C0CMCCD ; GPL - MXML based CCD utilities;12/04/09 17:05 ;;1.2;CCD/CCR GENERATION UTILITIES;;Oct 30, 2012;Build 50 ;Copyright 2009 George Lilly. ; ; This program is free software: you can redistribute it and/or modify ; it under the terms of the GNU Affero General Public License as ; published by the Free Software Foundation, either version 3 of the ; License, or (at your option) any later version. ; ; This program is distributed in the hope that it will be useful, ; but WITHOUT ANY WARRANTY; without even the implied warranty of ; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ; GNU Affero General Public License for more details. ; ; You should have received a copy of the GNU Affero General Public License ; along with this program. If not, see . ; Q ; PARSCCD(DOC,OPTION) ; THIS WAS COPIED FROM EN^MXMLDOM TO CUSTIMIZE FOR ; PROCESSING CCDS N CBK,SUCCESS,LEVEL,NODE,HANDLE K ^TMP("MXMLERR",$J) L +^TMP("MXMLDOM",$J):5 E Q 0 S HANDLE=$O(^TMP("MXMLDOM",$J,""),-1)+1,^(HANDLE)="" L -^TMP("MXMLDOM",$J) S CBK("STARTELEMENT")="STARTELE^C0CMCCD" ; ONLY THIS ONE IS CHANGED ;GPL S CBK("ENDELEMENT")="ENDELE^MXMLDOM" S CBK("COMMENT")="COMMENT^MXMLDOM" S CBK("CHARACTERS")="CHAR^MXMLDOM" S CBK("ENDDOCUMENT")="ENDDOC^MXMLDOM" S CBK("ERROR")="ERROR^MXMLDOM" S (SUCCESS,LEVEL,LEVEL(0),NODE)=0,OPTION=$G(OPTION,"V1") D EN^MXMLPRSE(DOC,.CBK,OPTION) D:'SUCCESS DELETE^MXMLDOM(HANDLE) Q $S(SUCCESS:HANDLE,1:0) ; Start element ; Create new child node and push info on stack STARTELE(ELE,ATTR) ; COPIED FROM STARTELE^MXMLDOM AND MODIFIED TO TREAT ; ATTRIBUTES AS SUBELEMENTS TO MAKE CCD XPATH PROCESSING EASIER N PARENT S PARENT=LEVEL(LEVEL),NODE=NODE+1 S:PARENT ^TMP("MXMLDOM",$J,HANDLE,PARENT,"C",NODE)=ELE S LEVEL=LEVEL+1,LEVEL(LEVEL)=NODE,LEVEL(LEVEL,0)=ELE S ^TMP("MXMLDOM",$J,HANDLE,NODE)=ELE,^(NODE,"P")=PARENT ;M ^("A")=ATTR N ZI S ZI="" ; INDEX FOR ATTR F S ZI=$O(ATTR(ZI)) Q:ZI="" D ; FOR EACH ATTRIBUTE . N ELE,TXT ; ABOUT TO RECURSE . S ELE=ZI ; TAG . S TXT=ATTR(ZI) ; DATA . D STARTELE(ELE,"") ; CREATE A NEW SUBNODE . D TXT^MXMLDOM("T") ; INSERT DATA TO TAG . D ENDELE^MXMLDOM(ELE) ; POP BACK UP A LEVEL Q ; ISMULT(ZOID) ; RETURN TRUE IF ZOID IS ONE OF A MULTIPLE N ZN ;I $$TAG(ZOID)["entry" B S ZN=$$NXTSIB(ZOID) I ZN'="" Q $$TAG(ZOID)=$$TAG(ZN) ; IF TAG IS THE SAME AS NEXT SIB TAG Q 0 ; FIRST(ZOID) ;RETURNS THE OID OF THE FIRST CHILD OF ZOID Q $$CHILD^MXMLDOM(C0CDOCID,ZOID) ; PARENT(ZOID) ;RETURNS THE OID OF THE PARENT OF ZOID Q $$PARENT^MXMLDOM(C0CDOCID,ZOID) ; ATT(RTN,NODE) ;GET ATTRIBUTES FOR ZOID S HANDLE=C0CDOCID K @RTN D GETTXT^MXMLDOM("A") Q ; TAG(ZOID) ; RETURNS THE XML TAG FOR THE NODE ;I ZOID=149 B ;GPLTEST N X,Y S Y="" S X=$G(C0CCBK("TAG")) ;IS THERE A CALLBACK FOR THIS ROUTINE I X'="" X X ; EXECUTE THE CALLBACK, SHOULD SET Y I Y="" S Y=$$NAME^MXMLDOM(C0CDOCID,ZOID) Q Y ; NXTSIB(ZOID) ; RETURNS THE NEXT SIBLING Q $$SIBLING^MXMLDOM(C0CDOCID,ZOID) ; DATA(ZT,ZOID) ; RETURNS DATA FOR THE NODE ;N ZT,ZN S ZT="" ;S C0CDOM=$NA(^TMP("MXMLDOM",$J,C0CDOCID)) ;Q $G(@C0CDOM@(ZOID,"T",1)) S ZN=$$TEXT^MXMLDOM(C0CDOCID,ZOID,ZT) Q ; CLEANARY(OUTARY,INARY) ; GOES THROUGH AN ARRAY AND CALLS CLEAN ON EACH NODE ; INARY AND OUTARY PASSED BY NAME N ZI S ZI="" F S ZI=$O(@INARY@(ZI)) Q:ZI="" D ; FOR EACH NODE . S @OUTARY@(ZI)=$$CLEAN(@INARY@(ZI)) ; CLEAN THE NODE Q ; CLEAN(STR) ; extrinsic function; returns string ;; Removes all non printable characters from a string. ;; STR by Value N TR,I F I=0:1:31 S TR=$G(TR)_$C(I) S TR=TR_$C(127) QUIT $TR(STR,TR) ; STRIPTXT(OUTARY,ZARY) ; STRIPS THE "TEXT" PORTION OUT OF AN XML FILE ; THIS IS USED TO DELETE THE NARATIVE HTML OUT OF THE CCD XML FILES BECAUSE ; THEY DO NOT WORK RIGHT WITH THE PARSER ;N ZWRK,ZBLD,ZI ; WORK ARRAY,BUILD ARRAY, AND COUNTER S ZI=$O(@ZARY@("")) ; GET FIRST LINE NUMBER D C0CBEGIN("ZWRK",ZI) ; INSERT FIRST LINE IN WORK ARRAY F S ZI=$O(@ZARY@(ZI)) Q:ZI="" D ; FOR EACH LINE OF THE ARRAY . I $O(@ZARY@(ZI))="" D Q ; AT THE END . . D C0CEND("ZWRK",ZI) ; INCLUDE LAST LINE IN WORK ARRAY . I ZI=1 D C0CBEGIN("ZWRK",ZI) ; START WITH FIRST LINE . I @ZARY@(ZI)["" D C0CBEGIN("ZWRK",ZI+1) ;NEXT LINE IS A BEGIN S ZI="" F S ZI=$O(ZWRK(ZI)) Q:ZI="" D ; MAKE A BUILD LIST FROM THE WORK ARRAY . D QUEUE^C0CXPATH("ZBLD",ZARY,$P(ZWRK(ZI),"^",1),$P(ZWRK(ZI),"^",2)) D BUILD^C0CXPATH("ZBLD",OUTARY) ; BUILD NEW ARRAY WITHOUT TEXT SECTIONS K @OUTARY@(0) ; GET RID OF THE LINE COUNT Q ; C0CBEGIN(ZA,LN) ; INSERTS A BEGIN LINE LN INTO ARRAY ZWRK, PASSED BY NAME N ZI S ZI=$O(@ZA@(""),-1) I ZI="" S ZI=1 E S ZI=ZI+1 ; INCREMENT COUNT IN WORK ARRAY S $P(@ZA@(ZI),"^",1)=LN Q ; C0CEND(ZB,LN) ; INSERTS AN END LINE LN INTO ARRAY ZWRK, PASSED BY NAME N ZI S ZI=$O(@ZB@(""),-1) I ZI="" S ZI=1 S $P(@ZB@(ZI),"^",2)=LN Q ; SEPARATE(OUTARY,INARY) ; SEPARATES XPATH VARIABLES ACCORDING TO THEIR ; ROOT ; /Problems/etc/etc goes to @OUTARY@("Problems","/Problems/etc/etc") S ZI="" F S ZI=$O(@INARY@(ZI)) Q:ZI="" D ; FOR EACH ELEMENT OF THE ARRAY . I $P(ZI,"//",2)'="" D ; FOR NON-BODY ENTRIES . . S ZJ=$P(ZI,"/",4) ; things like From Patient Actor . E D ; FOR BODY PARTS . . S ZJ=$P(ZI,"/",2) ; . . I ZJ="" S ZJ=$P(ZI,"/",3) ; . S @OUTARY@(ZJ,ZI)=$G(@INARY@(ZI)) ;FIX THIS FOR MULTILINE COMMENTS Q ; FINDTID ; FIND TEMPLATE IDS IN DOM 1 S C0CDOCID=1 S ZD=$NA(^TMP("MXMLDOM",$J,C0CDOCID)) S ZN="" S CURSEC="" S TID="" F S ZN=$O(@ZD@(ZN)) Q:ZN="" D ; . I $$TAG(ZN)="root" D ; . . I $$TAG($$PARENT(ZN))="templateId" D ; ONLY LOOKING FOR TEMPLATES . . . S ZG=$$PARENT($$PARENT(ZN)) . . . S ZG2=$$PARENT(ZG) ;COMPONENT THAT HOLDS THIS SECTION . . . S CMT=$G(@ZD@(ZG,"X",1)) . . . I CMT="" S CMT="?" . . . I $$TAG(ZG)="section" D ;START OF A SECTION . . . . S CURSEC=$$PARENT(ZG) . . . . S SECCMT=$G(@ZD@(CURSEC,"X",1)) . . . . I SECCMT="" S SECCMT="?" . . . . S SECTID=$G(@ZD@(ZN,"T",1)) ;SECTION TEMPLATE ID . . . S TID=$G(@ZD@(ZN,"T",1)) ;TEMPLATE ID . . . I CURSEC'="" D ; IF WE ARE IN A SECTION . . . . S CCDDIR(ZG2,CURSEC,$$TAG(ZG2),CMT,SECCMT)=TID . . . . S DOMMAP(ZG2)=CURSEC_U_$$TAG(ZG2)_U_TID_U_SECTID . . . W !,$$TAG(ZG2)," ",$G(@ZD@(ZG,"X",1)) . . . W " root ",ZN," ",@ZD@(ZN,"T",1) Q ; FINDALT ; PROCESS THE DOMMAP AND FIND THE ALT TAGS FOR COMPONENTS ; S ZI="" F S ZI=$O(DOMMAP(ZI)) Q:ZI="" D ; FOR EACH NODE IN THE MAP . S ZJ=DOMMAP(ZI) ; . S PARNODE=$P(ZJ,U,1) ;PARENT NODE . S TAG=$P(ZJ,U,2) ;THIS TAG . S TID=$P(ZJ,U,3) ;THIS TEMPLATE ID . S PARTID=$P(ZJ,U,4) ;PARENT TEMPLATE ID . S ZIEN=$O(^C0CXDS(178.101,"TID",TID,"")) ;THIS NODE IEN . S PARIEN=$O(^C0CXDS(178.101,"TID",PARTID,"")) ;PARENT NODE IEN . I ZI=PARNODE D ; IF THIS IS A SECTION NODE . . S ALTTAG=$$GET1^DIQ(178.101,PARIEN_",",.03) ;ALT TAG FIELD FOR PARENT . . S NAME=$$GET1^DIQ(178.101,ZIEN_",",.01) ;NAME OF THIS NODE'S TEMPLATE . . W ZI," ",TAG," ",ALTTAG," ",NAME,! . . S C0CTAGS(ZI)=ALTTAG . E D ; NOT A SECTION NODE . . N ZJ S ZJ="" . . S ZJ=$O(^C0CXDS(178.101,"D",PARIEN,ZIEN,"")) ;A WHEREUSED POINTER? . . I ZJ'="" D ; THERE IS A NEW LABEL FOR THIS NODE . . . N ZK . . . S ZK=$$GET1^DIQ(178.111,ZJ_","_ZIEN_",",2) . . . I ZK'="" D ; . . . . W "FOUND ",ZK,! . . . . S C0CTAGS(ZI)=ZK ; NEW TAG FOR INTERSECTION Q ; ALTTAG(NODE) ; SET Y EQUAL TO THE ALT TAG FOUND IN C0CTAGS IF NODE IF FOUND ; S Y=$G(C0CTAGS(NODE)) Q ; SETCBK ; SET THE TAG CALLBACK FOR XPATH PROCESSSING OF THE CCD S C0CCBK("TAG")="D ALTTAG^C0CMCCD(ZOID)" Q ; OUTCCD(GARYIN) ; OUTPUT THE PARSED CCD TO A TEXT FILE ;D TEST3^C0CMXML N ZT S ZT=$NA(^TMP("CCDOUT",$J)) N ZI,ZJ S ZI=1 S ZJ="" K @ZT F S ZJ=$O(GARYIN(ZJ)) Q:ZJ="" D ; . S @ZT@(ZI)=ZJ_"^"_GARYIN(ZJ) . S ZI=ZI+1 S ONAME=$NA(@ZT@(1)) W $$OUTPUT^C0CXPATH(ONAME,"CCDOUT.txt","/home/vademo2/CCR") K @ZT Q ; GENXDS(ZD) ; GENERATE THE XDS PROTOTYPE RECORDS FROM A CCDDIR ARRAY ; ARRAY ELEMENTS LOOK LIKE: ; CCDDIR(1659,1634,"observation"," Result observaion template "," Vital signs section template ")="2.16.840.1.113883.10.20.1.31" ;or CCDDIR(cur node,section node,cur tag,cur name,sec name)=templateId S ZF=178.101 ; FILE NUMBER FOR THE C0C XDS PROTOTYPE FILE S ZI=$Q(@ZD@("")) ;FIRST ARRAY ELEMENT S DONE=0 F Q:DONE D ; . W @ZI,! . S ZJ=$QS(ZI,5) . S ZJ=$E(ZJ,2,$L(ZJ)) ;STRIP THE LEADING SPACE . S C0CFDA(ZF,"?+1,",.01)=ZJ . S C0CFDA(ZF,"?+1,",.02)=$QS(ZI,4) ; TAG FOR THIS TEMPLATE . S C0CFDA(ZF,"?+1,",1)=@ZI . D UPDIE . S ZI=$Q(@ZI) . I ZI="" S DONE=1 Q ; WHRUSD(ZD) ; UPDATE THE C0C XDS FILE WITH WHERE USED DATA FROM ; CCDDIR PASS BY NAME ; ARRAY ELEMENTS LOOK LIKE: ; CCDDIR(1634," Vital signs section template ",1659,"observation"," Result observaion template ")="2.16.840.1.113883.10.20.1.31" ;or CCDDIR(section node,sec name, cur node,cur tag,cur name)=templateId S ZF=178.101 ; FILE NUMBER FOR THE C0C XDS PROTOTYPE FILE S ZSF=178.111 ; WHERE USED SUBFILE OF C0C XDS PROTOTYPE FILE S ZI=$Q(@ZD@("")) ;FIRST ARRAY ELEMENT S DONE=0 F Q:DONE D ; . W @ZI . S ZIEN=$O(^C0CXDS(178.101,"TID",@ZI,"")) ; IEN FOR THIS NODE'S TEMPLATE . W " IEN:",ZIEN . S ZJ=$QS(ZI,2) . S ZJ=$E(ZJ,2,$L(ZJ)) ;STRIP THE LEADING SPACE . S ZPIEN=$O(^C0CXDS(178.101,"B",ZJ,"")) ; PARENT IEN . W " PARENT IEN:",ZPIEN . S ZTAG=$QS(ZI,4) ; TAG FOR THIS TEMPLATE . W " TAG:",ZTAG,! . I ZIEN'=ZPIEN D ; ONLY FOR CHILD TEMPLATES . . S C0CFDA(ZSF,"?+1,"_ZIEN_",",.01)=ZPIEN ; NEW SUBFILE ENTRY WITH PAR PTR . . S C0CFDA(ZSF,"?+1,"_ZIEN_",",1)=ZTAG ; TAG FOR NEW ENTRY . . D UPDIE . ;S C0CFDA(ZF,"?+1,",1)=@ZI . ;D UPDIE . S ZI=$Q(@ZI) . I ZI="" S DONE=1 Q ; UPDIE ; INTERNAL ROUTINE TO CALL UPDATE^DIE AND CHECK FOR ERRORS K ZERR D CLEAN^DILF D UPDATE^DIE("","C0CFDA","","ZERR") I $D(ZERR) S $EC=",U1," K C0CFDA Q ;