN AND PUT IT IN ARRAY AOUT
 ;PASSED BY NAME
 N ZT
 D CCRRPC^C0CCCR(.ZT,C0CDFN,"LABLIMIT:T-1000")
 M @AOUT=ZT
 Q
 ;
DEMUX(OUTX,INX) ;PARSES XPATH PASSED BY VALUE IN INX TO REMOVE [x] MULTIPLES
 ; RETURNS OUTX: MULTIPLE^SUBMULTIPLE^XPATH 
 N ZX,ZY,ZZ,ZZ1,ZMULT,ZSUB
 S (ZMULT,ZSUB)=""
 S ZX=$P(INX,"[",2)
 I ZX'="" D  ; THERE IS A [x] MULTIPLE
 . S ZY=$P(INX,"[",1) ;FIRST PART OF XPATH
 . S ZMULT=$P(ZX,"]",1) ; NUMBER OF THE MULTIPLE
 . S ZX=ZY_$P(ZX,"]",2) ; REST OF THE XPATH
 . I $P(ZX,"[",2)'="" D  ; A SUB MULTIPLE EXISTS
 . . S ZZ=$P(ZX,"[",1) ; FIRST PART OF XPATH
 . . S ZX=$P(ZX,"[",2) ; DELETE THE [
 . . S ZSUB=$P(ZX,"]",1) ; NUMBER OF THE SUBMULTIPLE
 . . S ZX=ZZ_$P(ZX,"]",2) ; REST OF THE XPATH
 E  S ZX=INX ;NO MULTIPLE HERE
 S @OUTX=ZMULT_"^"_ZSUB_"^"_ZX ;RETURN MULTIPLE^SUBMULTIPLE^XPATH
 Q
 ;
TEST64 ;TEST BASE64 DECODING FOR IMPORTING CCR FROM THE NHIN
 W $$FTG^%ZISH("/tmp/","base64_encoded_ccr.txt","G64(1)",1)
 S G=G64(1)
 S ZI=""
 F  S ZI=$O(G64(1,"OVF",ZI)) Q:ZI=""  D  ; FOR EVERY OVERFLOW RECORD
 . S G=G_G64(1,"OVF",ZI) ;HOPE IT'S NOT TOO BIG
 S G2=$$DECODE^RGUTUU(G)
 Q
 ;
NORMAL(OUTXML,INXML) ;NORMALIZES AN XML STRING PASSED BY NAME IN INXML
 ; INTO AN XML ARRAY RETURNED IN OUTXML, ALSO PASSED BY NAME
 ;
 N ZI,ZN,ZTMP
 S ZN=1
 S @OUTXML@(ZN)=$P(@INXML,"><",ZN)_">"
 S ZN=ZN+1
 F  S @OUTXML@(ZN)="<"_$P(@INXML,"><",ZN) Q:$P(@INXML,"><",ZN+1)=""  D  ;
 . S @OUTXML@(ZN)=@OUTXML@(ZN)_">"
 . S ZN=ZN+1
 Q
 ;
CLEANCR(OUTXML,INXML) ; USE $C(10) TO SEPARATE THE STRING INXML INTO
 ;AN ARRAY OUTXML(n) OUTXML AND INXML PASSED BY NAME
 N ZX,ZY,ZN
 S ZX=1,ZN=1
 F  S ZY=$F(@INXML,$C(10),ZX) Q:ZY=0  D  ;
 . S @OUTXML@(ZN)=$E(G2,ZX,ZY-2)
 . I @OUTXML@(ZN)'="" S ZN=ZN+1
 . S ZX=ZY
 Q
 ;
LOAD(ZRTN,filepath) ; load an xml file into the ZRTN array, passed by name
 n i
 D  ;
 . n zfile,zpath,ztmp,zok s (zfile,zpath,ztmp)=""
 . s ztmp=$na(^TMP("C0CLOAD",$J))
 . k @ztmp
 . s zfile=$re($p($re(filepath),"/",1)) ;file name
 . s zpath=$p(filepath,zfile,1) ; file path
 . s zok=$$FTG^%ZISH(zpath,zfile,$NA(@ztmp@(1)),3) ; import the file incr sub 3
 . m @ZRTN=@ztmp
 . k @ztmp
 . s i=$o(@ZRTN@(""),-1) ; highest line number
 q
 ;
UPDIE   ; INTERNAL ROUTINE TO CALL UPDATE^DIE AND CHECK FOR ERRORS
 K ZERR,C0CIEN
 D CLEAN^DILF
 D UPDATE^DIE("","C0CFDA","C0CIEN","ZERR")
 I $D(ZERR) D  ;
 . W "ERROR",!
 . ZWR ZERR
 . B
 K C0CFDA
 Q
 ;