source: ccr/trunk/p/C0CRIMA.m@ 430

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1C0CRIMA ; CCDCCR/GPL - RIM REPORT ROUTINES; 6/6/08
2 ;;0.1;CCDCCR;nopatch;noreleasedate
3 ;Copyright 2008,2009 George Lilly, University of Minnesota.
4 ;Licensed under the terms of the GNU General Public License.
5 ;See attached copy of the License.
6 ;
7 ;This program is free software; you can redistribute it and/or modify
8 ;it under the terms of the GNU General Public License as published by
9 ;the Free Software Foundation; either version 2 of the License, or
10 ;(at your option) any later version.
11 ;
12 ;This program is distributed in the hope that it will be useful,
13 ;but WITHOUT ANY WARRANTY; without even the implied warranty of
14 ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
15 ;GNU General Public License for more details.
16 ;
17 ;You should have received a copy of the GNU General Public License along
18 ;with this program; if not, write to the Free Software Foundation, Inc.,
19 ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
20 ;
21 ; THESE ROUTINES EXAMINE ONE OR MORE, UP TO ALL, OF THE PATIENTS ON THE
22 ; SYSTEM TO DETERMINE HOW COMPLETE THE RESULTING CCR OR CCD WOULD BE FOR
23 ; THESE PATIENTS. IT BEGINS TO MEASURE "HL7 RIM COHERENCE" WHICH IS HOW USEFUL
24 ; THE VARIABLES WILL BE TO A RIM-MODELED APPLICATION AFTER THEY ARE
25 ; CONVEYED VIA THE CCR OR CCD.
26 ; FACTORS THAT AFFECT RIM COHERENCE INCLUDE:
27 ; 1. THE PRESENSE OF CLINICAL DATA IN A SECTION
28 ; 2. ARE THE DATA ELEMENTS TIME-BOUND
29 ; 3. ARE THE DATA ELEMENTS CODED WITH SNOMED OR LOINC ETC
30 ; 4. ARE SOURCE ACTORS ASSOCIATED WITH THE DATA ELEMENTS
31 ; 5. ARE ACTORS IDENTIFIED REGARDING THEIR ROLE
32 ; .. AND OTHER FACTORS YET TO BE DETERMINED
33 ;
34 ; SINCE THESE MEASUREMENTS ARE DONE AT THE VARIABLE LEVEL, THEY
35 ; REFLECT ON RIM COHERENCE WHETHER THE CCR OR THE CCD IS USED FOR
36 ; CONVEYANCE TO THE RIM APPLICATION.
37 ;
38 ;
39ANALYZE(BEGDFN,DFNCNT,APARMS) ; RIM COHERANCE ANALYSIS ROUTINE
40 ; BEGINS AT BEGDFN AND GOES FOR DFNCNT PATIENTS
41 ; TO RESUME AT NEXT PATIENT, USE BEGDFN=""
42 ; USE RESET^C0CRIMA TO RESET TO TOP OF PATIENT LIST
43 ; APARMS ARE PARAMETERS TO BE USED IN THE EXTRACTION
44 ; SEE C0CPARMS FOR SUPPORTED PARAMTERS
45 ;
46 N RIMARY,RIMTMP,RIMI,RIMDFN,RATTR
47 N CCRGLO
48 D ASETUP ; SET UP VARIABLES AND GLOBALS
49 D AINIT ; INITIALIZE ATTRIBUTE VALUE TABLE
50 I '$D(@RIMBASE@("RESUME")) S @RIMBASE@("RESUME")=$O(^DPT(0)) ; FIRST TIME
51 S RESUME=@RIMBASE@("RESUME") ; WHERE WE LEFT OFF LAST RUN
52 S RIMDFN=BEGDFN ; BEGIN WITH THE BEGDFN PATIENT
53 I RIMDFN="" S RIMDFN=RESUME
54 I +RIMDFN=0 D Q ; AT THE END OF THE PATIENTS
55 . W "END OF PATIENT LIST, CALL RESET^C0CRIMA",!
56 I '$D(APARMS) S APARMS="" ; DEFAULT NO OVERRIDE PARMS
57 F RIMI=1:1:DFNCNT D Q:+RIMDFN=0 ; FOR DFNCNT NUMBER OF PATIENTS OR END
58 . K @RIMBASE@("VARS",RIMDFN) ; CLEAR OUT OLD VARS
59 . D CCRRPC^C0CCCR(.CCRGLO,RIMDFN,APARMS,"CCR") ;PROCESS THE CCR
60 . W RIMDFN,!
61 . ;
62 . ; COPY ALL THE VARIABLES TO THE RIM MAP AREA INDEXED BY PATIENT
63 . ;
64 . I $D(^TMP("C0CCCR",$J,"PROBVALS",1)) D ; PROBLEM VARS EXISTS
65 . . M @RIMBASE@("VARS",RIMDFN,"PROBLEMS")=^TMP("C0CCCR",$J,"PROBVALS")
66 . . S @RIMBASE@("VARS",RIMDFN,"PROBLEMS",0)=^TMP("C0CCCR",$J,"PROBVALS",0)
67 . I $D(^TMP("C0CCCR",$J,"VITALS",1)) D ; VITALS VARS EXISTS
68 . . M @RIMBASE@("VARS",RIMDFN,"VITALS")=^TMP("C0CCCR",$J,"VITALS")
69 . I $D(^TMP("C0CCCR",$J,"MEDMAP",1)) D ; MEDS VARS EXISTS
70 . . M @RIMBASE@("VARS",RIMDFN,"MEDS")=^TMP("C0CCCR",$J,"MEDMAP")
71 . I $D(^TMP("C0CCCR",$J,"ALERTS",1,"ALERTOBJECTID")) D ; ALERTS EXIST
72 . . W "FOUND ALERT VARS",!
73 . . M @RIMBASE@("VARS",RIMDFN,"ALERTS")=^TMP("C0CCCR",$J,"ALERTS")
74 . I $D(^TMP("C0CCCR",$J,"RESULTS",0)) D ; RESULTS EXIST
75 . . W "FOUND RESULTS VARS",!
76 . . M @RIMBASE@("VARS",RIMDFN,"RESULTS")=^TMP("C0CCCR",$J,"RESULTS")
77 . I $$CHKSUM(RIMDFN) D ; CHECKSUM HAS CHANGED
78 . . W "CHECKSUM IS NEW OR HAS CHANGED",!
79 . . ZWR ^TMP("C0CRIM","CHKSUM",RIMDFN,*)
80 . K ^TMP("C0CCCR",$J) ; KILL WORK AREA FOR CCR BUILDING
81 . ;
82 . ; EVALUATE THE VARIABLES AND CREATE AN ATTRIBUTE MAP
83 . ;
84 . S RATTR=$$SETATTR(RIMDFN) ; SET THE ATTRIBUTE STRING BASED ON THE VARS
85 . S @RIMBASE@("ATTR",RIMDFN)=RATTR ; SAVE THE ATRIBUTES FOR THIS PAT
86 . ;
87 . ; INCREMENT THE COUNT OF PATIENTS WITH THESE ATTRIBUTES IN ATTRTBL
88 . ;
89 . ; I '$D(@RIMBASE@("ATTRTBL",RATTR)) D ; IF FIRST PAT WITH THESE ATTRS
90 . ; . S @RIMBASE@("ATTRTBL",RATTR)=0 ; DEFAULT VALUE TO BE INCREMENTED
91 . ; S @RIMBASE@("ATTRTBL",RATTR)=@RIMBASE@("ATTRTBL",RATTR)+1 ; INCREMENT
92 . ;
93 . N CATNAME,CATTBL
94 . ; S CATBASE=$NA(@RIMBASE@("ANALYSIS"))
95 . S CATNAME=""
96 . D CPUSH(.CATNAME,RIMBASE,"RIMTBL",RIMDFN,RATTR) ; ADD TO CATEGORY
97 . W "CATEGORY NAME: ",CATNAME,!
98 . ;
99 . F S RIMDFN=$O(^DPT(RIMDFN)) Q:'$$PTST^C0CSYS(RIMDFN) ; NEXT PATIENT
100 . ; PTST TESTS TO SEE IF PATIENT WAS MERGED
101 . ; IF CCRTEST=0, PTST WILL CHECK TO SEE IF THIS IS A TEST PATIENT
102 . ; AND WE SKIP IT
103 . S @RIMBASE@("RESUME")=RIMDFN ; WHERE WE ARE LEAVING OFF THIS RUN
104 ; D PARY^C0CXPATH(@RIMBASE@("ATTRTBL"))
105 Q
106 ;
107SETATTR(SDFN) ; SET ATTRIBUTES BASED ON VARS
108 N SBASE,SATTR
109 S SBASE=$NA(@RIMBASE@("VARS",SDFN))
110 D APOST("SATTR","RIMTBL","HEADER")
111 I $D(@SBASE@("PROBLEMS",1)) D ;
112 . D APOST("SATTR","RIMTBL","PROBLEMS")
113 . ; W "POSTING PROBLEMS",!
114 I $D(@SBASE@("VITALS",1)) D APOST("SATTR","RIMTBL","VITALS")
115 I $D(@SBASE@("IMMUNE",1)) D ;IMMUNIZATIONS PRESENT
116 . D APOST("SATTR","RIMTBL","IMMUNE")
117 . N ZR,ZI
118 . D GETPA(.ZR,SDFN,"IMMUNE","IMMUNEPRODUCTCODE")
119 . I ZR(0)>0 D APOST("SATTR","RIMTBL","IMMUNECODE") ;IMMUNIZATION CODES
120 I $D(@SBASE@("MEDS",1)) D ; IF THE PATIENT HAS MEDS VARIABLES
121 . D APOST("SATTR","RIMTBL","MEDS")
122 . N ZR,ZI
123 . D GETPA(.ZR,SDFN,"MEDS","MEDPRODUCTNAMECODEVALUE") ;CHECK FOR MED CODES
124 . I ZR(0)>0 D ; VAR LOOKUP WAS GOOD, CHECK FOR NON=NULL RETURN
125 . . F ZI=1:1:ZR(0) D ; LOOP THROUGH RETURNED VAR^VALUE PAIRS
126 . . . I $P(ZR(ZI),"^",2)'="" D APOST("SATTR","RIMTBL","MEDSCODE") ;CODES
127 . ; D PATD^C0CRIMA(2,"MEDS","MEDPRODUCTNAMECODEVALUE") CHECK FOR MED CODES
128 I $D(@SBASE@("ALERTS",1)) D ; IF THE PATIENT HAS ALERTS
129 . D APOST("SATTR","RIMTBL","ALERTS")
130 . N ZR,ZI
131 . D GETPA(.ZR,SDFN,"ALERTS","ALERTAGENTPRODUCTCODEVALUE") ;REACTANT CODES
132 . I ZR(0)>0 D ; VAR LOOKUP WAS GOOD, CHECK FOR NON=NULL RETURN
133 . . F ZI=1:1:ZR(0) D ; LOOP THROUGH RETURNED VAR^VALUE PAIRS
134 . . . I $P(ZR(ZI),"^",2)'="" D APOST("SATTR","RIMTBL","ALERTSCODE") ;CODES
135 I $D(@SBASE@("RESULTS",1)) D ; IF THE PATIENT HAS LABS VARIABLES
136 . D APOST("SATTR","RIMTBL","RESULTS")
137 . N ZR,ZI
138 . S ZR(0)=0 ; INITIALIZE TO NONE
139 . D RPCGV(.ZR,SDFN,"RESULTS") ;CHECK FOR LABS CODES
140 . ; D PARY^C0CXPATH("ZR") ;
141 . I ZR(0)>0 D ; VAR LOOKUP WAS GOOD, CHECK FOR NON=NULL RETURN
142 . . F ZI=1:1:ZR(0) D ; LOOP THROUGH RETURNED VAR^VALUE PAIRS
143 . . . I $P(ZR(ZI),"^",2)="RESULTTESTCODINGSYSTEM" D ; LOINC CODE CHECK
144 . . . . I $P(ZR(ZI),"^",3)="LOINC" D APOST("SATTR","RIMTBL","RESULTSLN") ;
145 ; D APOST("SATTR","RIMTBL","NOTEXTRACTED") ; OUTPUT NOT YET PRODUCED
146 W "ATTRIBUTES: ",SATTR,!
147 Q SATTR
148 ;
149RESET ; KILL RESUME INDICATOR TO START OVER. ALSO KILL RIM TMP VALUES
150 K ^TMP("C0CRIM","RESUME")
151 K ^TMP("C0CRIM")
152 Q
153 ;
154CLIST ; LIST THE CATEGORIES
155 ;
156 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS
157 N CLBASE,CLNUM,ZI,CLIDX
158 S CLBASE=$NA(@RIMBASE@("RIMTBL","CATS"))
159 S CLNUM=@CLBASE@(0)
160 F ZI=1:1:CLNUM D ; LOOP THROUGH THE CATEGORIES
161 . S CLIDX=@CLBASE@(ZI)
162 . W "(",$P(@CLBASE@(CLIDX),"^",1)
163 . W ":",$P(@CLBASE@(CLIDX),"^",2),") "
164 . W CLIDX,!
165 ; D PARY^C0CXPATH(CLBASE)
166 Q
167 ;
168CPUSH(CATRTN,CBASE,CTBL,CDFN,CATTR) ; ADD PATIENTS TO CATEGORIES
169 ; AND PASS BACK THE NAME OF THE CATEGORY TO WHICH THE PATIENT
170 ; WAS ADDED IN CATRTN, WHICH IS PASSED BY REFERENCE
171 ; CBASE IS WHERE TO PUT THE CATEGORIES PASSED BY NAME
172 ; CTBL IS THE NAME OF THE TABLE USED TO CREATE THE ATTRIBUTES,
173 ; PASSED BY NAME AND USED TO CREATE CATEGORY NAMES IE "@CTBL_X"
174 ; WHERE X IS THE CATEGORY NUMBER. CTBL(0) IS THE NUMBER OF CATEGORIES
175 ; CATBL(X)=CATTR STORES THE ATTRIBUTE IN THE CATEGORY
176 ; CDFN IS THE PATIENT DFN, CATTR IS THE ATTRIBUTE STRING
177 ; THE LIST OF PATIENTS IN A CATEGORY IS STORED INDEXED BY CATEGORY
178 ; NUMBER IE CTBL_X(CDFN)=""
179 ;
180 ; N CCTBL,CENTRY,CNUM,CCOUNT,CPATLIST
181 S CCTBL=$NA(@CBASE@(CTBL,"CATS"))
182 W "CBASE: ",CCTBL,!
183 ;
184 I '$D(@CCTBL@(CATTR)) D ; FIRST PATIENT IN THIS CATEGORY
185 . D PUSH^C0CXPATH(CCTBL,CATTR) ; ADD THE CATEGORY TO THE ARRAY
186 . S CNUM=@CCTBL@(0) ; ARRAY ENTRY NUMBER FOR THIS CATEGORY
187 . S CENTRY=CTBL_"_"_CNUM_U_0 ; TABLE ENTRY DEFAULT
188 . S @CCTBL@(CATTR)=CENTRY ; DEFAULT NON INCREMENTED TABLE ENTRY
189 . ; NOTE THAT P1 IS THE CATEGORY NAME MADE UP OF THE TABLE NAME
190 . ; AND CATGORY ARRAY NUMBER. P2 IS THE COUNT WHICH IS INITIALLY 0
191 ;
192 S CCOUNT=$P(@CCTBL@(CATTR),U,2) ; COUNT OF PATIENTS IN THIS CATEGORY
193 S CCOUNT=CCOUNT+1 ; INCREMENT THE COUNT
194 S $P(@CCTBL@(CATTR),U,2)=CCOUNT ; PUT IT BACK
195 ;
196 S CATRTN=$P(@CCTBL@(CATTR),U,1) ; THE CATEGORY NAME WHICH IS RETURNED
197 ;
198 S CPATLIST=$NA(@CBASE@(CTBL,"PATS",CATRTN)) ; BASE OF PAT LIST FOR THIS CAT
199 W "PATS BASE: ",CPATLIST,!
200 S @CPATLIST@(CDFN)="" ; ADD THIS PATIENT TO THE CAT PAT LIST
201 ;
202 Q
203 ;
204CHKSUM(CKDFN) ; DOES A CHECKSUM AND STORES IT IN MUMPS GLOBALS
205 ;
206 S C0CCKB=$NA(^TMP("C0CRIM","CHKSUM")) ;CHECKSUM BASE
207 S C0CGLB=$NA(^TMP("C0CRIM","VARS")) ;CCR VARIABLE BASE
208 S C0CI=""
209 F S C0CI=$O(@C0CGLB@(CKDFN,C0CI)) Q:C0CI="" D ;FOR EACH DOMAIN
210 . ;W "DFN:",CKDFN," DOMAIN:",C0CI,!
211 . S C0CJ=$NA(@C0CGLB@(CKDFN,C0CI))
212 . I C0CI="HEADER" D ; HAVE TO TAKE OUT THE "DATE GENERATED"
213 . . S C0CDT=@C0CGLB@(CKDFN,C0CI,1,"DATETIME")
214 . . K @C0CGLB@(CKDFN,C0CI,1,"DATETIME")
215 . S C0CCK(C0CI)=$$CHKSUM^XUSESIG1(C0CJ)
216 . I C0CI="HEADER" D ; PUT IT BACK
217 . . S @C0CGLB@(CKDFN,C0CI,1,"DATETIME")=C0CDT
218 S C0CK="C0CCK" ;
219 S C0CALL=$$CHKSUM^XUSESIG1(C0CK) ;CHECKSUM OF ALL DOMAIN CHECKSUMS
220 S CHKR=0 ; RESULT DEFAULT
221 I $D(^TMP("C0CRIM","CHKSUM",CKDFN,"ALL")) D ; OLD CHECKSUM EXISTS
222 . I @C0CCKB@(CKDFN,"ALL")'=C0CALL S CHKR=1
223 E S CHKR=1 ;CHECKSUM IS NEW
224 S @C0CCKB@(CKDFN,"ALL")=C0CALL
225 M @C0CCKB@(CKDFN,"DOMAIN")=C0CCK
226 ZWR ^TMP("C0CRIM","CHKSUM",CKDFN,*)
227 Q CHKR
228 ;
229CCOUNT ; RECOUNT THE CATEGORIES.. USE IN CASE OF RESTART OF ANALYZE
230 ;
231 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS
232 N ZI,ZJ,ZCNT,ZIDX,ZCAT,ZATR,ZTOT
233 S ZCBASE=$NA(@RIMBASE@("RIMTBL","CATS")) ; BASE OF CATEGORIES
234 S ZPBASE=$NA(@RIMBASE@("RIMTBL","PATS")) ; BASE OF PATIENTS
235 S ZTOT=0 ; INITIALIZE OVERALL TOTAL
236 F ZI=1:1:@ZCBASE@(0) D ; FOR ALL CATS
237 . S ZCNT=0
238 . S ZATR=@ZCBASE@(ZI) ; THE ATTRIBUTE OF THE CATEGORY
239 . S ZCAT=$P(@ZCBASE@(ZATR),"^",1) ; USE IT TO LOOK UP THE CATEGORY NAME
240 . ; S ZIDX=$O(@ZPBASE@(ZCAT,"")) ; FIRST PATIENT IN LIST
241 . ; F ZJ=0:0 D Q:$O(@ZPBASE@(ZCAT,ZIDX))="" ; ALL PATIENTS IN THE LISTS
242 . ; . S ZCNT=ZCNT+1 ; INCREMENT THE COUNT
243 . ; . W ZCAT," DFN:",ZIDX," COUNT:",ZCNT,!
244 . ; . S ZIDX=$O(@ZPBASE@(ZCAT,ZIDX))
245 . S ZCNT=$$CNTLST($NA(@ZPBASE@(ZCAT)))
246 . S $P(@ZCBASE@(ZATR),"^",2)=ZCNT ; UPDATE THE COUNT IN THE CAT RECORD
247 . S ZTOT=ZTOT+ZCNT
248 W "TOTAL: ",ZTOT,!
249 Q
250 ;
251CNTLST(INLST) ; RETURNS THE NUMBER OF ELEMENTS IN THE LIST
252 ; INLST IS PASSED BY NAME
253 N ZI,ZDX,ZCOUNT
254 W INLST,!
255 S ZCOUNT=0
256 S ZDX=""
257 F ZI=$O(@INLST@(ZDX)):0 D Q:$O(@INLST@(ZDX))="" ; LOOP UNTIL THE END
258 . S ZCOUNT=ZCOUNT+1
259 . S ZDX=$O(@INLST@(ZDX))
260 . W "ZDX:",ZDX," ZCNT:",ZCOUNT,!
261 Q ZCOUNT
262 ;
263XCPAT(CPATCAT,CPATPARM) ; EXPORT TO FILE ALL PATIENTS IN CATEGORY CPATCAT
264 ;
265 I '$D(CPATPARM) S CPATPARM=""
266 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS
267 N ZI,ZJ,ZC,ZPATBASE
268 S ZPATBASE=$NA(@RIMBASE@("RIMTBL","PATS",CPATCAT))
269 S ZI=""
270 F ZJ=0:0 D Q:$O(@ZPATBASE@(ZI))="" ; TIL END
271 . S ZI=$O(@ZPATBASE@(ZI))
272 . D XPAT^C0CCCR(ZI,CPATPARM) ; EXPORT THE PATIENT TO A FILE
273 Q
274 ;
275CPAT(CPATCAT) ; SHOW PATIENT DFNS FOR A CATEGORY CPATCAT
276 ;
277 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS
278 N ZI,ZJ,ZC,ZPATBASE
279 S ZC=0 ; COUNT FOR SPACING THE PRINTOUT
280 S ZPATBASE=$NA(@RIMBASE@("RIMTBL","PATS",CPATCAT))
281 S ZI=""
282 F ZJ=0:0 D Q:$O(@ZPATBASE@(ZI))="" ; TIL END
283 . S ZI=$O(@ZPATBASE@(ZI))
284 . S ZC=ZC+1 ; INCREMENT OUTPUT PER LINE COUNT
285 . W ZI," "
286 . I ZC=10 D ; NEW LINE
287 . . S ZC=0
288 . . W !
289 Q
290 ;
291PATC(DFN) ; DISPLAY THE CATEGORY FOR THIS PATIENT
292 ;
293 N ATTR S ATTR=""
294 I '$D(^TMP("C0CRIM","ATTR",DFN)) D ; RIM VARS NOT PRESENT
295 . D ANALYZE(DFN,1) ; EXTRACT THE RIM VARIABLE FOR THIS PATIENT
296 S ATTR=^TMP("C0CRIM","ATTR",DFN)
297 I ATTR="" W "THIS PATIENT NOT ANALYZED.",! Q ;NO ATTRIBUTES FOUND
298 I $D(^TMP("C0CRIM","RIMTBL","CATS",ATTR)) D ; FOUND A CAT
299 . N CAT
300 . S CAT=$P(^TMP("C0CRIM","RIMTBL","CATS",ATTR),U,1) ; LOOK UP THE CAT
301 . W CAT,": ",ATTR,!
302 Q
303 ;
304APUSH(AMAP,AVAL) ; ADD AVAL TO ATTRIBUTE MAP AMAP (AMAP PASSED BY NAME)
305 ; AMAP IS FORMED FOR ARRAY ACCESS: AMAP(0) IS THE COUNT
306 ; AND AMAP(N)=AVAL IS THE NTH AVAL
307 ; ALSO HASH ACCESS AMAP(AVAL)=N WHERE N IS THE ASSIGNED ORDER OF THE
308 ; MAP VALUE. INSTANCES OF THE MAP WILL USE $P(X,U,N)=AVAL TO PLACE
309 ; THE ATTRIBUTE IN ITS RIGHT PLACE. THE ATTRIBUTE VALUE IS STORED
310 ; SO THAT DIFFERENT MAPS CAN BE AUTOMATICALLY CROSSWALKED
311 ;
312 I '$D(@AMAP) D ; IF THE MAP DOES NOT EXIST
313 . S @AMAP@(0)=0 ; HAS ZERO ELEMENTS
314 S @AMAP@(0)=@AMAP@(0)+1 ;INCREMENT ELEMENT COUNT
315 S @AMAP@(@AMAP@(0))=AVAL ; ADD THE VALUE TO THE ARRAY
316 S @AMAP@(AVAL)=@AMAP@(0) ; ADD THE VALUE TO THE HASH WITH ARRAY REF
317 Q
318 ;
319ASETUP ; SET UP GLOBALS AND VARS RIMBASE AND RIMTBL
320 I '$D(RIMBASE) S RIMBASE=$NA(^TMP("C0CRIM"))
321 I '$D(@RIMBASE) S @RIMBASE=""
322 I '$D(RIMTBL) S RIMTBL=$NA(^TMP("C0CRIM","RIMTBL","TABLE")) ; ATTR TABLE
323 S ^TMP("C0CRIM","TABLES","RIMTBL")=RIMTBL ; TABLE OF TABLES
324 Q
325 ;
326AINIT ; INITIALIZE ATTRIBUTE TABLE
327 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS
328 K @RIMTBL
329 D APUSH(RIMTBL,"EXTRACTED")
330 D APUSH(RIMTBL,"NOTEXTRACTED")
331 D APUSH(RIMTBL,"HEADER")
332 D APUSH(RIMTBL,"NOPCP")
333 D APUSH(RIMTBL,"PCP")
334 D APUSH(RIMTBL,"PROBLEMS")
335 D APUSH(RIMTBL,"PROBCODE")
336 D APUSH(RIMTBL,"PROBNOCODE")
337 D APUSH(RIMTBL,"PROBDATE")
338 D APUSH(RIMTBL,"PROBNODATE")
339 D APUSH(RIMTBL,"VITALS")
340 D APUSH(RIMTBL,"VITALSCODE")
341 D APUSH(RIMTBL,"VITALSNOCODE")
342 D APUSH(RIMTBL,"VITALSDATE")
343 D APUSH(RIMTBL,"VITALSNODATE")
344 D APUSH(RIMTBL,"IMMUNE")
345 D APUSH(RIMTBL,"IMMUNECODE")
346 D APUSH(RIMTBL,"MEDS")
347 D APUSH(RIMTBL,"MEDSCODE")
348 D APUSH(RIMTBL,"MEDSNOCODE")
349 D APUSH(RIMTBL,"MEDSDATE")
350 D APUSH(RIMTBL,"MEDSNODATE")
351 D APUSH(RIMTBL,"ALERTS")
352 D APUSH(RIMTBL,"ALERTSCODE")
353 D APUSH(RIMTBL,"RESULTS")
354 D APUSH(RIMTBL,"RESULTSLN")
355 Q
356 ;
357APOST(PRSLT,PTBL,PVAL) ; POST AN ATTRIBUTE PVAL TO PRSLT USING PTBL
358 ; PSRLT AND PTBL ARE PASSED BY NAME. PVAL IS A STRING
359 ; PTBL IS THE NAME OF A TABLE IN @RIMBASE@("TABLES") - "RIMTBL"=ALL VALUES
360 ; PVAL WILL BE PLACED IN THE STRING PRSLT AT $P(X,U,@PTBL@(PVAL))
361 I '$D(RIMBASE) D ASETUP ; FOR COMMANDLINE PROCESSING
362 N USETBL
363 I '$D(@RIMBASE@("TABLES",PTBL)) D Q ; NO TABLE
364 . W "ERROR NO SUCH TABLE",!
365 S USETBL=@RIMBASE@("TABLES",PTBL)
366 S $P(@PRSLT,U,@USETBL@(PVAL))=PVAL
367 Q
368GETPA(RTN,DFN,ISEC,IVAR) ; RETURNS ARRAY OF RIM VARIABLES FOR PATIENT DFN
369 ; EXAMPLE: D GETPA(.RT,2,"MEDS","MEDSSTATUSTEXT")
370 ; RETURNS AN ARRAY RT OF VALUES OF MEDSTATUSTEXT FOR PATIENT 2 IN P2
371 ; IN SECTION "MEDS"
372 ; P1 IS THE IEN OF THE MED WITH THE VALUE IE 2^PENDING WOULD BE STATUS
373 ; PENDING FOR MED 2 FOR PATIENT 2
374 ; RT(0) IS THE COUNT OF HOW MANY IN THE ARRAY. NULL VALUES ARE
375 ; RETURNED. RTN IS PASSED BY REFERENCE
376 ;
377 S RTN(0)=0 ; SET NULL DEFAULT RETURN VALUE
378 I '$D(RIMBASE) D AINIT ; INITIALIZE GLOBAL NAMES AND TABLES
379 S ZVBASE=$NA(@RIMBASE@("VARS")) ; BASE OF VARIABLES
380 I '$D(@ZVBASE@(DFN,ISEC,0)) D Q ; NO VARIABLES IN SECTION
381 . W "NO VARIABLES IN THIS SECTION FOR PATIENT ",DFN,!
382 N ZZI,ZZS
383 S ZZS=$NA(@ZVBASE@(DFN,ISEC)) ; SECTION VARIABLE ARRAY FOR THIS PATIENT
384 ; ZWR @ZZS@(1)
385 S RTN(0)=@ZZS@(0)
386 F ZZI=1:1:RTN(0) D ; FOR ALL PARTS OF THIS SECTION ( IE FOR ALL MEDS)
387 . S $P(RTN(ZZI),"^",1)=ZZI ; INDEX FOR VARIABLE
388 . S $P(RTN(ZZI),"^",2)=@ZZS@(ZZI,IVAR) ; THE VALUE OF THE VARIABLE
389 Q
390 ;
391PATD(DFN,ISEC,IVAR) ; DISPLAY FOR PATIENT DFN THE VARIABLE IVAR
392 ;
393 N ZR
394 D GETPA(.ZR,DFN,ISEC,IVAR)
395 I $D(ZR(0)) D PARY^C0CXPATH("ZR")
396 E W "NOTHING RETURNED",!
397 Q
398 ;
399CAGET(RTN,IATTR) ;
400 ; GETPA LOOKS AT RIMTBL TO FIND PATIENTS WITH ATTRIBUTE IATTR
401 ; IT DOES NOT SEARCH ALL PATIENTS, ONLY THE ONES WITH THE ATTRIBUTE
402 ; IT RETURNS AN ARRAY OF THE VALUES OF VARIABLE IVAR IN SECTION ISEC
403 Q
404 ;
405PCLST(LSTRTN,IATTR) ; RETURNS ARRAY OF PATIENTS WITH ATTRIBUTE IATTR
406 ;
407 I '$D(RIMBASE) D AINIT ; INITIALIZE GLOBAL NAMES AND TABLES
408 N ZLST
409 S LSTRTN(0)=0 ; DEFAULT RETURN NONE
410 S ZCBASE=$NA(@RIMBASE@("RIMTBL","CATS")) ; BASE OF CATEGORIES
411 S ZPBASE=$NA(@RIMBASE@("RIMTBL","PATS")) ; BASE OF PATIENTS
412 N ZNC ; ZNC IS NUMBER OF CATEGORIES
413 S ZNC=@ZCBASE@(0)
414 I ZNC=0 Q ; NO CATEGORIES TO SEARCH
415 N ZAP ; ZAP IS THE PIECE INDEX OF THE ATTRIBUTE IN THE RIM ATTR TABLE
416 S ZAP=@RIMBASE@("RIMTBL","TABLE",IATTR)
417 N ZI,ZCATTBL,ZATBL,ZCNT,ZPAT
418 F ZI=1:1:ZNC D ; FOR ALL CATEGORIES
419 . S ZATBL=@ZCBASE@(ZI) ; PULL OUT ATTR TBL FOR CAT
420 . I $P(ZATBL,"^",ZAP)'="" D ; CAT HAS ATTR
421 . . S ZCATTBL=$P(@ZCBASE@(ZATBL),"^",1) ; NAME OF TBL
422 . . M LSTRTN=@ZPBASE@(ZCATTBL) ; MERGE PATS FROM CAT
423 S ZCNT=0 ; INITIALIZE COUNT OF PATIENTS
424 S ZPAT=0 ; START AT FIRST PATIENT IN LIST
425 F S ZPAT=$O(LSTRTN(ZPAT)) Q:ZPAT="" D ;
426 . S ZCNT=ZCNT+1
427 S LSTRTN(0)=ZCNT ; COUNT OF PATIENTS IN ARRAY
428 Q
429 ;
430DCPAT(CATTR) ; DISPLAY LIST OF PATIENTS WITH ATTRIBUTE CATTR
431 ;
432 N ZR
433 D PCLST(.ZR,CATTR)
434 I ZR(0)=0 D Q ;
435 . W "NO PATIENTS RETURNED",!
436 E D ;
437 . D PARY^C0CXPATH("ZR") ; PRINT ARRAY
438 . W "COUNT=",ZR(0),!
439 Q
440 ;
441RPCGV(RTN,DFN,WHICH) ; RPC GET VARS
442 ; RETURNS IN RTN (PASSED BY REFERENCE) THE VARS AND VALUES
443 ; FOUND AT INARY RTN(X)="VAR^VALUE" RTN(0) IS THE COUNT
444 ; DFN IS THE PATIENT NUMBER.
445 ; WHICH IS "ALL","MEDS","VITALS","PROBLEMS","ALERTS","RESULTS","IMMUNE"
446 ; OR OTHER SECTIONS AS THEY ARE ADDED
447 ; THIS IS MEANT TO BE AVAILABLE AS AN RPC
448 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS
449 S ZVBASE=$NA(@RIMBASE@("VARS")) ; BASE OF VARIABLES
450 S RTN(0)=0 ; DEFAULT NOTHING IS RETURNED
451 N ZZGI
452 I WHICH="ALL" D ; VARIABLES FROM ALL SECTIONS
453 . F ZZGI="HEADER","PROBLEMS","VITALS","MEDS","ALERTS","RESULTS","IMMUNE" D ;
454 . . D ZGVWRK(ZZGI) ; DO EACH SECTION
455 . . W "DID ",ZZGI,!
456 E D ZGVWRK(WHICH) ; ONLY ONE SECTION ASKED FOR
457 Q
458 ;
459ZGVWRK(ZWHICH) ; DO ONE SECTION FOR RPCGV
460 ;
461 N ZZGN ; NAME FOR SECTION VARIABLES
462 S ZZGN=$NA(@ZVBASE@(DFN,ZWHICH)) ; BASE OF VARS FOR SECTION
463 I '$D(@ZZGN@(0)) Q ; NO VARS FOR THIS SECTION
464 E D ; VARS EXIST
465 . N ZGVI
466 . F ZGVI=1:1:@ZZGN@(0) D ; FOR EACH MULTIPLE IN SECTION
467 . . K ZZGA N ZZGA ; TEMP ARRAY FOR SECTION VARS
468 . . K ZZGN2 N ZZGN2 ; NAME FOR MULTIPLE
469 . . S ZZGN2=$NA(@ZZGN@(ZGVI))
470 . . W ZZGN2,!,$O(@ZZGN2@("")),!
471 . . D H2ARY^C0CXPATH("ZZGA",ZZGN2,ZGVI) ; CONVERT HASH TO ARRAY
472 . . ; D PARY^C0CXPATH("ZZGA")
473 . . D PUSHA^C0CXPATH("RTN","ZZGA") ; PUSH ARRAY INTO RETURN
474 Q
475 ;
476DPATV(DFN,IWHICH) ; DISPLAY VARS FOR PATIENT DFN THAT ARE MAINTAINED IN C0CRIM
477 ; ALONG WITH SAMPLE VALUES.
478 ; IWHICH IS "ALL","MEDS","VITALS","PROBLEMS","ALERTS","RESULTS","HEADER"
479 N GTMP
480 I '$D(^TMP("C0CRIM","ATTR",DFN)) D ; RIM VARS NOT PRESENT
481 . D ANALYZE(DFN,1) ; REFRESH THE RIM VARIABLES
482 I '$D(IWHICH) S IWHICH="ALL"
483 D RPCGV(.GTMP,DFN,IWHICH)
484 D PARY^C0CXPATH("GTMP")
485 Q
486 ;
487RIM2RNF(R2RTN,DFN,RWHICH) ; CONVERTS RIM VARIABLES TO RNF2 FORMAT
488 ; RETURN IN R2RTN, WHICH IS PASSED BY NAME
489 ; RWHICH IS RIM SECTION TO RETURN, DEFAULTS TO "ALL"
490 ;
491 I '$D(RWHICH) S RWHICH="ALL"
492 ;N R2TMP
493 I '$D(^TMP("C0CRIM","ATTR",DFN)) D ; RIM VARS NOT PRESENT
494 . D ANALYZE(DFN,1) ; REFRESH THE RIM VARIABLES
495 D RPCGV(.R2TMP,DFN,RWHICH) ; RETRIEVE ALL THE VARIABLES I AN ARRAY
496 N R2I,R2J,R2X,R2X1,R2X2,R2Y,R2Z
497 F R2I=1:1:R2TMP(0) D ; FOR EVERY LINE OF THE ARRAY
498 . S R2X=$P(R2TMP(R2I),"^",1) ; OCCURANCE
499 . S R2Y=$P(R2TMP(R2I),"^",2) ; VARIABLE NAME
500 . I $L(R2Y)<4 Q ; SKIP SHORT VARIABLES (THEY ARE FOR DEBUGGING)
501 . S R2Z=$P(R2TMP(R2I),"^",3) ; VALUE
502 . I R2X[";" D ; THERES MULTIPLES
503 . . S R2X1=$P(R2X,";",1) ; FIRST INDEX
504 . . S R2X2=$P(R2X,";",2) ; SECOND INDEX
505 . . S R2J=R2Y_"["_R2X2_"]" ; BUILD THE VARIABLE NAME
506 . . S @R2RTN@("F",R2J,1)="" ; PUT VARIABLE NAME IN FIELD MAP
507 . . S @R2RTN@("V",R2X1,R2J,1)=R2Z ; PUT THE VALUE IN THE ARRAY
508 . E D ; NO SUB-MULTIPLES
509 . . S @R2RTN@("F",R2Y,1)="" ; PUT VARIABLE NAME IN FIELD MAP
510 . . S @R2RTN@("V",R2X,R2Y,1)=R2Z ; PUT THE VALUE IN THE ARRAY
511 Q
512 ;
513RIM2CSV(DFN) ; WRITE THE RIM VARIABLES FOR A PATIENT TO A CSV FILE
514 ;
515 N R2CTMP,R2CARY
516 D RIM2RNF("R2CTMP",DFN) ; CONVERT VARIABLES TO RNF FORMAT
517 D RNF2CSV^C0CRNF("R2CARY","R2CTMP","NV") ; CONVERT RNF TO CSV FORMAT
518 D FILEOUT^C0CRNF("R2CARY","VARS-"_DFN_".csv")
519 Q
520 ;
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