| 1 | C0CNHIN ; GPL - PROCESSING FOR OUTPUT OF NHINV ROUTINES;6/3/11 17:05
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| 2 | ;;1.2;CCD/CCR GENERATION UTILITIES;;Oct 30, 2012;Build 50
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| 3 | ;Copyright 2011 George Lilly.
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| 4 | ;
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| 5 | ; This program is free software: you can redistribute it and/or modify
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| 6 | ; it under the terms of the GNU Affero General Public License as
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| 7 | ; published by the Free Software Foundation, either version 3 of the
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| 8 | ; License, or (at your option) any later version.
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| 9 | ;
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| 10 | ; This program is distributed in the hope that it will be useful,
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| 11 | ; but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 12 | ; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 13 | ; GNU Affero General Public License for more details.
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| 14 | ;
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| 15 | ; You should have received a copy of the GNU Affero General Public License
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| 16 | ; along with this program. If not, see <http://www.gnu.org/licenses/>.
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| 17 | ;
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| 18 | Q
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| 19 | EN(ZRTN,ZDFN,ZPART,KEEP) ; GENERATE AN NHIN ARRAY FOR A PATIENT
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| 20 | ;
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| 21 | K GARY,GNARY,GIDX,C0CDOCID
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| 22 | N GN
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| 23 | K ^TMP("NHINV",$J) ; CLEAN UP FROM LAST CALL
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| 24 | K ^TMP("MXMLDOM",$J) ; CLEAN UP DOM
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| 25 | K ^TMP("MXMLERR",$J) ; CLEAN UP MXML ERRORS
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| 26 | D GET^NHINV(.GN,ZDFN,ZPART) ; CALL NHINV ROUTINES TO PULL XML
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| 27 | S GN=$P(GN,")",1)_")" ; CUT OFF THE REST OF LINE PROTOCOL
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| 28 | S C0CDOCID=$$PARSE(GN,"NHINARRAY") ; PARSE WITH MXML
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| 29 | D DOMO^C0CDOM(C0CDOCID,"/","ZRTN","GIDX","GARY",,"/results/") ; BLD ARRAYS
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| 30 | I '$G(KEEP) K GIDX,GARY ; GET RID OF THE ARRAYS UNLESS KEEP=1
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| 31 | ;D PROCESS("ZRTN",GN,"/result/",$G(KEEP))
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| 32 | Q
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| 33 | ;
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| 34 | PQRI(ZOUT,KEEP) ; RETURN THE NHIN ARRAY FOR THE PQRI XML TEMPLATE
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| 35 | ;
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| 36 | N ZG
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| 37 | S ZG=$NA(^TMP("PQRIXML",$J))
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| 38 | K @ZG
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| 39 | D GETXML^C0CMXP(ZG,"PQRIXML") ; GET THE XML FROM C0C MISC XML
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| 40 | N C0CDOCID
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| 41 | S C0CDOCID=$$PARSE^C0CDOM(ZG,"PQRIXML") ; PARSE THE XML
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| 42 | D DOMO^C0CDOM(C0CDOCID,"/","ZOUT","GIDX","GARY",,"//submission") ; BLD ARRAYS
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| 43 | I '$G(KEEP) K GIDX,GARY ; GET RID OF THE ARRAYS UNLESS KEEP=1
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| 44 | Q
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| 45 | ;
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| 46 | PQRI2(ZRTN) ; RETURN THE NHIN ARRAY FOR PQRI ONE MEASURE
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| 47 | ;
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| 48 | ;N GG
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| 49 | D GETXML^C0CMXP("GG","PQRI ONE MEASURE")
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| 50 | D PROCESS(ZRTN,"GG","root",1)
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| 51 | Q
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| 52 | ;
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| 53 | PROCESS(ZRSLT,ZXML,ZREDUCE,KEEP) ; PARSE AND RUN DOMO ON XML
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| 54 | ; ZRTN IS PASSED BY REFERENCE
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| 55 | ; ZXML IS PASSED BY NAME
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| 56 | ; IF KEEP IS 1, GARY AND GIDX ARE NOT KILLED
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| 57 | ;
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| 58 | N GN
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| 59 | S GN=$NA(^TMP("C0CPROCESS",$J))
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| 60 | K @GN
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| 61 | M @GN=@ZXML
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| 62 | S C0CDOCID=$$PARSE(GN,"NHINARRAY") ; PARSE WITH MXML
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| 63 | K @GN
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| 64 | D DOMO^C0CDOM(C0CDOCID,"/","ZRSLT","GIDX","GARY",,$G(ZREDUCE)) ; BLD ARRAYS
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| 65 | I '$G(KEEP) K GIDX,GARY ; GET RID OF THE ARRAYS UNLESS KEEP=1
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| 66 | Q
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| 67 | ;
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| 68 | LOADSMRT ;
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| 69 | ;
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| 70 | K ^GPL("SMART")
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| 71 | S GN=$NA(^GPL("SMART",1))
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| 72 | I $$FTG^%ZISH("/home/george/","alex-lewis2.xml",GN,2) W !,"SMART FILE LOADED"
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| 73 | Q
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| 74 | ;
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| 75 | SMART ; TRY IT WITH SMART
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| 76 | ;
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| 77 | S GN=$NA(^GPL("SMART"))
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| 78 | ;K ^TMP("MXMLDOM",$J)
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| 79 | K ^TMP("MXMLERR",$J)
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| 80 | S C0CDOCID=$$PARSE(GN,"SMART")
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| 81 | D DOMO^C0CDOM(C0CDOCID,"/","GNARY","GIDX","GARY",,"//rdf:RDF/")
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| 82 | ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
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| 83 | Q
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| 84 | ;
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| 85 | CCR ; TRY IT WITH A CCR
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| 86 | ;
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| 87 | S GN=$NA(^GPL("CCR"))
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| 88 | ;K ^TMP("MXMLDOM",$J)
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| 89 | K ^TMP("MXMLERR",$J)
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| 90 | S C0CDOCID=$$PARSE(GN,"CCR")
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| 91 | D DOMO^C0CDOM(C0CDOCID,"/","GNARY","GIDX","GARY",,"//ContinuityOfCareRecord/Body/")
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| 92 | ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
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| 93 | Q
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| 94 | ;
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| 95 | MED ; TRY IT WITH A CCR MED SECTION
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| 96 | ;
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| 97 | S GN=$NA(^GPL("MED"))
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| 98 | K ^TMP("MXMLDOM",$J)
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| 99 | K ^TMP("MXMLERR",$J)
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| 100 | S C0CDOCID=$$PARSE(GN,"MED")
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| 101 | D DOMO^C0CDOM(C0CDOCID,"/","GNARY","GIDX","GARY",,"//Medications/")
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| 102 | ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
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| 103 | Q
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| 104 | ;
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| 105 | CCD ; TRY IT WITH A CCD
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| 106 | ;
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| 107 | S GN=$NA(^GPL("CCD"))
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| 108 | ;K ^TMP("MXMLDOM",$J)
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| 109 | K ^TMP("MXMLERR",$J)
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| 110 | S C0CDOCID=$$PARSE(GN,"CCD")
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| 111 | D DOMO^C0CDOM(C0CDOCID,"/","GNARY","GIDX","GARY",,"//ClinicalDocument/component/structuredBody/")
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| 112 | ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
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| 113 | Q
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| 114 | ;
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| 115 | TEST1 ; TEST NHINV OUTPUT IN ^GPL("NIHIN")
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| 116 | ; PARSED WITH MXML
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| 117 | ; RUN THROUGH XPATH
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| 118 | K GARY,GIDX,C0CDOCID
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| 119 | S GN=$NA(^GPL("NHIN"))
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| 120 | ;S GN=$NA(^GPL("DOMI"))
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| 121 | S C0CDOCID=$$PARSE(GN,"GPLTEST")
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| 122 | D DOMO^C0CDOM(C0CDOCID,"/","GNARY","GIDX","GARY",,"/results/")
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| 123 | K ^GPL("GNARY")
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| 124 | M ^GPL("GNARY")=GNARY
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| 125 | Q
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| 126 | ;
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| 127 | TEST2 ; PUT GNARY THROUGH DOMI AND STORE XML IN ^GPL("DOMI")
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| 128 | ;
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| 129 | S GN=$NA(^GPL("GNARY"))
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| 130 | S C0CDOCID=$$DOMI^C0CDOM(GN,,"results")
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| 131 | D OUTXML^C0CDOM("G",C0CDOCID)
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| 132 | K ^GPL("DOMI")
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| 133 | M ^GPL("DOMI")=G
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| 134 | Q
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| 135 | ;
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| 136 | TEST3 ; TEST NHINV OUTPUT IN ^GPL("NIHIN")
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| 137 | ; PARSED WITH MXML
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| 138 | ; RUN THROUGH XPATH
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| 139 | K GARY,GIDX,C0CDOCID
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| 140 | ;S GN=$NA(^GPL("NHIN"))
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| 141 | S GN=$NA(^GPL("DOMI"))
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| 142 | S C0CDOCID=$$PARSE(GN,"GPLTEST")
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| 143 | D DOMO^C0CDOM(C0CDOCID,"/","GNARY","GIDX","GARY",,"/results/")
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| 144 | Q
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| 145 | ;
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| 146 | DOMO(ZOID,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; RECURSIVE ROUTINE TO POPULATE
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| 147 | ; THE XPATH INDEX ZXIDX, PASSED BY NAME
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| 148 | ; THE XPATH ARRAY XPARY, PASSED BY NAME
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| 149 | ; ZOID IS THE STARTING OID
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| 150 | ; ZPATH IS THE STARTING XPATH, USUALLY "/"
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| 151 | ; ZNUM IS THE MULTIPLE NUMBER [x], USUALLY NULL WHEN ON THE TOP NODE
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| 152 | ; ZREDUX IS THE XPATH REDUCTION STRING, TAKEN OUT OF EACH XPATH IF PRESENT
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| 153 | I $G(ZREDUX)="" S ZREDUX=""
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| 154 | N NEWPATH,NARY ; NEWPATH IS AN XPATH NARY IS AN NHIN MUMPS ARRAY
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| 155 | N NEWNUM S NEWNUM=""
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| 156 | I $G(ZNUM)>0 S NEWNUM="["_ZNUM_"]"
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| 157 | S NEWPATH=ZPATH_"/"_$$TAG(ZOID)_NEWNUM ; CREATE THE XPATH FOR THIS NODE
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| 158 | I $G(ZREDUX)'="" D ; REDUX PROVIDED?
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| 159 | . N GT S GT=$P(NEWPATH,ZREDUX,2)
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| 160 | . I GT'="" S NEWPATH=GT
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| 161 | S @ZXIDX@(NEWPATH)=ZOID ; ADD THE XPATH FOR THIS NODE TO THE XPATH INDEX
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| 162 | N GA D ATT("GA",ZOID) ; GET ATTRIBUTES FOR THIS NODE
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| 163 | I $D(GA) D ; PROCESS THE ATTRIBUTES
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| 164 | . N ZI S ZI=""
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| 165 | . F S ZI=$O(GA(ZI)) Q:ZI="" D ; FOR EACH ATTRIBUTE
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| 166 | . . N ZP S ZP=NEWPATH_"/"_ZI ; PATH FOR ATTRIBUTE
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| 167 | . . S @ZXPARY@(ZP)=GA(ZI) ; ADD THE ATTRIBUTE XPATH TO THE XP ARRAY
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| 168 | . . I GA(ZI)'="" D ADDNARY(ZP,GA(ZI)) ; ADD THE NHIN ARRAY VALUE
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| 169 | N GD D DATA("GD",ZOID) ; SEE IF THERE IS DATA FOR THIS NODE
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| 170 | I $D(GD(2)) D ;
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| 171 | . M @ZXPARY@(NEWPATH)=GD ; IF MULITPLE DATA MERGE TO THE ARRAY
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| 172 | E I $D(GD(1)) D ;
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| 173 | . S @ZXPARY@(NEWPATH)=GD(1) ; IF SINGLE VALUE, ADD TO ARRAY
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| 174 | . I GD(1)'="" D ADDNARY(NEWPATH,GD(1)) ; ADD TO NHIN ARRAY
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| 175 | N ZFRST S ZFRST=$$FIRST(ZOID) ; SET FIRST CHILD
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| 176 | I ZFRST'=0 D ; THERE IS A CHILD
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| 177 | . N ZNUM
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| 178 | . N ZMULT S ZMULT=$$ISMULT(ZFRST) ; IS FIRST CHILD A MULTIPLE
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| 179 | . D DOMO(ZFRST,NEWPATH,ZNARY,ZXIDX,ZXPARY,$S(ZMULT:1,1:""),ZREDUX) ; THE CHILD
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| 180 | N GNXT S GNXT=$$NXTSIB(ZOID)
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| 181 | I $$TAG(GNXT)'=$$TAG(ZOID) S ZNUM="" ; RESET COUNTING AFTER MULTIPLES
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| 182 | I GNXT'=0 D ;
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| 183 | . N ZMULT S ZMULT=$$ISMULT(GNXT) ; IS THE SIBLING A MULTIPLE?
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| 184 | . I (ZNUM="")&(ZMULT) D ; SIBLING IS FIRST OF MULTIPLES
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| 185 | . . N ZNUM S ZNUM=1 ;
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| 186 | . . D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; DO NEXT SIB
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| 187 | . E D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,$S(ZNUM>0:ZNUM+1,1:""),ZREDUX) ; SIB
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| 188 | Q
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| 189 | ;
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| 190 | ADDNARY(ZXP,ZVALUE) ; ADD AN NHIN ARRAY VALUE TO ZNARY
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| 191 | ;
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| 192 | N ZZI,ZZJ,ZZN
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| 193 | S ZZI=$P(ZXP,"/",1) ; FIRST PIECE OF XPATH ARRAY
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| 194 | I ZZI="" Q ; DON'T ADD THIS ONE .. PROBABLY THE //results NODE
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| 195 | S ZZJ=$P(ZXP,ZZI_"/",2) ; REST OF XPATH ARRAY
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| 196 | S ZZJ=$TR(ZZJ,"/",".") ; REPLACE / WITH .
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| 197 | I ZZI'["]" D ; A SINGLETON
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| 198 | . S ZZN=1
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| 199 | E D ; THERE IS AN [x] OCCURANCE
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| 200 | . S ZZN=$P($P(ZZI,"[",2),"]",1) ; PULL OUT THE OCCURANCE
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| 201 | . S ZZI=$P(ZZI,"[",1) ; TAKE OUT THE [X]
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| 202 | I ZZJ'="" S @ZNARY@(ZZI,ZZN,ZZJ)=ZVALUE
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| 203 | Q
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| 204 | ;
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| 205 | PARSE(INXML,INDOC) ;CALL THE MXML PARSER ON INXML, PASSED BY NAME
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| 206 | ; INDOC IS PASSED AS THE DOCUMENT NAME - DON'T KNOW WHERE TO STORE THIS NOW
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| 207 | ; EXTRINSIC WHICH RETURNS THE DOCID ASSIGNED BY MXML
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| 208 | ;Q $$EN^MXMLDOM(INXML)
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| 209 | Q $$EN^MXMLDOM(INXML,"W")
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| 210 | ;
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| 211 | ISMULT(ZOID) ; RETURN TRUE IF ZOID IS ONE OF A MULTIPLE
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| 212 | N ZN
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| 213 | ;I $$TAG(ZOID)["entry" B
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| 214 | S ZN=$$NXTSIB(ZOID)
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| 215 | I ZN'="" Q $$TAG(ZOID)=$$TAG(ZN) ; IF TAG IS THE SAME AS NEXT SIB TAG
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| 216 | Q 0
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| 217 | ;
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| 218 | FIRST(ZOID) ;RETURNS THE OID OF THE FIRST CHILD OF ZOID
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| 219 | Q $$CHILD^MXMLDOM(C0CDOCID,ZOID)
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| 220 | ;
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| 221 | PARENT(ZOID) ;RETURNS THE OID OF THE PARENT OF ZOID
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| 222 | Q $$PARENT^MXMLDOM(C0CDOCID,ZOID)
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| 223 | ;
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| 224 | ATT(RTN,NODE) ;GET ATTRIBUTES FOR ZOID
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| 225 | S HANDLE=C0CDOCID
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| 226 | K @RTN
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| 227 | D GETTXT^MXMLDOM("A")
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| 228 | Q
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| 229 | ;
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| 230 | TAG(ZOID) ; RETURNS THE XML TAG FOR THE NODE
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| 231 | ;I ZOID=149 B ;GPLTEST
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| 232 | N X,Y
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| 233 | S Y=""
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| 234 | S X=$G(C0CCBK("TAG")) ;IS THERE A CALLBACK FOR THIS ROUTINE
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| 235 | I X'="" X X ; EXECUTE THE CALLBACK, SHOULD SET Y
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| 236 | I Y="" S Y=$$NAME^MXMLDOM(C0CDOCID,ZOID)
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| 237 | Q Y
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| 238 | ;
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| 239 | NXTSIB(ZOID) ; RETURNS THE NEXT SIBLING
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| 240 | Q $$SIBLING^MXMLDOM(C0CDOCID,ZOID)
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| 241 | ;
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| 242 | DATA(ZT,ZOID) ; RETURNS DATA FOR THE NODE
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| 243 | ;N ZT,ZN S ZT=""
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| 244 | ;S C0CDOM=$NA(^TMP("MXMLDOM",$J,C0CDOCID))
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| 245 | ;Q $G(@C0CDOM@(ZOID,"T",1))
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| 246 | S ZN=$$TEXT^MXMLDOM(C0CDOCID,ZOID,ZT)
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| 247 | Q
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| 248 | ;
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| 249 | OUTXML(ZRTN,INID) ; USES C0CMXMLB (MXMLBLD) TO OUTPUT XML FROM AN MXMLDOM
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| 250 | ;
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| 251 | S C0CDOCID=INID
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| 252 | D START^C0CMXMLB($$TAG(1),,"G")
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| 253 | D NDOUT($$FIRST(1))
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| 254 | D END^C0CMXMLB ;END THE DOCUMENT
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| 255 | M @ZRTN=^TMP("MXMLBLD",$J)
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| 256 | K ^TMP("MXMLBLD",$J)
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| 257 | Q
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| 258 | ;
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| 259 | NDOUT(ZOID) ;CALLBACK ROUTINE - IT IS RECURSIVE
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| 260 | N ZI S ZI=$$FIRST(ZOID)
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| 261 | I ZI'=0 D ; THERE IS A CHILD
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| 262 | . N ZATT D ATT("ZATT",ZOID) ; THESE ARE THE ATTRIBUTES MOVED TO ZATT
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| 263 | . D MULTI^C0CMXMLB("",$$TAG(ZOID),.ZATT,"NDOUT^C0CMXML(ZI)") ;HAVE CHILDREN
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| 264 | E D ; NO CHILD - IF NO CHILDREN, A NODE HAS DATA, IS AN ENDPOINT
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| 265 | . ;W "DOING",ZOID,!
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| 266 | . N ZD D DATA("ZD",ZOID) ;NODES WITHOUT CHILDREN HAVE DATA
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| 267 | . N ZATT D ATT("ZATT",ZOID) ;ATTRIBUTES
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| 268 | . D ITEM^C0CMXMLB("",$$TAG(ZOID),.ZATT,$G(ZD(1))) ;NO CHILDREN
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| 269 | I $$NXTSIB(ZOID)'=0 D ; THERE IS A SIBLING
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| 270 | . D NDOUT($$NXTSIB(ZOID)) ;RECURSE FOR SIBLINGS
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| 271 | Q
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| 272 | ;
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| 273 | WNHIN(ZDFN) ; WRITES THE XML OUTPUT OF GET^NHINV TO AN XML FILE
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| 274 | ;
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| 275 | N GN,GN2
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| 276 | D GET^NHINV(.GN,ZDFN) ; EXTRACT THE XML
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| 277 | S GN2=$NA(@GN@(1))
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| 278 | W $$OUTPUT^C0CXPATH(GN2,"nhin_"_ZDFN_".xml","/home/wvehr3-09/")
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| 279 | Q
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| 280 | ;
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| 281 | TESTNARY ; TEST MAKING A NHIN ARRAY
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| 282 | N ZI S ZI=""
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| 283 | N ZH ; DOM HANDLE
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| 284 | D TEST1 ; PARSE AN NHIN RESULT INTO THE DOM
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| 285 | S ZH=C0CDOCID ; SET THE HANDLE
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| 286 | N ZD S ZD=$NA(^TMP("MXMLDOM",$J,ZH))
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| 287 | F S ZI=$O(@ZD@(ZI)) Q:ZI="" D ; FOR EACH NODE
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| 288 | . N ZATT
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| 289 | . D MNARY(.ZATT,ZH,ZI)
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| 290 | . N ZPRE,ZN
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| 291 | . S ZPRE=$$PRE(ZI)
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| 292 | . S ZN=$P(ZPRE,",",2)
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| 293 | . S ZPRE=$P(ZPRE,",",1)
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| 294 | . ;I $D(ZATT) ZWR ZATT
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| 295 | . N ZJ S ZJ=""
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| 296 | . F S ZJ=$O(ZATT(ZJ)) Q:ZJ="" D ; FOR EACH ATTRIBUTE
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| 297 | . . W ZPRE_"["_ZN_"]"_$$TAG(ZI)_"."_ZJ_"="_ZATT(ZJ),!
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| 298 | . . S GOUT(ZPRE,ZN,$$TAG(ZI)_"."_ZJ)=ZATT(ZJ)
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| 299 | Q
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| 300 | ;
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| 301 | PRE(ZNODE) ; EXTRINSIC WHICH RETURNS THE PREFIX FOR A NODE
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| 302 | ;
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| 303 | N GI,GI2,GPT,GJ,GN
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| 304 | S GI=$$PARENT(ZNODE) ; PARENT NODE
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| 305 | I GI=0 Q "" ; NO PARENT
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| 306 | S GPT=$$TAG(GI) ; TAG OF PARENT
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| 307 | S GI2=$$PARENT(GI) ; PARENT OF PARENT
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| 308 | I (GI2'=0)&($$TAG(GI2)'="results") S GPT=$$TAG(GI2)_"."_GPT
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| 309 | S GJ=$$FIRST(GI) ; NODE OF FIRST SIB
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| 310 | I GJ=ZNODE Q:$$TAG(GI)_",1"
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| 311 | F GN=2:1 Q:GJ=ZNODE D ;
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| 312 | . S GJ=$$NXTSIB(GJ) ; NEXT SIBLING
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| 313 | Q GPT_","_GN
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| 314 | ;
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| 315 | MNARY(ZRTN,ZHANDLE,ZOID) ; MAKE A NHIN ARRAY FROM A DOM NODE
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| 316 | ; RETURNED IN ZRTN, PASSED BY REFERENCE
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| 317 | ; ZHANDLE IS THE DOM DOCUMENT ID
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| 318 | ; ZOID IS THE DOM NODE
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| 319 | D ATT("ZRTN",ZOID)
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| 320 | Q
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| 321 | ;
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