[1001] | 1 | #!/bin/bash/
|
---|
| 2 | #The following files must be in the same directory as the QRDA files being processed:
|
---|
| 3 | #MeasuresAndReportingParametersWithVariables.xml
|
---|
| 4 | #MEASURES-BY-PATIENT.txt
|
---|
| 5 | #This script
|
---|
| 6 |
|
---|
| 7 |
|
---|
| 8 | for MyFile in $(ls -1 /home/nancy/CCR-Template/QRDA/PAT_*_QRDA_V1_0_0-11-04-2010_21.xml);
|
---|
| 9 | do
|
---|
| 10 | StructuredBodyLine=$(grep -n "<structuredBody" "$MyFile" | awk -F: '{ print $1 }')
|
---|
| 11 | echo "structuredBody Line number is $StructuredBodyLine"
|
---|
| 12 | a="$(($StructuredBodyLine+2))"
|
---|
| 13 | b="$(($StructuredBodyLine+5))"
|
---|
| 14 | #In or for Saxon to do its work, the file it works on must be valid, so 3 sets of component/section tags were added to allow for those that will be replaced when the Measures and reporting parameters section is replaced in the file. They need to be deleted. The <MeasuresSection/> tag is added in the Header/Parameter document to anchor the replacement. IT will be deleted when the section is put into the file
|
---|
| 15 | echo "a is $a start line to delete for <components>/<section> pairs"
|
---|
| 16 | echo "b is $b end line to delete"
|
---|
| 17 | echo "$MyFile"
|
---|
| 18 | #We can either put this next line in after the fact or before. Currently it is before
|
---|
| 19 | #sed -in '/structuredBody/{ s/$/\n<MeasuresSection\/>/ }' "$MyFile"
|
---|
| 20 | #sed -in "$c"s/<MeasuresSection\/>//p "$MyFile"
|
---|
| 21 | #MS=$(cat MeasuresAndReportingParametersWithVariables.xml)
|
---|
| 22 | sed -in "$a","$b"d "$MyFile"
|
---|
| 23 | #insert the contents of this file after the structured body line
|
---|
| 24 | sed -in '/MeasuresSection/r MeasuresAndReportingParametersWithVariables.xml' "$MyFile"
|
---|
| 25 | sed -in s/\<MeasuresSection\\/\>// "$MyFile"
|
---|
| 26 | done
|
---|
| 27 |
|
---|
| 28 |
|
---|
| 29 | rm -rf /home/nancy/CCR-Template/QRDA/PAT*.xmln
|
---|
| 30 |
|
---|
| 31 | NewFunction()
|
---|
| 32 | {
|
---|
| 33 | File="PAT_$1_QRDA_V1_0_0-11-04-2010_21.xml"
|
---|
| 34 | shift
|
---|
| 35 | while [ "0" != "$#" ]
|
---|
| 36 | do
|
---|
| 37 | echo "Now I am in the function"
|
---|
| 38 | echo "$File"
|
---|
| 39 | echo "$1"
|
---|
| 40 | sed -in "s/<!--@@@$1-Tpl@@@//" "$File"
|
---|
| 41 | sed -in "s/<!--@@@$1-Item@@@//" "$File"
|
---|
| 42 | sed -in "s/<!--@@@$1-Act@@@//" "$File"
|
---|
| 43 | sed -in "s/<!--@@@M-Set2011@@@//" "$File"
|
---|
| 44 | sed -in "s/@@@@$1-Tpl@@@@-->//" "$File"
|
---|
| 45 | sed -in "s/@@@@$1-Item@@@@-->//" "$File"
|
---|
| 46 | sed -in "s/@@@@$1-Act@@@@-->//" "$File"
|
---|
| 47 | sed -in "s/@@@@M-Set2011@@@@-->//" "$File"
|
---|
| 48 | sed -in "s/<!--@@@M-Param2011@@@//" "$File"
|
---|
| 49 | sed -in "s/@@@@M-Param2011@@@@//" "$File"
|
---|
| 50 |
|
---|
| 51 | shift
|
---|
| 52 | done
|
---|
| 53 | }
|
---|
| 54 |
|
---|
| 55 | while read Line ;
|
---|
| 56 | do
|
---|
| 57 | echo "$Line"
|
---|
| 58 |
|
---|
| 59 | NewFunction $Line
|
---|
| 60 | done < "MEASURES-BY-PATIENT.txt"
|
---|
| 61 |
|
---|
| 62 | rm -rf /home/nancy/CCR-Template/QRDA/PAT*.xmln
|
---|