GPLALABS ; CCDCCR/GPL - CCR/CCD PROCESSING FOR LAB RESULTS ; 10/01/08 ;;0.3;CCDCCR;nopatch;noreleasedate ;Copyright 2008 WorldVistA. Licensed under the terms of the GNU ;General Public License See attached copy of the License. ; ;This program is free software; you can redistribute it and/or modify ;it under the terms of the GNU General Public License as published by ;the Free Software Foundation; either version 2 of the License, or ;(at your option) any later version. ; ;This program is distributed in the hope that it will be useful, ;but WITHOUT ANY WARRANTY; without even the implied warranty of ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ;GNU General Public License for more details. ; ;You should have received a copy of the GNU General Public License along ;with this program; if not, write to the Free Software Foundation, Inc., ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ; EXTRACT(LABXML,DFN,LABOUTXML) ; EXTRACT LABS INTO PROVIDED XML TEMPLATE ; ; LABXML AND LABOUTXML ARE PASSED BY NAME SO GLOBALS CAN BE USED ; ; ; D GHL7 ; GET HL7 MESSAGE FOR THIS PATIENT S C0CLB=$NA(^TMP("GPLCCR",$J,"LABS")) ; BASE GLB FOR LABS VARS K @C0CLB ; CLEAR OUT OLD VARS IF ANY S C0CSILENT=1 ; SURPRESS LISTING D LIST ; EXTRACT THE VARIABLES Q ; GHL7 ; GET HL7 MESSAGE FOR LABS FOR THIS PATIENT ; N C0CPTID,C0CSPC,C0CSDT,C0CEDT,C0CR ; SET UP FOR LAB API CALL S C0CPTID=$$SSN^CCRDPT(DFN) ; GET THE SSN FOR THIS PATIENT I C0CPTID="" D Q ; NO SSN, COMPLAIN AND QUIT . W "LAB LOOKUP FAILED, NO SSN",! S C0CSPC="*" ; LOOKING FOR ALL LABS D DT^DILF(,"T-5000",.C0CSDT) ; START DATE LONG AGO TO GET EVERYTHING D DT^DILF(,"T",.C0CEDT) ; END DATE TODAY TO GET EVERYTHING S C0CR=$$GCPR^LA7QRY(C0CPTID,C0CSDT,C0CEDT,C0CSPC,C0CSPC) ; CALL LAB LOOKUP Q ; LIST ; LIST THE HL7 MESSAGE ; ; N C0CI,C0CJ,C0COBT,C0CHB,C0CVAR ; D EXTRACT^GPLLABS(,1,) I '$D(C0CLB) S C0CLB=$NA(^TMP("GPLCCR",$J,"LABS")) ; BASE GLB FOR LABS VARS I '$D(C0CSILENT) S C0CSILENT=0 I '$D(DFN) S DFN=1 ; DEFAULT TEST PATIENT I '$D(^KVAI(0)) D SETTBL ; INITIALIZE LAB TABLE I ^KBAI(0)'="V1" D SETTBL ; NEED NEWEST VERSION I '$D(^TMP("HLS",$J,1)) D GHL7 ; GET HL7 MGS IF NOT ALREADY DONE S C0CTAB=$NA(^KBAI) ; BASE OF OBX TABLE S C0CHB=$NA(^TMP("HLS",$J)) S C0CI="" S @C0CLB@(0)=0 ; INITALIZE RESULTS VARS COUNT F S C0CI=$O(@C0CHB@(C0CI)) Q:C0CI="" D ; FOR ALL RECORDS IN HL7 MSG . K C0CVAR,XV ; CLEAR OUT VARIABLE VALUES . S C0CTYP=$P(@C0CHB@(C0CI),"|",1) . D LTYP(@C0CHB@(C0CI),C0CTYP,.C0CVAR,C0CSILENT) . M XV=C0CVAR ; . I C0CTYP="OBR" D ; BEGINNING OF NEW SECTION . . S @C0CLB@(0)=@C0CLB@(0)+1 ; INCREMENT COUNT . . S C0CLI=@C0CLB@(0) ; INDEX FOR THIS RESULT . . M @C0CLB@(C0CLI)=C0CVAR ; PERSIST THE OBR VARS . . S C0CLOBX=0 ; MARK THE BEGINNING OF A NEW SECTION . I C0CTYP="OBX" D ; SPECIAL CASE FOR OBX3 . . ; RESULTTESTCODEVALUE . . ; RESULTTESTDESCRIPTIONTEXT . . I C0CVAR("C3")="LN" D ; PRIMARY CODE IS LOINC . . . S XV("RESULTTESTCODEVALUE")=C0CVAR("C1") ; THE LOINC CODE VALUE . . . S XV("RESULTTESTCODINGSYSTEM")="LOINC" ; DISPLAY NAME FOR LOINC . . . S XV("RESULTTESTDESCRIPTIONTEXT")=C0CVAR("C2") ; DESCRIPTION TEXT . . E I C0CVAR("C6")="LN" D ; SECONDARY CODE IS LOINC . . . S XV("RESULTTESTCODEVALUE")=C0CVAR("C4") ; THE LOINC CODE VALUE . . . S XV("RESULTTESTCODINGSYSTEM")="LOINC" ; DISPLAY NAME FOR LOINC . . . S XV("RESULTTESTDESCRIPTIONTEXT")=C0CVAR("C5") ; DESCRIPTION TEXT . . E I C0CVAR("C6")'="" D ; NO LOINC CODES, USE SECONDARY IF PRESENT . . . S XV("RESULTTESTCODEVALUE")=C0CVAR("C4") ; SECONDARY CODE VALUE . . . S XV("RESULTTESTCODINGSYSTEM")=C0CVAR("C6") ; SECONDARY CODE NAME . . . S XV("RESULTTESTDESCRIPTIONTEXT")=C0CVAR("C5") ; SECONDARY TEXT . . E D ; NO SECONDARY, USE PRIMARY . . . S XV("RESULTTESTCODEVALUE")=C0CVAR("C1") ; PRIMARY CODE VALUE . . . S XV("RESULTTESTCODINGSYSTEM")=C0CVAR("C3") ; PRIMARY DISPLAY NAME . . . S XV("RESULTTESTDESCRIPTIONTEXT")=C0CVAR("C2") ; USE PRIMARY TEXT . . I 'C0CSILENT D ; . . . ZWR XV . I C0CTYP="OBX" D ; PROCESS TEST RESULTS . . I C0CLOBX=0 D ; FIRST TEST RESULT FOR THIS SECTION . . . S C0CLB2=$NA(@C0CLB@(C0CLI,"M","TESTS")) ; INDENT FOR TEST RESULTS . . S C0CLOBX=C0CLOBX+1 ; INCREMENT TEST COUNT . . S @C0CLB2@(0)=C0CLOBX ; STORE THE TEST COUNT . . M @C0CLB2@(C0CLOBX)=XV ; PERSIST THE TEST RESULT VARIABLES . I 'C0CSILENT D ; . . W C0CI," ",C0CTYP,! . ; S C0CI=$O(@C0CHB@(C0CI)) K ^TMP("GPLRIM","VARS",DFN,"LABS") M ^TMP("GPLRIM","VARS",DFN,"LABS")=@C0CLB Q LTYP(OSEG,OTYP,OVARA,OC0CSILENT) ; S OTAB=$NA(@C0CTAB@(OTYP)) ; TABLE FOR SEGMENT TYPE I '$D(OC0CSILENT) S C0CSILENT=0 ; NOT C0CSILENT IS DEFAULT E S C0CSILENT=OC0CSILENT ; ACCEPT C0CSILENT FLAG I 1 D ; FOR HL7 SEGMENT TYPE . S OI="" ; INDEX INTO FIELDS IN SEG . F S OI=$O(@OTAB@(OI)) Q:OI="" D ; FOR EACH FIELD OF THE SEGMENT . . S OTI=$P(@OTAB@(OI),"^",1) ; TABLE INDEX . . S OVAR=$P(@OTAB@(OI),"^",4) ; CCR VARIABLE IF DEFINED . . S OV=$P(OSEG,"|",OTI+1) ; PULL OUT VALUE . . I $P(OI,";",2)'="" D ; THIS IS DEFINING A SUB-VALUE . . . S OI2=$P(OTI,";",2) ; THE SUB-INDEX . . . S OV=$P(OV,"^",OI2) ; PULL OUT SUB-VALUE . . I OVAR'="" S OVARA(OVAR)=OV ; PASS BACK VARIABLE AND VALUE . . I 'C0CSILENT D ; PRINT OUTPUT IF C0CSILENT IS FALSE . . . I OV'="" W OI_": "_$P(@OTAB@(OI),"^",3),": ",OVAR,": ",OV,! Q LOBX ; Q ; SETTBL ; K X ; CLEAR X S X("PID","PID1")="1^00104^Set ID - Patient ID" S X("PID","PID2")="2^00105^Patient ID (External ID)" S X("PID","PID3")="3^00106^Patient ID (Internal ID)" S X("PID","PID4")="4^00107^Alternate Patient ID" S X("PID","PID5")="5^00108^Patient's Name" S X("PID","PID6")="6^00109^Mother's Maiden Name" S X("PID","PID7")="7^00110^Date of Birth" S X("PID","PID8")="8^00111^Sex" S X("PID","PID9")="9^00112^Patient Alias" S X("PID","PID10")="10^00113^Race" S X("PID","PID11")="11^00114^Patient Address" S X("PID","PID12")="12^00115^County Code" S X("PID","PID13")="13^00116^Phone Number - Home" S X("PID","PID14")="14^00117^Phone Number - Business" S X("PID","PID15")="15^00118^Language - Patient" S X("PID","PID16")="16^00119^Marital Status" S X("PID","PID17")="17^00120^Religion" S X("PID","PID18")="18^00121^Patient Account Number" S X("PID","PID19")="19^00122^SSN Number - Patient" S X("PID","PID20")="20^00123^Drivers License - Patient" S X("PID","PID21")="21^00124^Mother's Identifier" S X("PID","PID22")="22^00125^Ethnic Group" S X("PID","PID23")="23^00126^Birth Place" S X("PID","PID24")="24^00127^Multiple Birth Indicator" S X("PID","PID25")="25^00128^Birth Order" S X("PID","PID26")="26^00129^Citizenship" S X("PID","PID27")="27^00130^Veteran.s Military Status" S X("PID","PID28")="28^00739^Nationality" S X("PID","PID29")="29^00740^Patient Death Date/Time" S X("PID","PID30")="30^00741^Patient Death Indicator" S X("NTE","NTE1")="1^00573^Set ID - NTE" S X("NTE","NTE2")="2^00574^Source of Comment" S X("NTE","NTE3")="3^00575^Comment" S X("ORC","ORC1")="1^00215^Order Control" S X("ORC","ORC2")="2^00216^Placer Order Number" S X("ORC","ORC3")="3^00217^Filler Order Number" S X("ORC","ORC4")="4^00218^Placer Order Number" S X("ORC","ORC5")="5^00219^Order Status" S X("ORC","ORC6")="6^00220^Response Flag" S X("ORC","ORC7")="7^00221^Quantity/Timing" S X("ORC","ORC8")="8^00222^Parent" S X("ORC","ORC9")="9^00223^Date/Time of Transaction" S X("ORC","ORC10")="10^00224^Entered By" S X("ORC","ORC11")="11^00225^Verified By" S X("ORC","ORC12")="12^00226^Ordering Provider" S X("ORC","ORC13")="13^00227^Enterer's Location" S X("ORC","ORC14")="14^00228^Call Back Phone Number" S X("ORC","ORC15")="15^00229^Order Effective Date/Time" S X("ORC","ORC16")="16^00230^Order Control Code Reason" S X("ORC","ORC17")="17^00231^Entering Organization" S X("ORC","ORC18")="18^00232^Entering Device" S X("ORC","ORC19")="19^00233^Action By" S X("OBR","OBR1")="1^00237^Set ID - Observation Request" S X("OBR","OBR2")="2^00216^Placer Order Number" S X("OBR","OBR3")="3^00217^Filler Order Number" S X("OBR","OBR4")="4^00238^Universal Service ID" S X("OBR","OBR4;LOINC")="4;1^00238^Universal Service ID - LOINC^RESULTCODE" S X("OBR","OBR4;DESC")="4;2^00238^Universal Service ID - DESC^RESULTDESCRIPTIONTEXT" S X("OBR","OBR4;VACODE")="4;3^00238^Universal Service ID - VACODE" S X("OBR","OBR5")="5^00239^Priority" S X("OBR","OBR6")="6^00240^Requested Date/Time" S X("OBR","OBR7")="7^00241^Observation Date/Time^RESULTASSESSMENTDATETIME" S X("OBR","OBR8")="8^00242^Observation End Date/Time" S X("OBR","OBR9")="9^00243^Collection Volume" S X("OBR","OBR10")="10^00244^Collector Identifier" S X("OBR","OBR11")="11^00245^Specimen Action Code" S X("OBR","OBR12")="12^00246^Danger Code" S X("OBR","OBR13")="13^00247^Relevant Clinical Info." S X("OBR","OBR14")="14^00248^Specimen Rcv'd. Date/Time" S X("OBR","OBR15")="15^00249^Specimen Source" S X("OBR","OBR16")="16^00226^Ordering Provider XCN^RESULTSOURCEACTORID" S X("OBR","OBR17")="17^00250^Order Callback Phone Number" S X("OBR","OBR18")="18^00251^Placers Field 1" S X("OBR","OBR19")="19^00252^Placers Field 2" S X("OBR","OBR20")="20^00253^Filler Field 1" S X("OBR","OBR21")="21^00254^Filler Field 2" S X("OBR","OBR22")="22^00255^Results Rpt./Status Change" S X("OBR","OBR23")="23^00256^Charge to Practice" S X("OBR","OBR24")="24^00257^Diagnostic Service Sect" S X("OBR","OBR25")="25^00258^Result Status^RESULTSTATUS" S X("OBR","OBR26")="26^00259^Parent Result" S X("OBR","OBR27")="27^00221^Quantity/Timing" S X("OBR","OBR28")="28^00260^Result Copies to" S X("OBR","OBR29")="29^00261^Parent Number" S X("OBR","OBR30")="30^00262^Transportation Mode" S X("OBR","OBR31")="31^00263^Reason for Study" S X("OBR","OBR32")="32^00264^Principal Result Interpreter" S X("OBR","OBR33")="33^00265^Assistant Result Interpreter" S X("OBR","OBR34")="34^00266^Technician" S X("OBR","OBR35")="35^00267^Transcriptionist" S X("OBR","OBR36")="36^00268^Scheduled Date/Time" S X("OBR","OBR37")="37^01028^Number of Sample Containers" S X("OBR","OBR38")="38^38^01029 Transport Logistics of Collected Sample" S X("OBR","OBR39")="39^01030^Collector.s Comment" S X("OBR","OBR40")="40^01031^Transport Arrangement Responsibility" S X("OBR","OBR41")="41^01032^Transport Arranged" S X("OBR","OBR42")="42^01033^Escort Required" S X("OBR","OBR43")="43^01034^Planned Patient Transport Comment" S X("OBX","OBX1")="1^00559^Set ID - OBX" S X("OBX","OBX2")="2^00676^Value Type" S X("OBX","OBX3")="3^00560^Observation Identifier" S X("OBX","OBX3;C1")="3;1^00560^Observation Identifier^C1" S X("OBX","OBX3;C2")="3;2^00560^Observation Identifier^C2" S X("OBX","OBX3;C3")="3;3^00560^Observation Identifier^C3" S X("OBX","OBX3;C4")="3;4^00560^Observation Identifier^C4" S X("OBX","OBX3;C5")="3;5^00560^Observation Identifier^C5" S X("OBX","OBX3;C6")="3;6^00560^Observation Identifier^C6" S X("OBX","OBX4")="4^00769^Observation Sub-Id" S X("OBX","OBX5")="5^00561^Observation Results^RESULTTESTVALUE" S X("OBX","OBX6")="6^00562^Units^RESULTTESTUNITS" S X("OBX","OBX7")="7^00563^Reference Range^RESULTTESTNORMALDESCRIPTIONTEXT" S X("OBX","OBX8")="8^00564^Abnormal Flags" S X("OBX","OBX9")="9^00639^Probability" S X("OBX","OBX10")="10^00565^Nature of Abnormal Test" S X("OBX","OBX11")="11^00566^Observ. Result Status^RESULTTESTSTATUSTEXT" S X("OBX","OBX12")="12^00567^Date Last Normal Value" S X("OBX","OBX13")="13^00581^User Defined Access Checks" S X("OBX","OBX14")="14^00582^Date/Time of Observation^RESULTTESTDATETIME" S X("OBX","OBX15")="15^00583^Producer.s ID^RESULTTESTSOURCEACTORID" S X("OBX","OBX16")="16^00584^Responsible Observer" S X("OBX","OBX17")="17^00936^Observation Method" M ^KBAI=X ; SET VALUES IN ^KBAI S ^KBAI(0)="V1" Q ;