source: ccr/trunk/p/C0CIN.m@ 1767

Last change on this file since 1767 was 1586, checked in by Sam Habiel, 12 years ago

Changed license to AGPL. Some clean-up for XINDEX

  • Property svn:mergeinfo set to (toggle deleted branches)
    /ccr/branches/ohum/o-old/p/C0CIN.m1290
    /ccr/branches/ohum/p/C0CIN.m1291-1543
    /ccr/branches/ohum/p/p/C0CIN.m1287-1289
File size: 6.4 KB
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1C0CIN ; CCDCCR/GPL - CCR IMPORT utilities; 9/20/08
2 ;;1.2;CCD/CCR GENERATION UTILITIES;;Oct 30, 2012;Build 50
3 ;Copyright 2009 George Lilly.
4 ;
5 ; This program is free software: you can redistribute it and/or modify
6 ; it under the terms of the GNU Affero General Public License as
7 ; published by the Free Software Foundation, either version 3 of the
8 ; License, or (at your option) any later version.
9 ;
10 ; This program is distributed in the hope that it will be useful,
11 ; but WITHOUT ANY WARRANTY; without even the implied warranty of
12 ; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
13 ; GNU Affero General Public License for more details.
14 ;
15 ; You should have received a copy of the GNU Affero General Public License
16 ; along with this program. If not, see <http://www.gnu.org/licenses/>.
17 ;
18 W "This is the CCR Import Utility Library ",!
19 Q
20 ;
21TEST ; TESTS BOTH ROUTINES AT ONCE
22 N ZI,ZJ
23 S ZI="/home/vademo2/CCR" ;directory purposely leaving off the trailing /
24 S ZJ="PAT_358_CCR_V1_0_21.xml" ; random test patient
25 D RPCFIN(.GPL,358,135,"GPLTEST","CCR",ZJ,ZI)
26 Q
27 ;
28RPCAIN(RTN,DFN,DUZ,SOURCE,TYPE,ARY) ; ARRAY IN RPC - ACCEPT AN XML DOCUMENT
29 ; AND STORE IT IN THE INCOMING XML FILE
30 ; RETURNS THE IEN OF THE RECORD OR TEXT IF THERE IS AN ERROR
31 I $G(DFN)="" S RTN="DFN NOT DEFINED" Q ;
32 N C0CXF S C0CXF=175 ; FILE NUMBER FOR INCOMING XML FILE
33 N C0CFDA,ZX
34 S C0CFDA(C0CXF,"+1,",.01)=DFN ; PATIENT
35 S C0CFDA(C0CXF,"+1,",.02)=DUZ ; PROVIDER CREATING THE RECORD
36 S C0CFDA(C0CXF,"+1,",1)=$$NOW^XLFDT ;DATE
37 S C0CFDA(C0CXF,"+1,",2)=TYPE ;TYPE
38 S C0CFDA(C0CXF,"+1,",3)=$$ADDSRC(SOURCE) ;SOURCE
39 S C0CFDA(C0CXF,"+1,",7)="NEW" ; STATUS OF NEW FOR NOT PROCESSED
40 D UPDIE ; CREATE THE RECORD
41 S ZX=C0CIEN(1) ; CAPTURE THE RECORD NUMBER
42 D WP^DIE(C0CXF,ZX_",",4,,ARY,"ZERR")
43 ;W "RECORD:",ZX,!
44 S RTN=ZX ; RETURN IEN OF THE XML FILE
45 Q
46 ;
47ADDSRC(ZSRC) ;EXTRISIC TO ADD A SOURCE TO THE CCR SOURCE FILE
48 ; RETURNS RECORD NUMBER. IF SOURCE EXISTS, JUST RETURNS IT'S RECORD NUMBER
49 ;
50 N ZX,ZF,C0CFDA
51 S ZF=171.401 ; FILE NUMBER FOR CCR SOURCE FILE
52 S C0CFDA(ZF,"?+1,",.01)=ZSRC
53 D UPDIE
54 Q $O(^C0C(171.401,"B",ZSRC,""))
55 ;
56RPCFIN(RTN,DFN,DUZ,SOURCE,TYPE,FN,FP) ; FILE IN RPC - READ AN XML DOCUMENT
57 ; FROM A HOST FILE AND STORE IT IN THE INCOMING XML FILE
58 N ZX,ZTMP
59 I $E($RE(FP))'="/" S ZX=FP_"/"
60 E S ZX=FP
61 S ZX=ZX_FN
62 D LOAD("ZTMP",ZX)
63 I '$D(ZTMP) D Q ; NO LUCK
64 . W "FILE NOT LOADED",!
65 D RPCAIN(.RTN,DFN,DUZ,SOURCE,TYPE,"ZTMP")
66 N C0CFDA
67 S C0CFDA(175,RTN_",",5)=FN ; FILE NAME
68 S C0CFDA(175,RTN_",",6)=FP ; FILE PATH
69 D UPDIE ; UPDATE WITH FILE NAME AND PATH
70 Q
71 ;
72RPCLIST(RTN,DFN) ; CCR LIST - LIST XML DOCUMENTS FOR PATIENT DFN
73 ; THAT ARE STORED IN THE INCOMING XML FILE
74 ; RETURNS AN ARRAY OF THE FORM
75 ; RTN(x)="IEN^DATE^TYPE^SOURCE^STATUS^CREATEDBY" WHERE
76 ; IEN IS THE RECORD NUMBER OF THE XML DOCUMENT
77 ; DATE IS THE DATE THE DOCUMENT WAS STORED IN THE FILE
78 ; TYPE IS "CCD" OR "CCR" OR "OTHER"
79 ; SOURCE IS THE NAME OF THE DOCUMENT SOURCE FROM THE CCR SOURCE FILE
80 ; STATUS IS THE STATUS OF THE DOCUMENT (VALUES TO BE DEFINED)
81 ; CREATEDBY IS THE NAME OF THE PROVIDER WHO UPLOADED THE XML
82 N ZF S ZF=175 ; FILE NUMBER OF INCOMING XML FILE
83 N ZI S ZI=""
84 N ZN S ZN=0
85 F S ZI=$O(^C0CIN("B",DFN,ZI),-1) Q:ZI="" D ; FOR EACH RECORD FOR THIS PATIENT
86 . S ZN=ZN+1 ;INCREMENT COUNT OF RETURN ARRAY
87 . S $P(RTN(ZN),"^",1)=ZI ; IEN OF RECORD
88 . S $P(RTN(ZN),"^",2)=$$GET1^DIQ(ZF,ZI_",",1,"E") ;DATE
89 . S $P(RTN(ZN),"^",3)=$$GET1^DIQ(ZF,ZI_",",2,"E") ;TYPE
90 . S $P(RTN(ZN),"^",4)=$$GET1^DIQ(ZF,ZI_",",3,"E") ;SOURCE
91 . S $P(RTN(ZN),"^",5)=$$GET1^DIQ(ZF,ZI_",",7,"I") ; STATUS
92 . S $P(RTN(ZN),"^",6)=$$GET1^DIQ(ZF,ZI_",",.02,"E") ; CREATED BY
93 Q
94 ;
95RPCDOC(RTN,IEN) ; RETRIEVE DOCUMENT NUMBER IEN FROM THE INCOMING XML FILE
96 ; RETURNED IN ARRAY RTN
97 N ZI
98 S ZI=$$GET1^DIQ(175,IEN_",",4,,"RTN")
99 Q
100 ;
101EN(INXML,SOURCE,C0CDFN) ; IMPORT A CCR, PASSED BY NAME INXML
102 ; FILE UNDER SOURCE, WHICH IS A POINTER TO THE CCR SOURCE FILE
103 ; FOR PATIENT C0CDFN
104 ;N C0CXP
105 S C0CINB=$NA(^TMP("C0CIN",$J,"VARS",C0CDFN))
106 S C0CDOCID=$$PARSE^C0CMXML(INXML) ;W !,"DocID: ",C0CDOCID
107 ;S REDUX="//ContinuityOfCareRecord/Body"
108 S REDUX=""
109 D XPATH^C0CMXML(1,"/","C0CIDX","C0CXP",,REDUX)
110 ;D INDEX^C0CXPATH(INXML,"C0CXP",-1) ; GENERATE XPATHS FROM THE CCR
111 ;N ZI,ZJ,ZK
112 S ZI=""
113 F S ZI=$O(C0CXP(ZI)) Q:ZI="" D ; FOR EACH XPATH
114 . D DEMUX^C0CMXP("ZJ",ZI) ;
115 . W ZJ,!
116 . S ZK=$P(ZJ,"^",3) ; PULL OUT THE XPATH
117 . S ZM=$P(ZJ,"^",1) ; PULL OUT THE MULTIPLE
118 . S ZS=$P(ZJ,"^",2) ; PULL OUT THE SUBMULTIPLE
119 . S C0CDICN=$O(^C0CDIC(170,"XPATH",ZK,""))
120 . I C0CDICN="" D Q ;
121 . . W "MISSING XPATH:",!,ZK,! ; OOPS, XPATH NOT IN C0CDIC
122 . . S MISSING(ZK)=""
123 . ;D GETS^DIQ(170,C0CDICN_",","*",,"C0CFDA")
124 . S C0CVAR=$$GET1^DIQ(170,C0CDICN_",",.01) ; VARIABLE NAME
125 . S C0CSEC=$$GET1^DIQ(170,C0CDICN_",",12) ;ELEMENT TYPE
126 . W C0CSEC,":",C0CVAR,!
127 Q
128 ;
129GETACCR(AOUT,C0CDFN) ; EXTRACT A CCR FOR PATIENT ADFN AND PUT IT IN ARRAY AOUT
130 ;PASSED BY NAME
131 N ZT
132 D CCRRPC^C0CCCR(.ZT,C0CDFN,"LABLIMIT:T-1000")
133 M @AOUT=ZT
134 Q
135 ;
136TEST64 ;TEST BASE64 DECODING FOR IMPORTING CCR FROM THE NHIN
137 W $$FTG^%ZISH("/tmp/","base64_encoded_ccr.txt","G64(1)",1)
138 S G=G64(1)
139 S ZI=""
140 F S ZI=$O(G64(1,"OVF",ZI)) Q:ZI="" D ; FOR EVERY OVERFLOW RECORD
141 . S G=G_G64(1,"OVF",ZI) ;HOPE IT'S NOT TOO BIG
142 S G2=$$DECODE^RGUTUU(G)
143 Q
144 ;
145NORMAL(OUTXML,INXML) ;NORMALIZES AN XML STRING PASSED BY NAME IN INXML
146 ; INTO AN XML ARRAY RETURNED IN OUTXML, ALSO PASSED BY NAME
147 ;
148 N ZI,ZN,ZTMP
149 S ZN=1
150 S @OUTXML@(ZN)=$P(@INXML,"><",ZN)_">"
151 S ZN=ZN+1
152 F S @OUTXML@(ZN)="<"_$P(@INXML,"><",ZN) Q:$P(@INXML,"><",ZN+1)="" D ;
153 . S @OUTXML@(ZN)=@OUTXML@(ZN)_">"
154 . S ZN=ZN+1
155 Q
156 ;
157CLEANCR(OUTXML,INXML) ; USE $C(10) TO SEPARATE THE STRING INXML INTO
158 ;AN ARRAY OUTXML(n) OUTXML AND INXML PASSED BY NAME
159 N ZX,ZY,ZN
160 S ZX=1,ZN=1
161 F S ZY=$F(@INXML,$C(10),ZX) Q:ZY=0 D ;
162 . S @OUTXML@(ZN)=$E(G2,ZX,ZY-2)
163 . I @OUTXML@(ZN)'="" S ZN=ZN+1
164 . S ZX=ZY
165 Q
166 ;
167LOAD(ZRTN,filepath) ; load an xml file into the ZRTN array, passed by name
168 n i
169 D ;
170 . n zfile,zpath,ztmp,zok s (zfile,zpath,ztmp)=""
171 . s ztmp=$na(^TMP("C0CLOAD",$J))
172 . k @ztmp
173 . s zfile=$re($p($re(filepath),"/",1)) ;file name
174 . s zpath=$p(filepath,zfile,1) ; file path
175 . s zok=$$FTG^%ZISH(zpath,zfile,$NA(@ztmp@(1)),3) ; import the file incr sub 3
176 . m @ZRTN=@ztmp
177 . k @ztmp
178 . s i=$o(@ZRTN@(""),-1) ; highest line number
179 q
180 ;
181UPDIE ; INTERNAL ROUTINE TO CALL UPDATE^DIE AND CHECK FOR ERRORS
182 K ZERR,C0CIEN
183 D CLEAN^DILF
184 D UPDATE^DIE("","C0CFDA","C0CIEN","ZERR")
185 I $D(ZERR) S $EC=",U1,"
186 K C0CFDA
187 Q
188 ;
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