English French Notes Complete/Exclude ONCO SUSPENSE-ALL/TERMDIG-HDR ONCO SUSPENSE-HDR ONCO SUSPENSE/TERMDIG ONCO SUSPENSE/TERMDIG-HDR ONCO TOPOG BY SITEGRP ONCO TOPOG SITES ONCO TOPOGRAPHY BY CODE ONCO TREATMENT ONCO WORKSHEET ONCO XABSTRACT RECORD ONCO XADMISSION ONCO XCONTACT LIST ONCO XDEATH INFO ONCO XINCIDENCE RPRT ONCO XPATIENT CONTACTS ONCO XPATIENT DATA ONCO XPATIENT INFO ONCO XPATIENT STATUS ONCO XSITE PARAMETERS ONCOLOGY INPUT TEMPLATE LIST ONCOLOGY OPTION LIST ONCOLOGY PRINT TEMPLATE LIST ONCOLOGY ROUTINE LIST ONCOLOGY SORT TEMPLATE LIST ONCOS ANNUAL SUMMARY RPT ONCOS ANNUAL SUMMARY RPT-HDR ONCO ABSTINCOM-TERMDIG ONCO ABSTRACT DATE/COMPLETE ONCO ABSTRACT RECORD ONCO ANN/ANAL/STA/SITE/DX AGE ONCO ANNUAL ACOSACCREG80 ONCO ANNUAL ANALYTIC ONCO ANNUAL CLASS/SITE ONCO ICDO-SITE ONCO LOSTTOFOLLOWUP ONCO PCE ANNUAL REPORT ONCO STAGE/SITE ONCO SUSPENSE-NO PRIMARY ONCOLOGY SITE/GROUP-TOPOGRAPHY ONCOS ANAL/STAGE 0 ONCOS ANAL/STAGE I ONCOS ANAL/STAGE II ONCOS ANAL/STAGE III ONCOS ANAL/STAGE IV ONCOS ANAL/STAGE NA ONCOS ANAL/STAGE U ONCOS ANALYTIC ONCOS ANALYTIC-140 ONCOS ANALYTIC-153 ONCOS ANALYTIC-154 ONCOS ANALYTIC-160 ONCOS ANALYTIC-161 ONCOS ANALYTIC-162 ONCOS ANALYTIC-193 ONCOS ANALYTIC-196 ONCOS ANALYTIC_NON ONCOS ANNUAL ANAL/STAGE 0 ONCOS ANNUAL ANAL/STAGE I ONCOS ANNUAL ANAL/STAGE II ONCOS ANNUAL ANAL/STAGE III ONCOS ANNUAL ANAL/STAGE IV ONCOS ANNUAL ANAL/STAGE NA ONCOS ANNUAL ANAL/STAGE U ONCOS ANNUAL-ALLCASES ONCOS ANNUAL-ANALYTIC ONCOS ANNUAL-NON ANAL ONCOS ANNUAL/ANAL-90 ONCOS BLACK-FEMALES ONCOS BLACK-MALES ONCOS KAPOSI ONCOS LARYNX/AN/90 ONCOS LUNG/NON-SMALL CELL ONCOS MEMPHIS LUNG ONCOS NON-ANALYTIC ONCOS RACE=BLACK ONCOS RACE=WHITE ONCOS RANGE-ALLCASES ONCOS RANGE-ANALYTIC ONCOS RANGE-NON ANAL ONCOS SEX=FEMALE ONCOS SEX=MALE ONCOS SITE=BLADDER ONCOS SITE=BRAIN ONCOS SITE=BREAST ONCOS SITE=COLON ONCOS SITE=ESOHAGUS ONCOS SITE=HODGKIN'S ONCOS SITE=HODGKINS ONCOS SITE=LARYNX ONCOS SITE=LIP ONCOS SITE=LIVER ONCOS SITE=LUNG ONCOS SITE=LYMPH NODES ONCOS SITE=NON-HODGKINS ONCOS SITE=NON-HODGKINS'S ONCOS SITE=PHARYNX ONCOS SITE=PROSTATE ONCOS SITE=TESTIS ONCOS TOTAL-ANAL ONCOS TOTAL-NON ONCOS TX-CHEMO ONCOS TX-HORMONE ONCOS TX-RADIATION ONCOS TX-SURGERY ONCOS WHITE-FEMALES ONCOS WHITE-MALES ONCOZ LUNG SURVIVAL .01///Not stated @75,INTERNAL(#3),#75,+12;S1;C27,@TERMINAL DIGIT;S1 @75,INTERNAL(#3),75,.01,@TERMINAL DIGIT;S1 This option produces a list for requesting all charts that are currently in suspense. @75,INTERNAL(#3),@NO PRIMARY;L1,NAME The FOLLOW-UP STATUS will be changed from ACTIVE to (LTF). After 15 months the patient is considered LOST TO FOLLOW-UP. For a complete register: START WITH ACC/SEQ NUMBER: FIRST// For a single accession year (e.g. 1999): START WITH ACC/SEQ NUMBER: FIRST// 1999-00000 GO TO ACC/SEQ NUMBER: LAST// 1999-99999 For a single patient (e.g. 1999-00001): GO TO ACC/SEQ NUMBER: LAST// 1999-00001/99 Select Patient Name: Converting the following fields in the Oncology Primary file: REPORTING HOSPITAL .03 POSTAL CODE AT DIAGNOSIS 9 STATE AT DIAGNOSIS 16 NON CANCER-DIRECTED SURGERY 58.1 CANCER-DIRECTED SURGERY 58.2 TYPE OF FIRST RECURRENCE 71 TYPE OF SUBSEQUENT RECURRENCE 165.572,.02 Re-indexing the AY, AAY, and ACAY cross-references on the ACCESSION YEAR (165.5,.07) field SINGLE LN>2cm-5cm/ MULT Nn<5cm Converting pointers to the ONCOLOGY CONTACT (165) file to pointers to the new ACOS NUMBER (160.19) file... Pointers to the following entries in the ONCOLOGY CONTACT (165) file could not be converted to point to the new ACOS NUMBER (160.19) file due to missing or invalid ACOS number data in the COMMENTS field (#3) of the ONCOLOGY CONTACT file: entry in the COMMENTS field (#3) of the ONCOLOGY CONTACT file that could not be found in the ACOS NUMBER file: # not found Please ask the ONCOLOGY ADPAC to enter the correct ACOS numbers for the above entries in the COMMENTS field (#3) of the ONCOLOGY CONTACT (165) file. Enter the ACOS number in the format '#nnnnnn' where 'nnnnnn' is the 6-digit ACOS number, e.g. '#431910'. For an ONCOLOGY CONCTACT that does not have an assigned ACOS number, enter a single '#' character and an entry will be added to the ACOS NUMBER file with a computed ACOS number. When the correct numbers (or '#' characters) have been entered in the COMMENTS field, re-run the conversion by entering D ^ONCOPST1. Continue this process until there are no exceptions. No conversion exceptions. Cleaning up duplicate entries in ONCOLOGY CONTACT (#165) file... Over-ride Age/Site/Morph.: Over-ride SS/NodesPos....: Over-ride SeqNo/DxConf...: Over-ride SS/TNM-N.......: Over-ride Site/Lat/SeqNo.: Over-ride SS/TNM-M.......: Over-ride Surg/DxConf....: Over-ride SS/DisMet1.....: Over-ride Site/Type......: Over-ride Acsn/Class/Seq.: Over-ride Histology......: Over-ride HospSeq/DxConf.: Over-ride Report Source..: Over-ride COC-Site/Type..: Over-ride Ill-define Site: Over-ride HospSeq/Site...: Over-ride Leuk, Lymphoma.: Over-ride Site/TNM-StgGrp: Over-ride Site/Behavior..: Over-ride Site/EOD/DX Dt.: Over-ride Site/Lat/EOD...: Over-ride Site/Lat/Morph.: CROSS TABS for ANNUAL Reports requires definition of YEAR and Row for all TABLES Select YEAR for Cross Tab Reports Specify Time Frame for Total Registry Year for Annual Report is: Complete Registry is Definitions OK Select Row -QUE ('Q') to run this report at night. -Ask your IRM for the appropriate time. Select Device to Print Annual Cross Tabs: ONCOLOGY ANNUAL CROSS TABS NON ANAL ONCOS RANGE- ONCOS ANNUAL- ONCOS ANAL/STAGE ONCOS ANNUAL ANAL/STAGE ONCOLOGY PRIMARY CLASS CATEGORY CROSS TABS for Total Registry Select CLASS Category Using ICDO-SITE for Rows...Select column: ICDO-SITE Select Column ;11:CLASS CATEGORY;12:ALL of the ABOVE ;11:STAGE GROUPING-AJCC;12:TREATMENT PLAN;13:SUMMARY STAGE;14:HISTOLOGY (ICD-O-3);15:ALL of the ABOVE CROSS TABS: Cases in Registry Years: Conditions OK QUE ('Q') report unless to 'home' device Select Device to Print Cross Tabs: ONCOLOGY CROSS TABS ALL 165.5^ONCOLOGY PRIMARY^ONCO(165.5, ONCOS TOTAL- Select File to Search: Select ROW field: Select Column field: Select Search Template: This option will print cross-tabs for ALL ANALYTIC cases for TREATMENT by STAGE groups (I,II,III,IV) ONCOLOGY STG/TX ANAL/STAGE ONCOS ANNUAL- GP- AJCC SUMMARY STAGE ONCOSCSQ v1.0 - Chi-square analysis Enter the number of rows Enter the number of cols Row Can't complete Chi-square test! CAUTION: cells have expected freq < 5 cells have expected freq < 1 Chi Sq: Contingency Coeff: Fisher's exact test: Chi Sq = ONCOLOGY Version 2 - Cross-tabs Select device to Print Cross Tabs: CROSS TAB ROUTINES CREATE your own Cross-Tab Reports!! 1 - Select File (usually Primary) 2 - Select a field for the ROW 3 - Select a field for the Column 4 - Optional: choose Column cutpoints 5 - Choose a SEARCH template to select cases REMEMBER - type a '?' for HELP!! Select File to Search ONCOLOGY Select Row (field for Cross Tabs) We will build Crosstabs on entries in Select Search template to filter cases Cases will cover entire registry - OK Select Search Template (Type ONCOS for list): REMINDER: Run Define Search Criteria option to be sure selected entries are up-to-date!! The Primary File contains the 'cancer case' data. The Oncology Patient File contains demographic data, Patient history, and Followup History. The Contact File contains the contacts for all patients. Do a Chi-square test? No// Do a Chi-square test? No// Chi-square is a statistical test for tables Print Percents Enter 'Y' to include total percents One Two -Way Table with for Rows Values for Columns Entries in Search Template ALL Cases OK? Yes// You may enter cutpoints for this variable: E.g., enter '4:7:12:30' to count the values Define CUTPOINTS: ERROR = ' ' ~ Try Again! Cutpoints not properly defined Use increasing or decreasing numbers Must have ':' as delimiter only!! Cutpoints are used to partition data into groups where there is no computed field like 'AGE GROUP'. Use a series of increasing or decreasing numbers separated by colons (':') to create the RANGE. Press Return for next table or '^' to Exit: GT Press 'Return/Enter' to continue, '^' to Exit: Cross Tabs RSUM:, 'Row Number) = Row sum SEARCH TEMPLATE: Use a SEARCH TEMPLATE? Yes// Use a SEARCH TEMPLATE to restrict cases Restrict cases with a SEARCH TEMPLATE Select SEARCH TEMPLATE: must be a SEARCH template does not have stored entries you must run FM Search Option for this template. REMINDER: Run Define Search Criteria Option Really use ALL cases (this may take some time)? No// Using a Search Template will restrict cases. It will act as a filter using only those cases that fit the criteria you have selected. #################### #################### #################### #################### #################### #################### #################### #################### #################### #################### #################### #################### #################### #################### ####################