Index: smart/trunk/p/C0SDEM.m
===================================================================
--- smart/trunk/p/C0SDEM.m (revision 1569)
+++ smart/trunk/p/C0SDEM.m (revision 1571)
@@ -1,289 +1,289 @@
-C0SDEM ; GPL - Smart Demographics Processing ;2/22/12 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
- ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- Q
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ; Bob
- ; J
- ; Odenkirk
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ; 15 Main St
- ; Apt 2
- ; Wonderland
- ; OZ
- ; 54321
- ; USA
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ; 800-555-1212
- ;
- ;
- ;
- ;
- ;
- ;
- ; 800-555-1515
- ;
- ;
- ;
- ; male
- ; 1959-12-25
- ; bob.odenkirk@example.com
- ;
- ;
- ;
- ; My Hospital Record 2304575
- ; 2304575
- ; My Hospital Record
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ; Bob
- ; J
- ; Odenkirk
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ; 15 Main St
- ; Apt 2
- ; Wonderland
- ; OZ
- ; 54321
- ; USA
- ;
- ;
- ;
- ;
- ;
- ;
- ;
- ; 800-555-1212
- ;
- ;
- ;
- ;
- ;
- ;
- ; 800-555-1515
- ;
- ;
- ;
- ; male
- ; 1959-12-25
- ; bob.odenkirk@example.com
- ;
- ;
- ;
- ; My Hospital Record 2304575
- ; 2304575
- ; My Hospital Record
- ;
- ;
- ;
- ;
- ;
- ;G(1)="nodeID:25591^rdf:type^v:Home"
- ;G(2)="nodeID:25591^rdf:type^v:Pref"
- ;G(3)="nodeID:25591^rdf:type^v:Tel"
- ;G(4)="nodeID:25591^rdf:value^800-369-6403"
- ;G(5)="nodeID:25611^rdf:type^v:Name"
- ;G(6)="nodeID:25611^v:additional-name^N"
- ;G(7)="nodeID:25611^v:family-name^Brooks"
- ;G(8)="nodeID:25611^v:given-name^Brian"
- ;G(9)="nodeID:25622^dcterms:identifier^981968"
- ;G(10)="nodeID:25622^dcterms:title^My Hospital Record 981968"
- ;G(11)="nodeID:25622^rdf:type^sp:Code"
- ;G(12)="nodeID:25622^sp:system^My Hospital Record"
- ;G(13)="nodeID:25623^rdf:type^v:Address"
- ;G(14)="nodeID:25623^rdf:type^v:Home"
- ;G(15)="nodeID:25623^rdf:type^v:Pref"
- ;G(16)="nodeID:25623^v:locality^Bixby"
- ;G(17)="nodeID:25623^v:postal-code^74008"
- ;G(18)="nodeID:25623^v:region^OK"
- ;G(19)="nodeID:25623^v:street-address^82 Lake St"
- ;G(20)="smart:981968/demographics^foaf:gender^male"
- ;G(21)="smart:981968/demographics^rdf:type^sp:Demographics"
- ;G(22)="smart:981968/demographics^sp:belongsTo^smart:981968"
- ;G(23)="smart:981968/demographics^sp:medicalRecordNumber^nodeID:25622"
- ;G(24)="smart:981968/demographics^v:adr^nodeID:25623"
- ;G(25)="smart:981968/demographics^v:bday^1956-03-23"
- ;G(26)="smart:981968/demographics^v:email^brian.brooks@example.com"
- ;G(27)="smart:981968/demographics^v:n^nodeID:25611"
- ;G(28)="smart:981968/demographics^v:tel^nodeID:25591"
- Q
- ;
-PATIENT(GRTN,C0SARY) ; GRTN, passed by reference,
- ; is the return name of the graph created. "" if none
- ; C0SARY is passed in by reference and is the NHIN array of patient
- ;
- I $O(C0SARY("patient",""))="" D Q ;
- . I $D(DEBUG) W !,"No Patient array"
- . S GRTN=""
- S GRTN="" ; default to no patient
- N C0SGRF
- S C0SGRF="vistaSmart:"_ZPATID_"/patient"
- S ZPAT=C0SGRF ; subject is the same as the graph name
- I $D(DEBUG) W !,"Processing ",C0SGRF
- D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
- D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
- N FARY S FARY="C0XFARY"
- D USEFARY^C0XF2N(FARY)
- D VOCINIT^C0XUTIL
- ;
- N ZPN,ZR
- D STARTADD^C0XF2N
- ;
- ; First do the base demographic graph
- ;
- S ZPN=$NA(C0SARY("patient",1)) ; name of predicate array for this patient
- N SEX S SEX=$G(@ZPN@("gender@value"))
- I SEX="M" S SEX="male"
- I SEX="F" S SEX="female"
- S ZR("foaf:gender")=SEX
- S ZR("rdf:type")="sp:Demographics"
- S ZR("sp:belongsTo")=ZPAT
- N PATIENT
- S PATIENT=$P(ZPAT,"#",2)
- I $D(DEBUG) W !,"PROCESSING PATIENT ",PATIENT
- N NMREC S NMREC=$$ANONS^C0XF2N ; new anonomous subject for med rec graph
- S ZR("sp:medicalRecordNumber")=NMREC
- N NVADR S NVADR=$$ANONS^C0XF2N ; for address
- S ZR("v:adr")=NVADR
- N NNAME S NNAME=$$ANONS^C0XF2N ; for name
- S ZR("v:n")=NNAME
- N NTEL S NTEL=$$ANONS^C0XF2N ; for telephone
- I $D(@ZPN@("telecomList.telecom@value")) S ZR("v:tel")=NTEL ; only if exists
- N BDATE
- S ZX=""
- S ZX=$G(@ZPN@("dob@value")) ; date of birth in fileman format
- S BDATE=$$FMTE^XLFDT(ZX,"7D") ; ordered date
- S BDATE=$TR(BDATE,"/","-") ; change slashes to hyphens
- I BDATE="" S BDATE="UNKNOWN"
- N Z2,Z3
- S Z2=$P(BDATE,"-",2)
- S Z3=$P(BDATE,"-",3)
- I $L(Z2)=1 S $P(BDATE,"-",2)="0"_Z2
- I $L(Z3)=1 S $P(BDATE,"-",3)="0"_Z3
- S ZR("v:bday")=BDATE
- I $D(C0SVISTA) D ;
- . S ZR("vista:SSN")=$G(@ZPN@("ssn@value")) ; SSN
- . S ZR("vista:DFN")=$G(@ZPN@("id@value")) ; DFN
- D ADDINN^C0XF2N(C0SGRF,ZPAT,.ZR) ; create base graph
- K ZR
- ;
- ; create address sub-graph
- ;
- S ZR("rdf:type")="v:Address"
- S ZR("rdf:type")="v:Home"
- S ZR("v:locality")=$G(@ZPN@("address@city"))
- S ZR("v:postal-code")=$G(@ZPN@("address@postalCode"))
- S ZR("v:region")=$G(@ZPN@("address@stateProvince"))
- S ZR("v:street-address")=$G(@ZPN@("address@streetLine1"))
- D ADDINN^C0XF2N(C0SGRF,NVADR,.ZR) ; create the vcard address
- K ZR
- ;
- ; create medical record subgraph
- ;
- S ZR("dcterms:identifier")=$G(@ZPN@("id@value"))
- S ZR("dcterms:title")="VistA Patient Record "_ZR("dcterms:identifier")
- S ZR("rdf:type")="sp:Code"
- S ZR("sp:system")="VistA Patient Record"
- D ADDINN^C0XF2N(C0SGRF,NMREC,.ZR) ; create medical record graph
- K ZR
- ;
- ; create name subgraph
- ;
- N ZNF,ZNL,ZNM,ZNAM
- S ZR("rdf:type")="v:Name"
- S ZX=$G(@ZPN@("givenNames@value")) ; first name and middle names
- S ZNF=$P(ZX," ",1) ; first name is first piece
- S ZNM=$P(ZX," ",2) ; middle names are the rest
- S ZR("v:additional-name")=ZNM
- S ZR("v:family-name")=$G(@ZPN@("familyName@value"))
- S ZR("v:given-name")=ZNF
- D ADDINN^C0XF2N(C0SGRF,NNAME,.ZR) ; insert name graph
- K ZR
- ;
- ; create telephone subgraph
- ;
- D ;
- . S ZR("rdf:value")=$G(@ZPN@("telecomList.telecom@value"))
- . I ZR("rdf:value")="" Q ; telephone number missing, no subgraph
- . S ZR("rdf:type")="v:Tel"
- . D ADDINN^C0XF2N(C0SGRF,NTEL,.ZR)
- K ZR
- ;
- ; load the demographics graph and all sub graphs to the triple store
- ;
- D BULKLOAD^C0XF2N(.C0XFDA)
- S GRTN=C0SGRF
- Q
- ;
-AGES ; LIST ALL PATIENTS AND THEIR AGES
- N ZI S ZI=0
- F S ZI=$O(^DPT(ZI)) Q:+ZI=0 D ; FOR EVERY PATIENT
- . N ZDOB
- . S ZDOB=$$GET1^DIQ(2,ZI_",","DOB","I") ; FILEMAN DOB
- . N ZNAME
- . S ZNAME=$P(^DPT(ZI,0),U)
- . N ZSEX
- . S ZSEX=$$GET1^DIQ(2,ZI_",","SEX")
- . W !,"DFN:",ZI," ",ZNAME," AGE: ",+$$BRIEF^VWTIME(ZDOB)," YEAR OLD ",ZSEX
- Q
- ;
+C0SDEM ; GPL - Smart Demographics Processing ;2/22/12 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ Q
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ; Bob
+ ; J
+ ; Odenkirk
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ; 15 Main St
+ ; Apt 2
+ ; Wonderland
+ ; OZ
+ ; 54321
+ ; USA
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ; 800-555-1212
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ; 800-555-1515
+ ;
+ ;
+ ;
+ ; male
+ ; 1959-12-25
+ ; bob.odenkirk@example.com
+ ;
+ ;
+ ;
+ ; My Hospital Record 2304575
+ ; 2304575
+ ; My Hospital Record
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ; Bob
+ ; J
+ ; Odenkirk
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ; 15 Main St
+ ; Apt 2
+ ; Wonderland
+ ; OZ
+ ; 54321
+ ; USA
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ; 800-555-1212
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;
+ ; 800-555-1515
+ ;
+ ;
+ ;
+ ; male
+ ; 1959-12-25
+ ; bob.odenkirk@example.com
+ ;
+ ;
+ ;
+ ; My Hospital Record 2304575
+ ; 2304575
+ ; My Hospital Record
+ ;
+ ;
+ ;
+ ;
+ ;
+ ;G(1)="nodeID:25591^rdf:type^v:Home"
+ ;G(2)="nodeID:25591^rdf:type^v:Pref"
+ ;G(3)="nodeID:25591^rdf:type^v:Tel"
+ ;G(4)="nodeID:25591^rdf:value^800-369-6403"
+ ;G(5)="nodeID:25611^rdf:type^v:Name"
+ ;G(6)="nodeID:25611^v:additional-name^N"
+ ;G(7)="nodeID:25611^v:family-name^Brooks"
+ ;G(8)="nodeID:25611^v:given-name^Brian"
+ ;G(9)="nodeID:25622^dcterms:identifier^981968"
+ ;G(10)="nodeID:25622^dcterms:title^My Hospital Record 981968"
+ ;G(11)="nodeID:25622^rdf:type^sp:Code"
+ ;G(12)="nodeID:25622^sp:system^My Hospital Record"
+ ;G(13)="nodeID:25623^rdf:type^v:Address"
+ ;G(14)="nodeID:25623^rdf:type^v:Home"
+ ;G(15)="nodeID:25623^rdf:type^v:Pref"
+ ;G(16)="nodeID:25623^v:locality^Bixby"
+ ;G(17)="nodeID:25623^v:postal-code^74008"
+ ;G(18)="nodeID:25623^v:region^OK"
+ ;G(19)="nodeID:25623^v:street-address^82 Lake St"
+ ;G(20)="smart:981968/demographics^foaf:gender^male"
+ ;G(21)="smart:981968/demographics^rdf:type^sp:Demographics"
+ ;G(22)="smart:981968/demographics^sp:belongsTo^smart:981968"
+ ;G(23)="smart:981968/demographics^sp:medicalRecordNumber^nodeID:25622"
+ ;G(24)="smart:981968/demographics^v:adr^nodeID:25623"
+ ;G(25)="smart:981968/demographics^v:bday^1956-03-23"
+ ;G(26)="smart:981968/demographics^v:email^brian.brooks@example.com"
+ ;G(27)="smart:981968/demographics^v:n^nodeID:25611"
+ ;G(28)="smart:981968/demographics^v:tel^nodeID:25591"
+ Q
+ ;
+PATIENT(GRTN,C0SARY) ; GRTN, passed by reference,
+ ; is the return name of the graph created. "" if none
+ ; C0SARY is passed in by reference and is the NHIN array of patient
+ ;
+ I $O(C0SARY("patient",""))="" D Q ;
+ . I $D(DEBUG) W !,"No Patient array"
+ . S GRTN=""
+ S GRTN="" ; default to no patient
+ N C0SGRF
+ S C0SGRF="vistaSmart:"_ZPATID_"/patient"
+ S ZPAT=C0SGRF ; subject is the same as the graph name
+ I $D(DEBUG) W !,"Processing ",C0SGRF
+ D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
+ D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
+ N FARY S FARY="C0XFARY"
+ D USEFARY^C0XF2N(FARY)
+ D VOCINIT^C0XUTIL
+ ;
+ N ZPN,ZR
+ D STARTADD^C0XF2N
+ ;
+ ; First do the base demographic graph
+ ;
+ S ZPN=$NA(C0SARY("patient",1)) ; name of predicate array for this patient
+ N SEX S SEX=$G(@ZPN@("gender@value"))
+ I SEX="M" S SEX="male"
+ I SEX="F" S SEX="female"
+ S ZR("foaf:gender")=SEX
+ S ZR("rdf:type")="sp:Demographics"
+ S ZR("sp:belongsTo")=ZPAT
+ N PATIENT
+ S PATIENT=$P(ZPAT,"#",2)
+ I $D(DEBUG) W !,"PROCESSING PATIENT ",PATIENT
+ N NMREC S NMREC=$$ANONS^C0XF2N ; new anonomous subject for med rec graph
+ S ZR("sp:medicalRecordNumber")=NMREC
+ N NVADR S NVADR=$$ANONS^C0XF2N ; for address
+ S ZR("v:adr")=NVADR
+ N NNAME S NNAME=$$ANONS^C0XF2N ; for name
+ S ZR("v:n")=NNAME
+ N NTEL S NTEL=$$ANONS^C0XF2N ; for telephone
+ I $D(@ZPN@("telecomList.telecom@value")) S ZR("v:tel")=NTEL ; only if exists
+ N BDATE
+ S ZX=""
+ S ZX=$G(@ZPN@("dob@value")) ; date of birth in fileman format
+ S BDATE=$$FMTE^XLFDT(ZX,"7D") ; ordered date
+ S BDATE=$TR(BDATE,"/","-") ; change slashes to hyphens
+ I BDATE="" S BDATE="UNKNOWN"
+ N Z2,Z3
+ S Z2=$P(BDATE,"-",2)
+ S Z3=$P(BDATE,"-",3)
+ I $L(Z2)=1 S $P(BDATE,"-",2)="0"_Z2
+ I $L(Z3)=1 S $P(BDATE,"-",3)="0"_Z3
+ S ZR("v:bday")=BDATE
+ I $D(C0SVISTA) D ;
+ . S ZR("vista:SSN")=$G(@ZPN@("ssn@value")) ; SSN
+ . S ZR("vista:DFN")=$G(@ZPN@("id@value")) ; DFN
+ D ADDINN^C0XF2N(C0SGRF,ZPAT,.ZR) ; create base graph
+ K ZR
+ ;
+ ; create address sub-graph
+ ;
+ S ZR("rdf:type")="v:Address"
+ S ZR("rdf:type")="v:Home"
+ S ZR("v:locality")=$G(@ZPN@("address@city"))
+ S ZR("v:postal-code")=$G(@ZPN@("address@postalCode"))
+ S ZR("v:region")=$G(@ZPN@("address@stateProvince"))
+ S ZR("v:street-address")=$G(@ZPN@("address@streetLine1"))
+ D ADDINN^C0XF2N(C0SGRF,NVADR,.ZR) ; create the vcard address
+ K ZR
+ ;
+ ; create medical record subgraph
+ ;
+ S ZR("dcterms:identifier")=$G(@ZPN@("id@value"))
+ S ZR("dcterms:title")="VistA Patient Record "_ZR("dcterms:identifier")
+ S ZR("rdf:type")="sp:Code"
+ S ZR("sp:system")="VistA Patient Record"
+ D ADDINN^C0XF2N(C0SGRF,NMREC,.ZR) ; create medical record graph
+ K ZR
+ ;
+ ; create name subgraph
+ ;
+ N ZNF,ZNL,ZNM,ZNAM
+ S ZR("rdf:type")="v:Name"
+ S ZX=$G(@ZPN@("givenNames@value")) ; first name and middle names
+ S ZNF=$P(ZX," ",1) ; first name is first piece
+ S ZNM=$P(ZX," ",2) ; middle names are the rest
+ S ZR("v:additional-name")=ZNM
+ S ZR("v:family-name")=$G(@ZPN@("familyName@value"))
+ S ZR("v:given-name")=ZNF
+ D ADDINN^C0XF2N(C0SGRF,NNAME,.ZR) ; insert name graph
+ K ZR
+ ;
+ ; create telephone subgraph
+ ;
+ D ;
+ . S ZR("rdf:value")=$G(@ZPN@("telecomList.telecom@value"))
+ . I ZR("rdf:value")="" Q ; telephone number missing, no subgraph
+ . S ZR("rdf:type")="v:Tel"
+ . D ADDINN^C0XF2N(C0SGRF,NTEL,.ZR)
+ K ZR
+ ;
+ ; load the demographics graph and all sub graphs to the triple store
+ ;
+ D BULKLOAD^C0XF2N(.C0XFDA)
+ S GRTN=C0SGRF
+ Q
+ ;
+AGES ; LIST ALL PATIENTS AND THEIR AGES
+ N ZI S ZI=0
+ F S ZI=$O(^DPT(ZI)) Q:+ZI=0 D ; FOR EVERY PATIENT
+ . N ZDOB
+ . S ZDOB=$$GET1^DIQ(2,ZI_",","DOB","I") ; FILEMAN DOB
+ . N ZNAME
+ . S ZNAME=$P(^DPT(ZI,0),U)
+ . N ZSEX
+ . S ZSEX=$$GET1^DIQ(2,ZI_",","SEX")
+ . W !,"DFN:",ZI," ",ZNAME," AGE: ",+$$BRIEF^VWTIME(ZDOB)," YEAR OLD ",ZSEX
+ Q
+ ;
Index: smart/trunk/p/C0SDOM.m
===================================================================
--- smart/trunk/p/C0SDOM.m (revision 1569)
+++ smart/trunk/p/C0SDOM.m (revision 1571)
@@ -1,320 +1,320 @@
-C0SDOM ; GPL - Smart Container - DOM PROCESSING ROUTINES ;6/6/11 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
- ;Copyright 2011,2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
-
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- Q
- ;
-DOMO(ZOID,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; RECURSIVE ROUTINE TO POPULATE
- ; THE XPATH INDEX ZXIDX, PASSED BY NAME
- ; THE XPATH ARRAY XPARY, PASSED BY NAME
- ; ZOID IS THE STARTING OID
- ; ZPATH IS THE STARTING XPATH, USUALLY "/"
- ; ZNUM IS THE MULTIPLE NUMBER [x], USUALLY NULL WHEN ON THE TOP NODE
- ; ZREDUX IS THE XPATH REDUCTION STRING, TAKEN OUT OF EACH XPATH IF PRESENT
- I $G(ZREDUX)="" S ZREDUX=""
- N NEWPATH,NARY ; NEWPATH IS AN XPATH NARY IS AN NHIN MUMPS ARRAY
- N NEWNUM S NEWNUM=""
- I $G(ZNUM)>0 S NEWNUM="["_ZNUM_"]"
- S NEWPATH=ZPATH_"/"_$$TAG(ZOID)_NEWNUM ; CREATE THE XPATH FOR THIS NODE
- I $G(ZREDUX)'="" D ; REDUX PROVIDED?
- . N GT S GT=$P(NEWPATH,ZREDUX,2)
- . I GT'="" S NEWPATH=GT
- S @ZXIDX@(NEWPATH)=ZOID ; ADD THE XPATH FOR THIS NODE TO THE XPATH INDEX
- N GA D ATT("GA",ZOID) ; GET ATTRIBUTES FOR THIS NODE
- I $D(GA) D ; PROCESS THE ATTRIBUTES
- . N ZI S ZI=""
- . F S ZI=$O(GA(ZI)) Q:ZI="" D ; FOR EACH ATTRIBUTE
- . . N ZP S ZP=NEWPATH_"@"_ZI ; PATH FOR ATTRIBUTE
- . . S @ZXPARY@(ZP)=GA(ZI) ; ADD THE ATTRIBUTE XPATH TO THE XP ARRAY
- . . I GA(ZI)'="" D ADDNARY(ZP,GA(ZI)) ; ADD THE NHIN ARRAY VALUE
- N GD D DATA("GD",ZOID) ; SEE IF THERE IS DATA FOR THIS NODE
- I $D(GD(2)) D ;
- . M @ZXPARY@(NEWPATH)=GD ; IF MULITPLE DATA MERGE TO THE ARRAY
- E I $D(GD(1)) D ;
- . S @ZXPARY@(NEWPATH)=GD(1) ; IF SINGLE VALUE, ADD TO ARRAY
- . I GD(1)'="" D ADDNARY(NEWPATH,GD(1)) ; ADD TO NHIN ARRAY
- N ZFRST S ZFRST=$$FIRST(ZOID) ; SET FIRST CHILD
- I ZFRST'=0 D ; THERE IS A CHILD
- . N ZNUM
- . N ZMULT S ZMULT=$$ISMULT(ZFRST) ; IS FIRST CHILD A MULTIPLE
- . D DOMO(ZFRST,NEWPATH,ZNARY,ZXIDX,ZXPARY,$S(ZMULT:1,1:""),ZREDUX) ; THE CHILD
- N GNXT S GNXT=$$NXTSIB(ZOID)
- I $$TAG(GNXT)'=$$TAG(ZOID) S ZNUM="" ; RESET COUNTING AFTER MULTIPLES
- I GNXT'=0 D ;
- . N ZMULT S ZMULT=$$ISMULT(GNXT) ; IS THE SIBLING A MULTIPLE?
- . I (ZNUM="")&(ZMULT) D ; SIBLING IS FIRST OF MULTIPLES
- . . N ZNUM S ZNUM=1 ;
- . . D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; DO NEXT SIB
- . E D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,$S(ZNUM>0:ZNUM+1,1:""),ZREDUX) ; SIB
- Q
- ;
-ADDNARY(ZXP,ZVALUE) ; ADD AN NHIN ARRAY VALUE TO ZNARY
- ;
- ; IF ZATT=1 THE ARRAY IS ADDED AS ATTRIBUTES
- ;
- N ZZI,ZZJ,ZZN
- S ZZI=$P(ZXP,"/",1) ; FIRST PIECE OF XPATH ARRAY
- I ZZI="" Q ; DON'T ADD THIS ONE .. PROBABLY THE //results NODE
- S ZZJ=$P(ZXP,ZZI_"/",2) ; REST OF XPATH ARRAY
- S ZZJ=$TR(ZZJ,"/",".") ; REPLACE / WITH .
- I ZZI'["]" D ; A SINGLETON
- . S ZZN=1
- E D ; THERE IS AN [x] OCCURANCE
- . S ZZN=$P($P(ZZI,"[",2),"]",1) ; PULL OUT THE OCCURANCE
- . S ZZI=$P(ZZI,"[",1) ; TAKE OUT THE [X]
- I ZZJ'="" D ; TIME TO ADD THE VALUE
- . S @ZNARY@(ZZI,ZZN,ZZJ)=ZVALUE
- Q
- ;
-PARSE(INXML,INDOC) ;CALL THE MXML PARSER ON INXML, PASSED BY NAME
- ; INDOC IS PASSED AS THE DOCUMENT NAME - DON'T KNOW WHERE TO STORE THIS NOW
- ; EXTRINSIC WHICH RETURNS THE DOCID ASSIGNED BY MXML
- ;Q $$EN^MXMLDOM(INXML)
- Q $$EN^MXMLDOM(INXML,"W")
- ;
-ISMULT(ZOID) ; RETURN TRUE IF ZOID IS ONE OF A MULTIPLE
- N ZN
- ;I $$TAG(ZOID)["entry" B
- S ZN=$$NXTSIB(ZOID)
- I ZN'="" Q $$TAG(ZOID)=$$TAG(ZN) ; IF TAG IS THE SAME AS NEXT SIB TAG
- Q 0
- ;
-FIRST(ZOID) ;RETURNS THE OID OF THE FIRST CHILD OF ZOID
- Q $$CHILD^MXMLDOM(C0SDOCID,ZOID)
- ;
-PARENT(ZOID) ;RETURNS THE OID OF THE PARENT OF ZOID
- Q $$PARENT^MXMLDOM(C0SDOCID,ZOID)
- ;
-ATT(RTN,NODE) ;GET ATTRIBUTES FOR ZOID
- S HANDLE=C0SDOCID
- K @RTN
- D GETTXT^MXMLDOM("A")
- Q
- ;
-TAG(ZOID) ; RETURNS THE XML TAG FOR THE NODE
- ;I ZOID=149 B ;GPLTEST
- N X,Y
- S Y=""
- S X=$G(C0SCBK("TAG")) ;IS THERE A CALLBACK FOR THIS ROUTINE
- I X'="" X X ; EXECUTE THE CALLBACK, SHOULD SET Y
- I Y="" S Y=$$NAME^MXMLDOM(C0SDOCID,ZOID)
- Q Y
- ;
-NXTSIB(ZOID) ; RETURNS THE NEXT SIBLING
- Q $$SIBLING^MXMLDOM(C0SDOCID,ZOID)
- ;
-DATA(ZT,ZOID) ; RETURNS DATA FOR THE NODE
- ;N ZT,ZN S ZT=""
- ;S C0SDOM=$NA(^TMP("MXMLDOM",$J,C0SDOCID))
- ;Q $G(@C0SDOM@(ZOID,"T",1))
- S ZN=$$TEXT^MXMLDOM(C0SDOCID,ZOID,ZT)
- Q
- ;
-OUTXML(ZRTN,INID,NO1ST) ; USES C0SMXMLB (MXMLBLD) TO OUTPUT XML FROM AN MXMLDOM
- ;
- S C0SDOCID=INID
- I '$D(NO1ST) S NO1ST=0 ; DO NOT SURPRESS THE 0 S ZPARNODE=PARENT ; WE HAVE BEEN PASSED A PARENT NODE ID
- E I $L($G(PARENT))>0 D ; TBD FIND THE PARENT IN THE DOM AND SET LEVEL
- . D STARTELE^MXMLDOM(PARENT) ; INSERT THE PARENT NODE
- . S ZPARNODE=1 ;
- ; WE NOW HAVE A HANDLE AND A PARENT NODE AND LEVEL HAS BEEN SET
- N ZEXARY
- D EXPAND("ZEXARY",INARY) ; EXPAND THE NHIN ARRAY
- D MAJOR("ZEXARY") ; PROCESS ALL THE NODES TO BE ADDED
- I $L($G(PARENT))>0 D ENDELE^MXMLDOM(PARENT) ; CLOSE OUT THE PARENT NODE
- Q HANDLE ; SUCCESS
- ;
-MAJOR(ZARY) ; RECURSIVE ROUTINE FOR INTERMEDIATE NODES
- N ZI S ZI=""
- N ZTAG
- F S ZI=$O(@ZARY@(ZI)) Q:ZI="" D ; FOR EACH SECTION
- . N ZELEADD S ZELEADD=0
- . I ZI["@" D ; END NODE HAS NO VALUE, ONLY ATTRIBUTES
- . . S ZTAG=$P(ZI,"@",1) ; PULL OUT THE TAG
- . . K ZATT ; CLEAR OUT LAST ONE
- . . M ZATT=@ZARY@(ZI,1) ; GET ATTRIBUTE ARRAY
- . . D STARTELE^MXMLDOM(ZTAG,.ZATT) ; ADD THE NODE
- . . S ZELEADD=1 ; FLAG TO NOT ADD THE ELEMENT TWICE
- . I $O(@ZARY@(ZI,""))="" D ;END NODE
- . . S ZTAG=ZI ; USE ZI FOR THE TAG
- . . I 'ZELEADD D STARTELE^MXMLDOM(ZTAG) ; ADD ELEMENT IF NOT THERE
- . . S ZELEADD=1 ; ADDED AN ELEMENT
- . . D CHAR^MXMLDOM($G(@ZARY@(ZI))) ; INSERT THE VALUE
- . I ZELEADD D Q ; NO MORE TO DO ON THIS LEVEL
- . . D ENDELE^MXMLDOM(ZTAG) ; CLOSE THE ELEMENT BEFORE LEAVING
- . N NEWARY ; INDENTED ARRAY
- . N ZN S ZN=0
- . F S ZN=$O(@ZARY@(ZI,ZN)) Q:ZN="" D ; FOR EACH MULTIPLE
- . . D STARTELE^MXMLDOM(ZI) ; ADD THE INTERMEDIATE TAG
- . . S NEWARY=$NA(@ZARY@(ZI,ZN)) ; INDENT THE ARRAY
- . . D MAJOR(NEWARY) ; RECURSE FOR INDENTED ARRAY
- . . D ENDELE^MXMLDOM(ZI) ; END THE INTERMEDIATE TAG
- Q
- ;
-EXPAND(ZZOUT,ZZIN) ; EXPANDS NHIN ARRAY FORMAT TO AN EXPANDED
- ; CONSISTENT FORMAT
- ; GNARY("patient",1,"facilities[2].facility@code")="050"
- ; becomes G2ARY("patient",1,"facilities",2,"facility@",1,"code")="050"
- ; for easier processing (this is fileman format genius)
- ; basically removes the dot notation from the strings
- ;
- N ZZI
- S ZZI=""
- F S ZZI=$O(@ZZIN@(ZZI)) Q:ZZI="" D ;
- . N ZZN S ZZN=0
- . F S ZZN=$O(@ZZIN@(ZZI,ZZN)) Q:ZZN="" D ;
- . . N ZZS S ZZS=""
- . . N GA ;PUSH STACK
- . . F S ZZS=$O(@ZZIN@(ZZI,ZZN,ZZS)) Q:ZZS="" D ;
- . . . K GA ; NEW STACK
- . . . D PUSH^C0SXPATH("GA",ZZI_"^"_ZZN) ; PUSH PARENT
- . . . N ZZV ; PLACE TO STASH THE VALUE
- . . . S ZZV=@ZZIN@(ZZI,ZZN,ZZS) ; VALUE
- . . . W !,"VALUE:",ZZV
- . . . N GK ; COUNTER
- . . . F GK=1:1:$L(ZZS,".") D ; FOR EACH INTERMEDIATE NODE
- . . . . N ZZN2 S ZZN2=1 ; DEFAULT IF NO [X]
- . . . . N GM S GM=$P(ZZS,".",GK) ; TAG
- . . . . I GM["[" D ; IT'S A MULTIPLE
- . . . . . S ZZN2=$P($P(GM,"[",2),"]",1) ; PULL OUT THE NUMBER
- . . . . . S GM=$P(GM,"[",1) ; PULL OUT THE TAG
- . . . . I GM["@" D ; IT'S GOT ATTRIBUTES
- . . . . . N GM2 S GM2=$P(GM,"@",2) ; PULLOUT THE ATTRIBUTE NAME
- . . . . . D PUSH^C0SXPATH("GA",$P(GM,"@",1)_"@"_"^"_ZZN2) ; PUSH THE TAG
- . . . . . D PUSH^C0SXPATH("GA",GM2_"^"_ZZN2)
- . . . . E D PUSH^C0SXPATH("GA",GM_"^"_ZZN2) ;
- . . . S GA(GA(0))=$P(GA(GA(0)),"^",1)_"^" ; GET RID OF THE LAST "1"
- . . . N GZI S GZI="" ; STRING FOR THE INDEX
- . . . F GK=1:1:GA(0) D ; TIME TO REVERSE POP THE TAGS
- . . . . S GM=$P(GA(GK),"^",1) ; THE TAG
- . . . . S ZZN2=$P(GA(GK),"^",2) ; THE NUMBER IF ANY
- . . . . I ZZN2="" S GZI=GZI_""""_GM_"""" ; FOR THE LAST ONE
- . . . . E S GZI=GZI_""""_GM_""""_","_ZZN2_"," ; FOR THE REST
- . . . S GZI2=ZZOUT_"("_GZI_")" ; INCLUDE THE ARRAY NAME
- . . . W !,GZI
- . . . S @GZI2=ZZV ; REMEMBER THE VALUE?
- Q
- ;
-NEWDOM() ; extrinsic which creates a new DOM and returns the HANDLE
- N CBK,SUCCESS,LEVEL,NODE,HANDLE
- K ^TMP("MXMLERR",$J)
- L +^TMP("MXMLDOM",$J):5
- E Q 0
- S HANDLE=$O(^TMP("MXMLDOM",$J,""),-1)+1,^(HANDLE)=""
- L -^TMP("MXMLDOM",$J)
- Q HANDLE
- ;
+C0SDOM ; GPL - Smart Container - DOM PROCESSING ROUTINES ;6/6/11 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2011,2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ Q
+ ;
+DOMO(ZOID,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; RECURSIVE ROUTINE TO POPULATE
+ ; THE XPATH INDEX ZXIDX, PASSED BY NAME
+ ; THE XPATH ARRAY XPARY, PASSED BY NAME
+ ; ZOID IS THE STARTING OID
+ ; ZPATH IS THE STARTING XPATH, USUALLY "/"
+ ; ZNUM IS THE MULTIPLE NUMBER [x], USUALLY NULL WHEN ON THE TOP NODE
+ ; ZREDUX IS THE XPATH REDUCTION STRING, TAKEN OUT OF EACH XPATH IF PRESENT
+ I $G(ZREDUX)="" S ZREDUX=""
+ N NEWPATH,NARY ; NEWPATH IS AN XPATH NARY IS AN NHIN MUMPS ARRAY
+ N NEWNUM S NEWNUM=""
+ I $G(ZNUM)>0 S NEWNUM="["_ZNUM_"]"
+ S NEWPATH=ZPATH_"/"_$$TAG(ZOID)_NEWNUM ; CREATE THE XPATH FOR THIS NODE
+ I $G(ZREDUX)'="" D ; REDUX PROVIDED?
+ . N GT S GT=$P(NEWPATH,ZREDUX,2)
+ . I GT'="" S NEWPATH=GT
+ S @ZXIDX@(NEWPATH)=ZOID ; ADD THE XPATH FOR THIS NODE TO THE XPATH INDEX
+ N GA D ATT("GA",ZOID) ; GET ATTRIBUTES FOR THIS NODE
+ I $D(GA) D ; PROCESS THE ATTRIBUTES
+ . N ZI S ZI=""
+ . F S ZI=$O(GA(ZI)) Q:ZI="" D ; FOR EACH ATTRIBUTE
+ . . N ZP S ZP=NEWPATH_"@"_ZI ; PATH FOR ATTRIBUTE
+ . . S @ZXPARY@(ZP)=GA(ZI) ; ADD THE ATTRIBUTE XPATH TO THE XP ARRAY
+ . . I GA(ZI)'="" D ADDNARY(ZP,GA(ZI)) ; ADD THE NHIN ARRAY VALUE
+ N GD D DATA("GD",ZOID) ; SEE IF THERE IS DATA FOR THIS NODE
+ I $D(GD(2)) D ;
+ . M @ZXPARY@(NEWPATH)=GD ; IF MULITPLE DATA MERGE TO THE ARRAY
+ E I $D(GD(1)) D ;
+ . S @ZXPARY@(NEWPATH)=GD(1) ; IF SINGLE VALUE, ADD TO ARRAY
+ . I GD(1)'="" D ADDNARY(NEWPATH,GD(1)) ; ADD TO NHIN ARRAY
+ N ZFRST S ZFRST=$$FIRST(ZOID) ; SET FIRST CHILD
+ I ZFRST'=0 D ; THERE IS A CHILD
+ . N ZNUM
+ . N ZMULT S ZMULT=$$ISMULT(ZFRST) ; IS FIRST CHILD A MULTIPLE
+ . D DOMO(ZFRST,NEWPATH,ZNARY,ZXIDX,ZXPARY,$S(ZMULT:1,1:""),ZREDUX) ; THE CHILD
+ N GNXT S GNXT=$$NXTSIB(ZOID)
+ I $$TAG(GNXT)'=$$TAG(ZOID) S ZNUM="" ; RESET COUNTING AFTER MULTIPLES
+ I GNXT'=0 D ;
+ . N ZMULT S ZMULT=$$ISMULT(GNXT) ; IS THE SIBLING A MULTIPLE?
+ . I (ZNUM="")&(ZMULT) D ; SIBLING IS FIRST OF MULTIPLES
+ . . N ZNUM S ZNUM=1 ;
+ . . D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; DO NEXT SIB
+ . E D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,$S(ZNUM>0:ZNUM+1,1:""),ZREDUX) ; SIB
+ Q
+ ;
+ADDNARY(ZXP,ZVALUE) ; ADD AN NHIN ARRAY VALUE TO ZNARY
+ ;
+ ; IF ZATT=1 THE ARRAY IS ADDED AS ATTRIBUTES
+ ;
+ N ZZI,ZZJ,ZZN
+ S ZZI=$P(ZXP,"/",1) ; FIRST PIECE OF XPATH ARRAY
+ I ZZI="" Q ; DON'T ADD THIS ONE .. PROBABLY THE //results NODE
+ S ZZJ=$P(ZXP,ZZI_"/",2) ; REST OF XPATH ARRAY
+ S ZZJ=$TR(ZZJ,"/",".") ; REPLACE / WITH .
+ I ZZI'["]" D ; A SINGLETON
+ . S ZZN=1
+ E D ; THERE IS AN [x] OCCURANCE
+ . S ZZN=$P($P(ZZI,"[",2),"]",1) ; PULL OUT THE OCCURANCE
+ . S ZZI=$P(ZZI,"[",1) ; TAKE OUT THE [X]
+ I ZZJ'="" D ; TIME TO ADD THE VALUE
+ . S @ZNARY@(ZZI,ZZN,ZZJ)=ZVALUE
+ Q
+ ;
+PARSE(INXML,INDOC) ;CALL THE MXML PARSER ON INXML, PASSED BY NAME
+ ; INDOC IS PASSED AS THE DOCUMENT NAME - DON'T KNOW WHERE TO STORE THIS NOW
+ ; EXTRINSIC WHICH RETURNS THE DOCID ASSIGNED BY MXML
+ ;Q $$EN^MXMLDOM(INXML)
+ Q $$EN^MXMLDOM(INXML,"W")
+ ;
+ISMULT(ZOID) ; RETURN TRUE IF ZOID IS ONE OF A MULTIPLE
+ N ZN
+ ;I $$TAG(ZOID)["entry" B
+ S ZN=$$NXTSIB(ZOID)
+ I ZN'="" Q $$TAG(ZOID)=$$TAG(ZN) ; IF TAG IS THE SAME AS NEXT SIB TAG
+ Q 0
+ ;
+FIRST(ZOID) ;RETURNS THE OID OF THE FIRST CHILD OF ZOID
+ Q $$CHILD^MXMLDOM(C0SDOCID,ZOID)
+ ;
+PARENT(ZOID) ;RETURNS THE OID OF THE PARENT OF ZOID
+ Q $$PARENT^MXMLDOM(C0SDOCID,ZOID)
+ ;
+ATT(RTN,NODE) ;GET ATTRIBUTES FOR ZOID
+ S HANDLE=C0SDOCID
+ K @RTN
+ D GETTXT^MXMLDOM("A")
+ Q
+ ;
+TAG(ZOID) ; RETURNS THE XML TAG FOR THE NODE
+ ;I ZOID=149 B ;GPLTEST
+ N X,Y
+ S Y=""
+ S X=$G(C0SCBK("TAG")) ;IS THERE A CALLBACK FOR THIS ROUTINE
+ I X'="" X X ; EXECUTE THE CALLBACK, SHOULD SET Y
+ I Y="" S Y=$$NAME^MXMLDOM(C0SDOCID,ZOID)
+ Q Y
+ ;
+NXTSIB(ZOID) ; RETURNS THE NEXT SIBLING
+ Q $$SIBLING^MXMLDOM(C0SDOCID,ZOID)
+ ;
+DATA(ZT,ZOID) ; RETURNS DATA FOR THE NODE
+ ;N ZT,ZN S ZT=""
+ ;S C0SDOM=$NA(^TMP("MXMLDOM",$J,C0SDOCID))
+ ;Q $G(@C0SDOM@(ZOID,"T",1))
+ S ZN=$$TEXT^MXMLDOM(C0SDOCID,ZOID,ZT)
+ Q
+ ;
+OUTXML(ZRTN,INID,NO1ST) ; USES C0SMXMLB (MXMLBLD) TO OUTPUT XML FROM AN MXMLDOM
+ ;
+ S C0SDOCID=INID
+ I '$D(NO1ST) S NO1ST=0 ; DO NOT SURPRESS THE 0 S ZPARNODE=PARENT ; WE HAVE BEEN PASSED A PARENT NODE ID
+ E I $L($G(PARENT))>0 D ; TBD FIND THE PARENT IN THE DOM AND SET LEVEL
+ . D STARTELE^MXMLDOM(PARENT) ; INSERT THE PARENT NODE
+ . S ZPARNODE=1 ;
+ ; WE NOW HAVE A HANDLE AND A PARENT NODE AND LEVEL HAS BEEN SET
+ N ZEXARY
+ D EXPAND("ZEXARY",INARY) ; EXPAND THE NHIN ARRAY
+ D MAJOR("ZEXARY") ; PROCESS ALL THE NODES TO BE ADDED
+ I $L($G(PARENT))>0 D ENDELE^MXMLDOM(PARENT) ; CLOSE OUT THE PARENT NODE
+ Q HANDLE ; SUCCESS
+ ;
+MAJOR(ZARY) ; RECURSIVE ROUTINE FOR INTERMEDIATE NODES
+ N ZI S ZI=""
+ N ZTAG
+ F S ZI=$O(@ZARY@(ZI)) Q:ZI="" D ; FOR EACH SECTION
+ . N ZELEADD S ZELEADD=0
+ . I ZI["@" D ; END NODE HAS NO VALUE, ONLY ATTRIBUTES
+ . . S ZTAG=$P(ZI,"@",1) ; PULL OUT THE TAG
+ . . K ZATT ; CLEAR OUT LAST ONE
+ . . M ZATT=@ZARY@(ZI,1) ; GET ATTRIBUTE ARRAY
+ . . D STARTELE^MXMLDOM(ZTAG,.ZATT) ; ADD THE NODE
+ . . S ZELEADD=1 ; FLAG TO NOT ADD THE ELEMENT TWICE
+ . I $O(@ZARY@(ZI,""))="" D ;END NODE
+ . . S ZTAG=ZI ; USE ZI FOR THE TAG
+ . . I 'ZELEADD D STARTELE^MXMLDOM(ZTAG) ; ADD ELEMENT IF NOT THERE
+ . . S ZELEADD=1 ; ADDED AN ELEMENT
+ . . D CHAR^MXMLDOM($G(@ZARY@(ZI))) ; INSERT THE VALUE
+ . I ZELEADD D Q ; NO MORE TO DO ON THIS LEVEL
+ . . D ENDELE^MXMLDOM(ZTAG) ; CLOSE THE ELEMENT BEFORE LEAVING
+ . N NEWARY ; INDENTED ARRAY
+ . N ZN S ZN=0
+ . F S ZN=$O(@ZARY@(ZI,ZN)) Q:ZN="" D ; FOR EACH MULTIPLE
+ . . D STARTELE^MXMLDOM(ZI) ; ADD THE INTERMEDIATE TAG
+ . . S NEWARY=$NA(@ZARY@(ZI,ZN)) ; INDENT THE ARRAY
+ . . D MAJOR(NEWARY) ; RECURSE FOR INDENTED ARRAY
+ . . D ENDELE^MXMLDOM(ZI) ; END THE INTERMEDIATE TAG
+ Q
+ ;
+EXPAND(ZZOUT,ZZIN) ; EXPANDS NHIN ARRAY FORMAT TO AN EXPANDED
+ ; CONSISTENT FORMAT
+ ; GNARY("patient",1,"facilities[2].facility@code")="050"
+ ; becomes G2ARY("patient",1,"facilities",2,"facility@",1,"code")="050"
+ ; for easier processing (this is fileman format genius)
+ ; basically removes the dot notation from the strings
+ ;
+ N ZZI
+ S ZZI=""
+ F S ZZI=$O(@ZZIN@(ZZI)) Q:ZZI="" D ;
+ . N ZZN S ZZN=0
+ . F S ZZN=$O(@ZZIN@(ZZI,ZZN)) Q:ZZN="" D ;
+ . . N ZZS S ZZS=""
+ . . N GA ;PUSH STACK
+ . . F S ZZS=$O(@ZZIN@(ZZI,ZZN,ZZS)) Q:ZZS="" D ;
+ . . . K GA ; NEW STACK
+ . . . D PUSH^C0SXPATH("GA",ZZI_"^"_ZZN) ; PUSH PARENT
+ . . . N ZZV ; PLACE TO STASH THE VALUE
+ . . . S ZZV=@ZZIN@(ZZI,ZZN,ZZS) ; VALUE
+ . . . W !,"VALUE:",ZZV
+ . . . N GK ; COUNTER
+ . . . F GK=1:1:$L(ZZS,".") D ; FOR EACH INTERMEDIATE NODE
+ . . . . N ZZN2 S ZZN2=1 ; DEFAULT IF NO [X]
+ . . . . N GM S GM=$P(ZZS,".",GK) ; TAG
+ . . . . I GM["[" D ; IT'S A MULTIPLE
+ . . . . . S ZZN2=$P($P(GM,"[",2),"]",1) ; PULL OUT THE NUMBER
+ . . . . . S GM=$P(GM,"[",1) ; PULL OUT THE TAG
+ . . . . I GM["@" D ; IT'S GOT ATTRIBUTES
+ . . . . . N GM2 S GM2=$P(GM,"@",2) ; PULLOUT THE ATTRIBUTE NAME
+ . . . . . D PUSH^C0SXPATH("GA",$P(GM,"@",1)_"@"_"^"_ZZN2) ; PUSH THE TAG
+ . . . . . D PUSH^C0SXPATH("GA",GM2_"^"_ZZN2)
+ . . . . E D PUSH^C0SXPATH("GA",GM_"^"_ZZN2) ;
+ . . . S GA(GA(0))=$P(GA(GA(0)),"^",1)_"^" ; GET RID OF THE LAST "1"
+ . . . N GZI S GZI="" ; STRING FOR THE INDEX
+ . . . F GK=1:1:GA(0) D ; TIME TO REVERSE POP THE TAGS
+ . . . . S GM=$P(GA(GK),"^",1) ; THE TAG
+ . . . . S ZZN2=$P(GA(GK),"^",2) ; THE NUMBER IF ANY
+ . . . . I ZZN2="" S GZI=GZI_""""_GM_"""" ; FOR THE LAST ONE
+ . . . . E S GZI=GZI_""""_GM_""""_","_ZZN2_"," ; FOR THE REST
+ . . . S GZI2=ZZOUT_"("_GZI_")" ; INCLUDE THE ARRAY NAME
+ . . . W !,GZI
+ . . . S @GZI2=ZZV ; REMEMBER THE VALUE?
+ Q
+ ;
+NEWDOM() ; extrinsic which creates a new DOM and returns the HANDLE
+ N CBK,SUCCESS,LEVEL,NODE,HANDLE
+ K ^TMP("MXMLERR",$J)
+ L +^TMP("MXMLDOM",$J):5
+ E Q 0
+ S HANDLE=$O(^TMP("MXMLDOM",$J,""),-1)+1,^(HANDLE)=""
+ L -^TMP("MXMLDOM",$J)
+ Q HANDLE
+ ;
Index: smart/trunk/p/C0SLAB.m
===================================================================
--- smart/trunk/p/C0SLAB.m (revision 1569)
+++ smart/trunk/p/C0SLAB.m (revision 1571)
@@ -1,275 +1,275 @@
-C0SLAB ; GPL - Smart Lab Processing ;4/15/12 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
- ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- Q
- ;
- ; sample VistA NHIN lab result
- ;
- ;^TMP("C0STBL",32,"lab",8,"collected@value")=3110626.16
- ;^TMP("C0STBL",32,"lab",8,"comment")="Report Released Date/Time: Jun 26, 2011@19:00"
- ;^TMP("C0STBL",32,"lab",8,"comment@xml:space")="preserve"
- ;^TMP("C0STBL",32,"lab",8,"facility@code")=100
- ;^TMP("C0STBL",32,"lab",8,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",32,"lab",8,"groupName@value")="CH 0626 47"
- ;^TMP("C0STBL",32,"lab",8,"high@value")=" 101"
- ;^TMP("C0STBL",32,"lab",8,"id@value")="CH;6889372.84;67003"
- ;^TMP("C0STBL",32,"lab",8,"interpretation@value")="H"
- ;^TMP("C0STBL",32,"lab",8,"labOrderID@value")=336
- ;^TMP("C0STBL",32,"lab",8,"localName@value")="FBLDGLU"
- ;^TMP("C0STBL",32,"lab",8,"loinc@value")="14771-0"
- ;^TMP("C0STBL",32,"lab",8,"low@value")="69 "
- ;^TMP("C0STBL",32,"lab",8,"orderID@value")=807
- ;^TMP("C0STBL",32,"lab",8,"result@value")=178
- ;^TMP("C0STBL",32,"lab",8,"resulted@value")=3110626.190006
- ;^TMP("C0STBL",32,"lab",8,"sample@value")="SERUM"
- ;^TMP("C0STBL",32,"lab",8,"specimen@code")="0X500"
- ;^TMP("C0STBL",32,"lab",8,"specimen@name")="SERUM"
- ;^TMP("C0STBL",32,"lab",8,"status@value")="completed"
- ;^TMP("C0STBL",32,"lab",8,"test@value")="FASTING BLOOD GLUCOSE"
- ;^TMP("C0STBL",32,"lab",8,"type@value")="CH"
- ;^TMP("C0STBL",32,"lab",8,"units@value")="MG/DL"
- ;^TMP("C0STBL",32,"lab",8,"vuid@value")=4656342
- ;
- ; sample Smart lab result triples
- ;
- ;G("loinc:29571-7","dcterms:identifier")="29571-7"
- ;G("loinc:29571-7","dcterms:title")="Phe DBS Ql"
- ;G("loinc:29571-7","rdf:type")="sp:Code"
- ;G("loinc:29571-7","sp:system")="http://loinc.org/codes/"
- ;G("loinc:38478-4","dcterms:identifier")="38478-4"
- ;G("loinc:38478-4","dcterms:title")="Biotinidase DBS Ql"
- ;G("loinc:38478-4","rdf:type")="sp:Code"
- ;G("loinc:38478-4","sp:system")="http://loinc.org/codes/"
- ;G("qqWZZIew993","rdf:type")="sp:Attribution"
- ;G("qqWZZIew993","sp:startDate")="2007-04-21"
- ;G("qqWZZIew994","rdf:type")="sp:NarrativeResult"
- ;G("qqWZZIew994","sp:value")="Normal"
- ;G("qqWZZIew995","dcterms:title")="Biotinidase DBS Ql"
- ;G("qqWZZIew995","rdf:type")="sp:CodedValue"
- ;G("qqWZZIew995","sp:code")="loinc:38478-4"
- ;G("qqWZZIew997","rdf:type")="sp:Attribution"
- ;G("qqWZZIew997","sp:startDate")="2007-09-08"
- ;G("qqWZZIew998","rdf:type")="sp:NarrativeResult"
- ;G("qqWZZIew998","sp:value")="Normal"
- ;G("qqWZZIew999","dcterms:title")="Phe DBS Ql"
- ;G("qqWZZIew999","rdf:type")="sp:CodedValue"
- ;G("qqWZZIew999","sp:code")="loinc:29571-7"
- ;G("smart:99912345/lab_results/3d9b39249193","rdf:type")="sp:LabResult"
- ;G("smart:99912345/lab_results/3d9b39249193","sp:belongsTo")="smart:99912345"
- ;G("smart:99912345/lab_results/3d9b39249193","sp:labName")="qqWZZIew995"
- ;G("smart:99912345/lab_results/3d9b39249193","sp:narrativeResult")="qqWZZIew994"
- ;G("smart:99912345/lab_results/3d9b39249193","sp:specimenCollected")="qqWZZIew993"
- ;G("smart:99912345/lab_results/426c7adc4f54","rdf:type")="sp:LabResult"
- ;G("smart:99912345/lab_results/426c7adc4f54","sp:belongsTo")="smart:99912345"
- ;G("smart:99912345/lab_results/426c7adc4f54","sp:labName")="qqWZZIew999"
- ;G("smart:99912345/lab_results/426c7adc4f54","sp:narrativeResult")="qqWZZIew998"
- ;G("smart:99912345/lab_results/426c7adc4f54","sp:specimenCollected")="qqWZZIew997"
- ;
- ;
- ; another Smart example, this one with sp:quantitativeResult
- ;
- ;G("loinc:786-4","dcterms:identifier")="786-4"
- ;G("loinc:786-4","dcterms:title")="MCHC RBC Auto-mCnc"
- ;G("loinc:786-4","rdf:type")="sp:Code"
- ;G("loinc:786-4","sp:system")="http://loinc.org/codes/"
- ;G("nodeID:4439","rdf:type")="sp:ValueAndUnit"
- ;G("nodeID:4439","sp:unit")="g/dL"
- ;G("nodeID:4439","sp:value")=36.6
- ;G("nodeID:4613","rdf:type")="sp:ValueAndUnit"
- ;G("nodeID:4613","sp:unit")="g/dL"
- ;G("nodeID:4613","sp:value")=32
- ;G("nodeID:4672","rdf:type")="sp:Attribution"
- ;G("nodeID:4672","sp:startDate")="2005-03-10"
- ;G("nodeID:4866","rdf:type")="sp:ValueAndUnit"
- ;G("nodeID:4866","sp:unit")="g/dL"
- ;G("nodeID:4866","sp:value")=36
- ;G("nodeID:4871","dcterms:title")="MCHC RBC Auto-mCnc"
- ;G("nodeID:4871","rdf:type")="sp:CodedValue"
- ;G("nodeID:4871","sp:code")="loinc:786-4"
- ;G("nodeID:5221","rdf:type")="sp:QuantitativeResult"
- ;G("nodeID:5221","sp:normalRange")="nodeID:5282"
- ;G("nodeID:5221","sp:valueAndUnit")="nodeID:4439"
- ;G("nodeID:5282","rdf:type")="sp:ValueRange"
- ;G("nodeID:5282","sp:maximum")="nodeID:4866"
- ;G("nodeID:5282","sp:minimum")="nodeID:4613"
- ;G("smart:1540505/lab_results/2fc100850766","rdf:type")="sp:LabResult"
- ;G("smart:1540505/lab_results/2fc100850766","sp:belongsTo")="smart:1540505"
- ;G("smart:1540505/lab_results/2fc100850766","sp:labName")="nodeID:4871"
- ;G("smart:1540505/lab_results/2fc100850766","sp:quantitativeResult")="nodeID:5221"
- ;G("smart:1540505/lab_results/2fc100850766","sp:specimenCollected")="nodeID:4672"
- ;
-LAB(GRTN,C0SARY) ; GRTN, passed by reference,
- ; is the return name of the graph created. "" if none
- ; C0SARY is passed in by reference and is the NHIN array of lab
- ;
- I $O(C0SARY("lab",""))="" D Q ;
- . I $D(DEBUG) W !,"No Labs"
- S GRTN="" ; default to no labs
- N C0SGRF
- S C0SGRF="vistaSmart:"_ZPATID_"/lab_results"
- I $D(DEBUG) W !,"Processing ",C0SGRF
- D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
- D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
- N FARY S FARY="C0XFARY"
- D USEFARY^C0XF2N(FARY)
- D VOCINIT^C0XUTIL
- ;
- D STARTADD^C0XF2N ; initialize to create triples
- ;
- N ZI S ZI=""
- F S ZI=$O(C0SARY("lab",ZI)) Q:ZI="" D ;
- . N LRN,ZR ; ZR is the local array for building the new triples
- . S LRN=$NA(C0SARY("lab",ZI)) ; base for values in this lab result
- . ;
- . N RSLTID ; unique Id for this lab result
- . S RSLTID=C0SGRF_"/"_$$LKY17^C0XF2N ; use a random number
- . ;
- . ; i don't like this because the same labs result gets a
- . ; different ID every time it's reported. Can't trace it back to VistA
- . ; I'd rather be using id@value ie "id@value")="CH;6889372.84;67003"
- . ; .. either that or store an OID with the lab result - but that
- . ; will have to wait for the redesign of file 60.. - gpl 4/16/2012
- . ;
- . N LOINC S LOINC=$G(@LRN@("loinc@value"))
- . I LOINC="" D Q ;
- . . I $D(DEBUG) W !,"NO LOINC VALUE, SKIPPING"
- . N LABTST S LABTST=$G(@LRN@("test@value"))
- . I $D(DEBUG) D ;
- . . W !,"Processing Lab Result ",RSLTID
- . . W !,"test: ",LABTST
- . . W !,"loinc: ",LOINC
- . ;
- . ; first do the base result graph
- . ;
- . S ZR("rdf:type")="sp:LabResult"
- . S ZR("sp:belongsTo")=C0SGRF ; the subject for this patient's lab results
- . ; ie /vista/smart/99912345/lab_results
- . ;
- . N LABNAME S LABNAME=$$ANONS^C0XF2N ; new node for lab name
- . S ZR("sp:labName")=LABNAME
- . ;
- . N NARRSLT S NARRSLT=$$ANONS^C0XF2N ; new node for narrative result
- . S ZR("sp:narrativeResult")=NARRSLT
- . ;
- . N QNTRSLT S QNTRSLT=$$ANONS^C0XF2N ; new node for narrative result
- . S ZR("sp:quantitativeResult")=QNTRSLT
- . ;
- . N SPECCOLL S SPECCOLL=$$ANONS^C0XF2N ; new node for specimen collected
- . S ZR("sp:specimenCollected")=SPECCOLL
- . ;
- . D ADDINN^C0XF2N(C0SGRF,RSLTID,.ZR) ; addIfNotNull the triples
- . K ZR ; clean up
- . ;
- . ; create the narrative result graph
- . ;
- . N IVAL S IVAL=$G(@LRN@("interpretation@value"))'="" D ; H OR L
- . I IVAL'=""
- . . S ZR("rdf:type")="sp:NarrativeResult"
- . . S ZR("sp:value")=$G(@LRN@("interpretation@value")) ; H or L
- . . I ZR("sp:value")="L" S ZR("sp:value")="abnormal"
- . . I ZR("sp:value")="H" S ZR("sp:value")="abnormal"
- . . I ZR("sp:value")="HH" S ZR("sp:value")="critical"
- . . I ZR("sp:value")="LL" S ZR("sp:value")="critical"
- . . D ADDINN^C0XF2N(C0SGRF,NARRSLT,.ZR)
- . . K ZR
- . ;
- . ; create the quantitative result graph
- . ;
- . S ZR("rdf:type")="sp:QuantitativeResult"
- . N NORMNM S NORMNM=$$ANONS^C0XF2N ; new node for normal range graph
- . N VUNM S VUNM=$$ANONS^C0XF2N ; new node for value and unit graph
- . N HASNORMAL S HASNORMAL=0
- . I $G(@LRN@("high@value"))'="" S HASNORMAL=1
- . I HASNORMAL S ZR("sp:normalRange")=NORMNM
- . S ZR("sp:valueAndUnit")=VUNM
- . D ADDINN^C0XF2N(C0SGRF,QNTRSLT,.ZR)
- . K ZR
- . ;
- . ; create the normal range graph
- . ;
- . I HASNORMAL D ;
- . . S ZR("rdf:type")="sp:ValueRange"
- . . N MAXNM S MAXNM=$$ANONS^C0XF2N ; new node for maximum graph
- . . N MINNM S MINNM=$$ANONS^C0XF2N ; new node for minimum graph
- . . S ZR("sp:maximum")=MAXNM
- . . S ZR("sp:minimum")=MINNM
- . . D ADDINN^C0XF2N(C0SGRF,NORMNM,.ZR)
- . . K ZR
- . . ;
- . . ; create the maximum graph
- . . ;
- . . S ZR("rdf:type")="sp:ValueAndUnit"
- . . S ZR("sp:unit")=$G(@LRN@("units@value"))
- . . S ZR("sp:value")=$G(@LRN@("high@value"))
- . . D ADDINN^C0XF2N(C0SGRF,MAXNM,.ZR)
- . . K ZR
- . . ;
- . . ; create the minimum graph
- . . ;
- . . S ZR("rdf:type")="sp:ValueAndUnit"
- . . S ZR("sp:unit")=$G(@LRN@("units@value"))
- . . S ZR("sp:value")=$G(@LRN@("low@value"))
- . . D ADDINN^C0XF2N(C0SGRF,MINNM,.ZR)
- . . K ZR
- . ;
- . ; create the value and unit graph
- . ;
- . S ZR("rdf:type")="sp:ValueAndUnit"
- . S ZR("sp:unit")=$G(@LRN@("units@value"))
- . I ZR("sp:unit")="" S ZR("sp:unit")="{unknown}" ;$G(@LRN@("test@value"))
- . S ZR("sp:value")=$G(@LRN@("result@value"))
- . D ADDINN^C0XF2N(C0SGRF,VUNM,.ZR)
- . K ZR
- . ;
- . ; create specimen collected graph
- . ;
- . S ZR("rdf:type")="sp:Attribution"
- . S ZR("sp:startDate")=$$SPDATE^C0SUTIL($G(@LRN@("collected@value")))
- . D ADDINN^C0XF2N(C0SGRF,SPECCOLL,.ZR)
- . K ZR
- . ;
- . ; create lab name graph - this contains the test name and code
- . ;
- . I LOINC'="" D ;
- . . S ZR("rdf:type")="sp:CodedValue"
- . . S ZR("dcterms:title")=LABTST
- . . N LOINCNM S LOINCNM="loinc:"_LOINC
- . . S ZR("sp:code")="loinc:"_LOINC
- . . D ADDINN^C0XF2N(C0SGRF,LABNAME,.ZR)
- . . K ZR
- . . S ZR("dcterms:identifier")=LOINC
- . . S ZR("dcterms:title")=LABTST
- . . S ZR("rdf:type")="sp:Code"
- . . S ZR("sp:system")="http://loinc.org/codes/"
- . . D ADDINN^C0XF2N(C0SGRF,LOINCNM,.ZR)
- . . K ZR
- . ;
- . ; that's all for now folks (there is more to do like reference ranges
- . ; and result values)
- . ;
- D BULKLOAD^C0XF2N(.C0XFDA)
- S GRTN=C0SGRF
- Q
- ;
-SAMPLE ; import sample lab tests to the triplestore
- N GN
- S GN=$NA(^rdf("lab_results"))
- D INSRDF^C0XF2N(GN,"/smart/lab/samples")
- Q
- ;
+C0SLAB ; GPL - Smart Lab Processing ;4/15/12 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ Q
+ ;
+ ; sample VistA NHIN lab result
+ ;
+ ;^TMP("C0STBL",32,"lab",8,"collected@value")=3110626.16
+ ;^TMP("C0STBL",32,"lab",8,"comment")="Report Released Date/Time: Jun 26, 2011@19:00"
+ ;^TMP("C0STBL",32,"lab",8,"comment@xml:space")="preserve"
+ ;^TMP("C0STBL",32,"lab",8,"facility@code")=100
+ ;^TMP("C0STBL",32,"lab",8,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",32,"lab",8,"groupName@value")="CH 0626 47"
+ ;^TMP("C0STBL",32,"lab",8,"high@value")=" 101"
+ ;^TMP("C0STBL",32,"lab",8,"id@value")="CH;6889372.84;67003"
+ ;^TMP("C0STBL",32,"lab",8,"interpretation@value")="H"
+ ;^TMP("C0STBL",32,"lab",8,"labOrderID@value")=336
+ ;^TMP("C0STBL",32,"lab",8,"localName@value")="FBLDGLU"
+ ;^TMP("C0STBL",32,"lab",8,"loinc@value")="14771-0"
+ ;^TMP("C0STBL",32,"lab",8,"low@value")="69 "
+ ;^TMP("C0STBL",32,"lab",8,"orderID@value")=807
+ ;^TMP("C0STBL",32,"lab",8,"result@value")=178
+ ;^TMP("C0STBL",32,"lab",8,"resulted@value")=3110626.190006
+ ;^TMP("C0STBL",32,"lab",8,"sample@value")="SERUM"
+ ;^TMP("C0STBL",32,"lab",8,"specimen@code")="0X500"
+ ;^TMP("C0STBL",32,"lab",8,"specimen@name")="SERUM"
+ ;^TMP("C0STBL",32,"lab",8,"status@value")="completed"
+ ;^TMP("C0STBL",32,"lab",8,"test@value")="FASTING BLOOD GLUCOSE"
+ ;^TMP("C0STBL",32,"lab",8,"type@value")="CH"
+ ;^TMP("C0STBL",32,"lab",8,"units@value")="MG/DL"
+ ;^TMP("C0STBL",32,"lab",8,"vuid@value")=4656342
+ ;
+ ; sample Smart lab result triples
+ ;
+ ;G("loinc:29571-7","dcterms:identifier")="29571-7"
+ ;G("loinc:29571-7","dcterms:title")="Phe DBS Ql"
+ ;G("loinc:29571-7","rdf:type")="sp:Code"
+ ;G("loinc:29571-7","sp:system")="http://loinc.org/codes/"
+ ;G("loinc:38478-4","dcterms:identifier")="38478-4"
+ ;G("loinc:38478-4","dcterms:title")="Biotinidase DBS Ql"
+ ;G("loinc:38478-4","rdf:type")="sp:Code"
+ ;G("loinc:38478-4","sp:system")="http://loinc.org/codes/"
+ ;G("qqWZZIew993","rdf:type")="sp:Attribution"
+ ;G("qqWZZIew993","sp:startDate")="2007-04-21"
+ ;G("qqWZZIew994","rdf:type")="sp:NarrativeResult"
+ ;G("qqWZZIew994","sp:value")="Normal"
+ ;G("qqWZZIew995","dcterms:title")="Biotinidase DBS Ql"
+ ;G("qqWZZIew995","rdf:type")="sp:CodedValue"
+ ;G("qqWZZIew995","sp:code")="loinc:38478-4"
+ ;G("qqWZZIew997","rdf:type")="sp:Attribution"
+ ;G("qqWZZIew997","sp:startDate")="2007-09-08"
+ ;G("qqWZZIew998","rdf:type")="sp:NarrativeResult"
+ ;G("qqWZZIew998","sp:value")="Normal"
+ ;G("qqWZZIew999","dcterms:title")="Phe DBS Ql"
+ ;G("qqWZZIew999","rdf:type")="sp:CodedValue"
+ ;G("qqWZZIew999","sp:code")="loinc:29571-7"
+ ;G("smart:99912345/lab_results/3d9b39249193","rdf:type")="sp:LabResult"
+ ;G("smart:99912345/lab_results/3d9b39249193","sp:belongsTo")="smart:99912345"
+ ;G("smart:99912345/lab_results/3d9b39249193","sp:labName")="qqWZZIew995"
+ ;G("smart:99912345/lab_results/3d9b39249193","sp:narrativeResult")="qqWZZIew994"
+ ;G("smart:99912345/lab_results/3d9b39249193","sp:specimenCollected")="qqWZZIew993"
+ ;G("smart:99912345/lab_results/426c7adc4f54","rdf:type")="sp:LabResult"
+ ;G("smart:99912345/lab_results/426c7adc4f54","sp:belongsTo")="smart:99912345"
+ ;G("smart:99912345/lab_results/426c7adc4f54","sp:labName")="qqWZZIew999"
+ ;G("smart:99912345/lab_results/426c7adc4f54","sp:narrativeResult")="qqWZZIew998"
+ ;G("smart:99912345/lab_results/426c7adc4f54","sp:specimenCollected")="qqWZZIew997"
+ ;
+ ;
+ ; another Smart example, this one with sp:quantitativeResult
+ ;
+ ;G("loinc:786-4","dcterms:identifier")="786-4"
+ ;G("loinc:786-4","dcterms:title")="MCHC RBC Auto-mCnc"
+ ;G("loinc:786-4","rdf:type")="sp:Code"
+ ;G("loinc:786-4","sp:system")="http://loinc.org/codes/"
+ ;G("nodeID:4439","rdf:type")="sp:ValueAndUnit"
+ ;G("nodeID:4439","sp:unit")="g/dL"
+ ;G("nodeID:4439","sp:value")=36.6
+ ;G("nodeID:4613","rdf:type")="sp:ValueAndUnit"
+ ;G("nodeID:4613","sp:unit")="g/dL"
+ ;G("nodeID:4613","sp:value")=32
+ ;G("nodeID:4672","rdf:type")="sp:Attribution"
+ ;G("nodeID:4672","sp:startDate")="2005-03-10"
+ ;G("nodeID:4866","rdf:type")="sp:ValueAndUnit"
+ ;G("nodeID:4866","sp:unit")="g/dL"
+ ;G("nodeID:4866","sp:value")=36
+ ;G("nodeID:4871","dcterms:title")="MCHC RBC Auto-mCnc"
+ ;G("nodeID:4871","rdf:type")="sp:CodedValue"
+ ;G("nodeID:4871","sp:code")="loinc:786-4"
+ ;G("nodeID:5221","rdf:type")="sp:QuantitativeResult"
+ ;G("nodeID:5221","sp:normalRange")="nodeID:5282"
+ ;G("nodeID:5221","sp:valueAndUnit")="nodeID:4439"
+ ;G("nodeID:5282","rdf:type")="sp:ValueRange"
+ ;G("nodeID:5282","sp:maximum")="nodeID:4866"
+ ;G("nodeID:5282","sp:minimum")="nodeID:4613"
+ ;G("smart:1540505/lab_results/2fc100850766","rdf:type")="sp:LabResult"
+ ;G("smart:1540505/lab_results/2fc100850766","sp:belongsTo")="smart:1540505"
+ ;G("smart:1540505/lab_results/2fc100850766","sp:labName")="nodeID:4871"
+ ;G("smart:1540505/lab_results/2fc100850766","sp:quantitativeResult")="nodeID:5221"
+ ;G("smart:1540505/lab_results/2fc100850766","sp:specimenCollected")="nodeID:4672"
+ ;
+LAB(GRTN,C0SARY) ; GRTN, passed by reference,
+ ; is the return name of the graph created. "" if none
+ ; C0SARY is passed in by reference and is the NHIN array of lab
+ ;
+ I $O(C0SARY("lab",""))="" D Q ;
+ . I $D(DEBUG) W !,"No Labs"
+ S GRTN="" ; default to no labs
+ N C0SGRF
+ S C0SGRF="vistaSmart:"_ZPATID_"/lab_results"
+ I $D(DEBUG) W !,"Processing ",C0SGRF
+ D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
+ D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
+ N FARY S FARY="C0XFARY"
+ D USEFARY^C0XF2N(FARY)
+ D VOCINIT^C0XUTIL
+ ;
+ D STARTADD^C0XF2N ; initialize to create triples
+ ;
+ N ZI S ZI=""
+ F S ZI=$O(C0SARY("lab",ZI)) Q:ZI="" D ;
+ . N LRN,ZR ; ZR is the local array for building the new triples
+ . S LRN=$NA(C0SARY("lab",ZI)) ; base for values in this lab result
+ . ;
+ . N RSLTID ; unique Id for this lab result
+ . S RSLTID=C0SGRF_"/"_$$LKY17^C0XF2N ; use a random number
+ . ;
+ . ; i don't like this because the same labs result gets a
+ . ; different ID every time it's reported. Can't trace it back to VistA
+ . ; I'd rather be using id@value ie "id@value")="CH;6889372.84;67003"
+ . ; .. either that or store an OID with the lab result - but that
+ . ; will have to wait for the redesign of file 60.. - gpl 4/16/2012
+ . ;
+ . N LOINC S LOINC=$G(@LRN@("loinc@value"))
+ . I LOINC="" D Q ;
+ . . I $D(DEBUG) W !,"NO LOINC VALUE, SKIPPING"
+ . N LABTST S LABTST=$G(@LRN@("test@value"))
+ . I $D(DEBUG) D ;
+ . . W !,"Processing Lab Result ",RSLTID
+ . . W !,"test: ",LABTST
+ . . W !,"loinc: ",LOINC
+ . ;
+ . ; first do the base result graph
+ . ;
+ . S ZR("rdf:type")="sp:LabResult"
+ . S ZR("sp:belongsTo")=C0SGRF ; the subject for this patient's lab results
+ . ; ie /vista/smart/99912345/lab_results
+ . ;
+ . N LABNAME S LABNAME=$$ANONS^C0XF2N ; new node for lab name
+ . S ZR("sp:labName")=LABNAME
+ . ;
+ . N NARRSLT S NARRSLT=$$ANONS^C0XF2N ; new node for narrative result
+ . S ZR("sp:narrativeResult")=NARRSLT
+ . ;
+ . N QNTRSLT S QNTRSLT=$$ANONS^C0XF2N ; new node for narrative result
+ . S ZR("sp:quantitativeResult")=QNTRSLT
+ . ;
+ . N SPECCOLL S SPECCOLL=$$ANONS^C0XF2N ; new node for specimen collected
+ . S ZR("sp:specimenCollected")=SPECCOLL
+ . ;
+ . D ADDINN^C0XF2N(C0SGRF,RSLTID,.ZR) ; addIfNotNull the triples
+ . K ZR ; clean up
+ . ;
+ . ; create the narrative result graph
+ . ;
+ . N IVAL S IVAL=$G(@LRN@("interpretation@value"))'="" D ; H OR L
+ . I IVAL'=""
+ . . S ZR("rdf:type")="sp:NarrativeResult"
+ . . S ZR("sp:value")=$G(@LRN@("interpretation@value")) ; H or L
+ . . I ZR("sp:value")="L" S ZR("sp:value")="abnormal"
+ . . I ZR("sp:value")="H" S ZR("sp:value")="abnormal"
+ . . I ZR("sp:value")="HH" S ZR("sp:value")="critical"
+ . . I ZR("sp:value")="LL" S ZR("sp:value")="critical"
+ . . D ADDINN^C0XF2N(C0SGRF,NARRSLT,.ZR)
+ . . K ZR
+ . ;
+ . ; create the quantitative result graph
+ . ;
+ . S ZR("rdf:type")="sp:QuantitativeResult"
+ . N NORMNM S NORMNM=$$ANONS^C0XF2N ; new node for normal range graph
+ . N VUNM S VUNM=$$ANONS^C0XF2N ; new node for value and unit graph
+ . N HASNORMAL S HASNORMAL=0
+ . I $G(@LRN@("high@value"))'="" S HASNORMAL=1
+ . I HASNORMAL S ZR("sp:normalRange")=NORMNM
+ . S ZR("sp:valueAndUnit")=VUNM
+ . D ADDINN^C0XF2N(C0SGRF,QNTRSLT,.ZR)
+ . K ZR
+ . ;
+ . ; create the normal range graph
+ . ;
+ . I HASNORMAL D ;
+ . . S ZR("rdf:type")="sp:ValueRange"
+ . . N MAXNM S MAXNM=$$ANONS^C0XF2N ; new node for maximum graph
+ . . N MINNM S MINNM=$$ANONS^C0XF2N ; new node for minimum graph
+ . . S ZR("sp:maximum")=MAXNM
+ . . S ZR("sp:minimum")=MINNM
+ . . D ADDINN^C0XF2N(C0SGRF,NORMNM,.ZR)
+ . . K ZR
+ . . ;
+ . . ; create the maximum graph
+ . . ;
+ . . S ZR("rdf:type")="sp:ValueAndUnit"
+ . . S ZR("sp:unit")=$G(@LRN@("units@value"))
+ . . S ZR("sp:value")=$G(@LRN@("high@value"))
+ . . D ADDINN^C0XF2N(C0SGRF,MAXNM,.ZR)
+ . . K ZR
+ . . ;
+ . . ; create the minimum graph
+ . . ;
+ . . S ZR("rdf:type")="sp:ValueAndUnit"
+ . . S ZR("sp:unit")=$G(@LRN@("units@value"))
+ . . S ZR("sp:value")=$G(@LRN@("low@value"))
+ . . D ADDINN^C0XF2N(C0SGRF,MINNM,.ZR)
+ . . K ZR
+ . ;
+ . ; create the value and unit graph
+ . ;
+ . S ZR("rdf:type")="sp:ValueAndUnit"
+ . S ZR("sp:unit")=$G(@LRN@("units@value"))
+ . I ZR("sp:unit")="" S ZR("sp:unit")="{unknown}" ; was $G(@LRN@("test@value")) gpl
+ . S ZR("sp:value")=$G(@LRN@("result@value"))
+ . D ADDINN^C0XF2N(C0SGRF,VUNM,.ZR)
+ . K ZR
+ . ;
+ . ; create specimen collected graph
+ . ;
+ . S ZR("rdf:type")="sp:Attribution"
+ . S ZR("sp:startDate")=$$SPDATE^C0SUTIL($G(@LRN@("collected@value")))
+ . D ADDINN^C0XF2N(C0SGRF,SPECCOLL,.ZR)
+ . K ZR
+ . ;
+ . ; create lab name graph - this contains the test name and code
+ . ;
+ . I LOINC'="" D ;
+ . . S ZR("rdf:type")="sp:CodedValue"
+ . . S ZR("dcterms:title")=LABTST
+ . . N LOINCNM S LOINCNM="loinc:"_LOINC
+ . . S ZR("sp:code")="loinc:"_LOINC
+ . . D ADDINN^C0XF2N(C0SGRF,LABNAME,.ZR)
+ . . K ZR
+ . . S ZR("dcterms:identifier")=LOINC
+ . . S ZR("dcterms:title")=LABTST
+ . . S ZR("rdf:type")="sp:Code"
+ . . S ZR("sp:system")="http://loinc.org/codes/"
+ . . D ADDINN^C0XF2N(C0SGRF,LOINCNM,.ZR)
+ . . K ZR
+ . ;
+ . ; that's all for now folks (there is more to do like reference ranges
+ . ; and result values)
+ . ;
+ D BULKLOAD^C0XF2N(.C0XFDA)
+ S GRTN=C0SGRF
+ Q
+ ;
+SAMPLE ; import sample lab tests to the triplestore
+ N GN
+ S GN=$NA(^rdf("lab_results"))
+ D INSRDF^C0XF2N(GN,"/smart/lab/samples")
+ Q
+ ;
Index: smart/trunk/p/C0SMART.m
===================================================================
--- smart/trunk/p/C0SMART.m (revision 1569)
+++ smart/trunk/p/C0SMART.m (revision 1571)
@@ -1,56 +1,56 @@
-C0SMART ; GPL - Smart Container Entry Points;2/22/12 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
- ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- Q
-EN(ZRTN,ZPATID,ZTYP,ZFORM,DEBUG) ; return a Smart RDF file section ZTYP
- ; for patient ZPATID; ZFORM defaults to rdf
- ; ZRTN is passed by reference
- ; For now, ZPATID is the DFN
- ;
- I '$D(ZFORM) S ZFORM="rdf"
- K ZRTN ; CLEAN RETURN
- N C0SARY
- I ZTYP="patient" D EN^C0SNHIN(.C0SARY,ZPATID,"patient")
- E D EN^C0SNHIN(.C0SARY,ZPATID,"patient;"_ZTYP)
- I $G(C0SARY("patient",1,"id@value"))'=ZPATID D Q ;
- . W !,"Error Retreiving Patient Record"
- ;
- K C0XFDA
- ;
- N C0SGR ; graph
- ;
- ; processing table
- ;
- N C0SCTRL
- S C0SCTRL("med")="D MED^C0SMED(.C0SGR,.C0SARY)"
- S C0SCTRL("patient")="D PATIENT^C0SDEM(.C0SGR,.C0SARY)"
- S C0SCTRL("lab")="D LAB^C0SLAB(.C0SGR,.C0SARY)"
- S C0SCTRL("problem")="D PROB^C0SPROB2(.C0SGR,.C0SARY)"
- ;
- I '$D(C0SCTRL(ZTYP)) W !,ZTYP," ","Not Supported" Q ;
- N ZX
- S ZX=C0SCTRL(ZTYP)
- X ZX ;
- ;
- I '$D(C0SGR) Q ;
- ;
- D getGraph^C0XGET1(.ZRTN,C0SGR,ZFORM)
- ;
- Q
- ;
+C0SMART ; GPL - Smart Container Entry Points;2/22/12 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ Q
+EN(ZRTN,ZPATID,ZTYP,ZFORM,DEBUG) ; return a Smart RDF file section ZTYP
+ ; for patient ZPATID; ZFORM defaults to rdf
+ ; ZRTN is passed by reference
+ ; For now, ZPATID is the DFN
+ ;
+ I '$D(ZFORM) S ZFORM="rdf"
+ K ZRTN ; CLEAN RETURN
+ N C0SARY
+ I ZTYP="patient" D EN^C0SNHIN(.C0SARY,ZPATID,"patient")
+ E D EN^C0SNHIN(.C0SARY,ZPATID,"patient;"_ZTYP)
+ I $G(C0SARY("patient",1,"id@value"))'=ZPATID D Q ;
+ . W !,"Error Retreiving Patient Record"
+ ;
+ K C0XFDA
+ ;
+ N C0SGR ; graph
+ ;
+ ; processing table
+ ;
+ N C0SCTRL
+ S C0SCTRL("med")="D MED^C0SMED(.C0SGR,.C0SARY)"
+ S C0SCTRL("patient")="D PATIENT^C0SDEM(.C0SGR,.C0SARY)"
+ S C0SCTRL("lab")="D LAB^C0SLAB(.C0SGR,.C0SARY)"
+ S C0SCTRL("problem")="D PROB^C0SPROB2(.C0SGR,.C0SARY)"
+ ;
+ I '$D(C0SCTRL(ZTYP)) W !,ZTYP," ","Not Supported" Q ;
+ N ZX
+ S ZX=C0SCTRL(ZTYP)
+ X ZX ;
+ ;
+ I '$D(C0SGR) Q ;
+ ;
+ D getGraph^C0XGET1(.ZRTN,C0SGR,ZFORM)
+ ;
+ Q
+ ;
Index: smart/trunk/p/C0SMED.m
===================================================================
--- smart/trunk/p/C0SMED.m (revision 1569)
+++ smart/trunk/p/C0SMED.m (revision 1571)
@@ -1,157 +1,157 @@
-C0SMED ; GPL - Smart Meds Processing ;2/22/12 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
- ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- Q
- ;
-MED(GRTN,C0SARY) ; GRTN, passed by reference,
- ; is the return name of the graph created. "" if none
- ; C0SARY is passed in by reference and is the NHIN array of meds
- ;
- I $O(C0SARY("med",""))="" D Q ;
- . I $D(DEBUG) W !,"No Meds"
- S GRTN="" ; default to no meds
- N C0SGRF
- S C0SGRF="vistaSmart:"_ZPATID_"/"_ZTYP
- I $D(DEBUG) W !,"Processing ",C0SGRF
- D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
- N MEDTRP ; MEDS TRIPLES
- D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
- N FARY S FARY="C0XFARY"
- D USEFARY^C0XF2N(FARY)
- D VOCINIT^C0XUTIL
- ;
- N DUPCHK S DUPCHK="" ; check for no duplicates
- N ZI S ZI=""
- F S ZI=$O(C0SARY("med",ZI)) Q:ZI="" D ;
- . N SDATE,SDTMP
- . I $G(C0SARY("med",ZI,"vaStatus@value"))="EXPIRED" D Q ;
- . . I $D(DEBUG) W !,"Expired Mediation, Skipping"
- . I $G(COSARY("med",ZI,"vaType@value"))="I" D Q ;
- . . I $D(DEBUG) W !,"Inpatient Med, skipping"
- . I $G(COSARY("med",ZI,"vaType@value"))="V" D Q ;
- . . I $D(DEBUG) W !,"IV Inpatient Med, skipping"
- . ;
- . S SDTMP=$G(C0SARY("med",ZI,"ordered@value"))
- . I SDTMP="" D ;
- . . S SDTMP=$G(C0SARY("med",ZI,"start@value"))
- . S SDATE=$$FMTE^XLFDT(SDTMP,"7D") ; ordered date
- . S SDATE=$TR(SDATE,"/","-") ; change slashes to hyphens
- . I SDATE="" S SDATE="UNKNOWN"
- . N DNAME,VUID,DCODE,RXNORM,SIG
- . S DNAME=$G(C0SARY("med",ZI,"name@value"))
- . I DNAME="" D ;
- . . S DNAME=$G(C0SARY("med",ZI,"products.product@name"))
- . S VUID=$G(C0SARY("med",ZI,"products.product.vaProduct@vuid"))
- . S DCODE=$G(C0SARY("med",ZI,"products.product.vaProduct@code"))
- . I DCODE="" S DCODE=$G(C0SARY("med",ZI,"id@value"))
- . S RXNORM=$$RXCUI(VUID) ; look up RxNorm code
- . I $P(RXNORM,"^",2)="RXNORM" D ;
- . . S RXVER=$P(RXNORM,"^",3)
- . . S RXNORM=$P(RXNORM,"^",1)
- . E D Q ;
- . . I $D(DEBUG) W !,"NO RXNORM NUMBER AVAILABLE"
- . . I $D(DEBUG) W !,RXNORM
- . I DNAME="" D Q ;
- . . I $D(DEBUG) W !,"Error No Drug Name"
- . S MEDGRF=C0SGRF_"/"_DCODE_"-"_$G(SDTMP)
- . I +$D(DUPCHK(MEDGRF)) D Q ; NO DUPS ALLOWED
- . . I $D(DEBUG) W !,"Found Duplicate Medication ",MEDGRF
- . S DUPCHK(MEDGRF)=""
- . I $D(DEBUG) D ;
- . . W !,"Processing Medication ",MEDGRF
- . . W !,DNAME
- . . W !,RXNORM
- . S SIG=$G(C0SARY("med",ZI,"sig"))
- . I SIG["|" D ;
- . . N SIGTMP
- . . S SIGTMP=SIG
- . . S SIG=$P(SIGTMP,"|",2) ; remove the drug name from the sig
- . . I DNAME["FREE TXT" D ; eRx free text drug, get drug name from sig
- . . . S DNAME=$P(SIGTMP,"|",1) ; eRx Drug name is stored as the first piece of the sig
- . K C0XFARY
- . D ADD^C0XF2N(C0SGRF,MEDGRF,"rdf:type","sp:Medication",FARY)
- . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:belongsTo",C0SGRF,FARY)
- . N DSUBJ S DSUBJ=$$ANONS^C0XF2N ; anonomous subject
- . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:drugName",DSUBJ,FARY)
- . I SIG'="" D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:instructions",SIG,FARY)
- . N NQTY,NQTY2,NFREQ,NFREQ2
- . S NQTY=$$ANONS^C0XF2N ; anonomous subject
- . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:quantity",NQTY,FARY)
- . S NQTY2=$$ANONS^C0XF2N ; anonomous subject
- . D ADD^C0XF2N(C0SGRF,NQTY,"sp:ValueAndUnit",NQTY2,FARY)
- . N DOSE S DOSE=$G(C0SARY("med",ZI,"doses.dose@dose"))
- . I DOSE="" S DOSE="UNKNOWN"
- . N UNIT S UNIT=$G(C0SARY("med",ZI,"doses.dose@units"))
- . I UNIT="" S UNIT="UNKNOWN"
- . D ADD^C0XF2N(C0SGRF,NQTY2,"sp:value",DOSE,FARY)
- . D ADD^C0XF2N(C0SGRF,NQTY2,"sp:unit",UNIT,FARY)
- . S NFREQ=$$ANONS^C0XF2N ; anonomous subject
- . S NFREQ2=$$ANONS^C0XF2N ; anonomous subject
- . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:frequency",NFREQ,FARY)
- . D ADD^C0XF2N(C0SGRF,NFREQ,"sp:ValueAndUnit",NFREQ2,FARY)
- . N SCHED S SCHED=$G(C0SARY("med",ZI,"doses.dose@schedule"))
- . I SCHED="" S SCHED="UNKNOWN"
- . N SCHUNIT S SCHUNIT=$G(C0SARY("med",ZI,"doses.dose@route"))
- . I SCHUNIT="" S SCHUNIT="UNKNOWN"
- . D ADD^C0XF2N(C0SGRF,NFREQ2,"sp:value",SCHED,FARY)
- . D ADD^C0XF2N(C0SGRF,NFREQ2,"sp:unit",SCHUNIT,FARY)
- . D ADD^C0XF2N(C0SGRF,DSUBJ,"rdf:type","sp:CodedValue",FARY)
- . D ADD^C0XF2N(C0SGRF,DSUBJ,"sp:code","rxnorm:"_RXNORM,FARY)
- . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"rdf:type","sp:Code",FARY)
- . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"dcterms:title",DNAME,FARY)
- . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"sp:system","rxnorm:",FARY)
- . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"dcterms:identifier",RXNORM,FARY)
- . D ADD^C0XF2N(C0SGRF,DSUBJ,"dcterms:title",DNAME,FARY)
- . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:startDate",SDATE,FARY)
- . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"rdf:type","http://smartplatforms.org/terms/codes/RxNorm_Semantic",FARY)
- . D BULKLOAD^C0XF2N(.C0XFDA)
- . K C0XFDA
- S GRTN=C0SGRF
- q
- ;
-RXNFN() Q 1130590011.001 ; RxNorm Concepts file number
- ;
-RXCUI(ZVUID) ; EXTRINSIC WHICH RETURNS THE RXNORM CODE IF KNOWN OF
- ; THE VUID - RETURNS CODE^SYSTEM^VERSION TO USE IN THE CCR
- N ZRSLT S ZRSLT=ZVUID_"^"_"VUID"_"^" ; DEFAULT
- I $G(ZVUID)="" Q ""
- I '$D(^C0P("RXN")) Q ZRSLT ; ERX NOT INSTALLED
- N C0PIEN ; S C0PIEN=$$FIND1^DIC($$RXNFN,"","QX",ZVUID,"VUID")
- S C0PIEN=$O(^C0P("RXN","VUID",ZVUID,"")) ;GPL FIX FOR MULTIPLES
- N ZRXN S ZRXN=$$GET1^DIQ($$RXNFN,C0PIEN,.01)
- S ZRXN=$$NISTMAP(ZRXN) ; CHANGE THE CODE IF NEEDED
- I ZRXN'="" S ZRSLT=ZRXN_"^RXNORM^08AB_081201F"
- Q ZRSLT
- ;
-NISTMAP(ZRXN) ; EXTRINSIC WHICH MAPS SOME RXNORM NUMBERS TO
- ; CONFORM TO NIST REQUIREMENTS
- ;INPATIENT CERTIFICATION
- I ZRXN=309362 S ZRXN=213169
- I ZRXN=855318 S ZRXN=855320
- I ZRXN=197361 S ZRXN=212549
- ;OUTPATIENT CERTIFICATION
- I ZRXN=310534 S ZRXN=205875
- I ZRXN=617312 S ZRXN=617314
- I ZRXN=310429 S ZRXN=200801
- I ZRXN=628953 S ZRXN=628958
- I ZRXN=745679 S ZRXN=630208
- I ZRXN=311564 S ZRXN=979334
- I ZRXN=836343 S ZRXN=836370
- Q ZRXN
- ;
+C0SMED ; GPL - Smart Meds Processing ;2/22/12 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ Q
+ ;
+MED(GRTN,C0SARY) ; GRTN, passed by reference,
+ ; is the return name of the graph created. "" if none
+ ; C0SARY is passed in by reference and is the NHIN array of meds
+ ;
+ I $O(C0SARY("med",""))="" D Q ;
+ . I $D(DEBUG) W !,"No Meds"
+ S GRTN="" ; default to no meds
+ N C0SGRF
+ S C0SGRF="vistaSmart:"_ZPATID_"/"_ZTYP
+ I $D(DEBUG) W !,"Processing ",C0SGRF
+ D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
+ N MEDTRP ; MEDS TRIPLES
+ D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
+ N FARY S FARY="C0XFARY"
+ D USEFARY^C0XF2N(FARY)
+ D VOCINIT^C0XUTIL
+ ;
+ N DUPCHK S DUPCHK="" ; check for no duplicates
+ N ZI S ZI=""
+ F S ZI=$O(C0SARY("med",ZI)) Q:ZI="" D ;
+ . N SDATE,SDTMP
+ . I $G(C0SARY("med",ZI,"vaStatus@value"))="EXPIRED" D Q ;
+ . . I $D(DEBUG) W !,"Expired Mediation, Skipping"
+ . I $G(COSARY("med",ZI,"vaType@value"))="I" D Q ;
+ . . I $D(DEBUG) W !,"Inpatient Med, skipping"
+ . I $G(COSARY("med",ZI,"vaType@value"))="V" D Q ;
+ . . I $D(DEBUG) W !,"IV Inpatient Med, skipping"
+ . ;
+ . S SDTMP=$G(C0SARY("med",ZI,"ordered@value"))
+ . I SDTMP="" D ;
+ . . S SDTMP=$G(C0SARY("med",ZI,"start@value"))
+ . S SDATE=$$FMTE^XLFDT(SDTMP,"7D") ; ordered date
+ . S SDATE=$TR(SDATE,"/","-") ; change slashes to hyphens
+ . I SDATE="" S SDATE="UNKNOWN"
+ . N DNAME,VUID,DCODE,RXNORM,SIG
+ . S DNAME=$G(C0SARY("med",ZI,"name@value"))
+ . I DNAME="" D ;
+ . . S DNAME=$G(C0SARY("med",ZI,"products.product@name"))
+ . S VUID=$G(C0SARY("med",ZI,"products.product.vaProduct@vuid"))
+ . S DCODE=$G(C0SARY("med",ZI,"products.product.vaProduct@code"))
+ . I DCODE="" S DCODE=$G(C0SARY("med",ZI,"id@value"))
+ . S RXNORM=$$RXCUI(VUID) ; look up RxNorm code
+ . I $P(RXNORM,"^",2)="RXNORM" D ;
+ . . S RXVER=$P(RXNORM,"^",3)
+ . . S RXNORM=$P(RXNORM,"^",1)
+ . E D Q ;
+ . . I $D(DEBUG) W !,"NO RXNORM NUMBER AVAILABLE"
+ . . I $D(DEBUG) W !,RXNORM
+ . I DNAME="" D Q ;
+ . . I $D(DEBUG) W !,"Error No Drug Name"
+ . S MEDGRF=C0SGRF_"/"_DCODE_"-"_$G(SDTMP)
+ . I +$D(DUPCHK(MEDGRF)) D Q ; NO DUPS ALLOWED
+ . . I $D(DEBUG) W !,"Found Duplicate Medication ",MEDGRF
+ . S DUPCHK(MEDGRF)=""
+ . I $D(DEBUG) D ;
+ . . W !,"Processing Medication ",MEDGRF
+ . . W !,DNAME
+ . . W !,RXNORM
+ . S SIG=$G(C0SARY("med",ZI,"sig"))
+ . I SIG["|" D ;
+ . . N SIGTMP
+ . . S SIGTMP=SIG
+ . . S SIG=$P(SIGTMP,"|",2) ; remove the drug name from the sig
+ . . I DNAME["FREE TXT" D ; eRx free text drug, get drug name from sig
+ . . . S DNAME=$P(SIGTMP,"|",1) ; eRx Drug name is stored as the first piece of the sig
+ . K C0XFARY
+ . D ADD^C0XF2N(C0SGRF,MEDGRF,"rdf:type","sp:Medication",FARY)
+ . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:belongsTo",C0SGRF,FARY)
+ . N DSUBJ S DSUBJ=$$ANONS^C0XF2N ; anonomous subject
+ . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:drugName",DSUBJ,FARY)
+ . I SIG'="" D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:instructions",SIG,FARY)
+ . N NQTY,NQTY2,NFREQ,NFREQ2
+ . S NQTY=$$ANONS^C0XF2N ; anonomous subject
+ . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:quantity",NQTY,FARY)
+ . S NQTY2=$$ANONS^C0XF2N ; anonomous subject
+ . D ADD^C0XF2N(C0SGRF,NQTY,"sp:ValueAndUnit",NQTY2,FARY)
+ . N DOSE S DOSE=$G(C0SARY("med",ZI,"doses.dose@dose"))
+ . I DOSE="" S DOSE="UNKNOWN"
+ . N UNIT S UNIT=$G(C0SARY("med",ZI,"doses.dose@units"))
+ . I UNIT="" S UNIT="UNKNOWN"
+ . D ADD^C0XF2N(C0SGRF,NQTY2,"sp:value",DOSE,FARY)
+ . D ADD^C0XF2N(C0SGRF,NQTY2,"sp:unit",UNIT,FARY)
+ . S NFREQ=$$ANONS^C0XF2N ; anonomous subject
+ . S NFREQ2=$$ANONS^C0XF2N ; anonomous subject
+ . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:frequency",NFREQ,FARY)
+ . D ADD^C0XF2N(C0SGRF,NFREQ,"sp:ValueAndUnit",NFREQ2,FARY)
+ . N SCHED S SCHED=$G(C0SARY("med",ZI,"doses.dose@schedule"))
+ . I SCHED="" S SCHED="UNKNOWN"
+ . N SCHUNIT S SCHUNIT=$G(C0SARY("med",ZI,"doses.dose@route"))
+ . I SCHUNIT="" S SCHUNIT="UNKNOWN"
+ . D ADD^C0XF2N(C0SGRF,NFREQ2,"sp:value",SCHED,FARY)
+ . D ADD^C0XF2N(C0SGRF,NFREQ2,"sp:unit",SCHUNIT,FARY)
+ . D ADD^C0XF2N(C0SGRF,DSUBJ,"rdf:type","sp:CodedValue",FARY)
+ . D ADD^C0XF2N(C0SGRF,DSUBJ,"sp:code","rxnorm:"_RXNORM,FARY)
+ . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"rdf:type","sp:Code",FARY)
+ . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"dcterms:title",DNAME,FARY)
+ . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"sp:system","rxnorm:",FARY)
+ . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"dcterms:identifier",RXNORM,FARY)
+ . D ADD^C0XF2N(C0SGRF,DSUBJ,"dcterms:title",DNAME,FARY)
+ . D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:startDate",SDATE,FARY)
+ . D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"rdf:type","http://smartplatforms.org/terms/codes/RxNorm_Semantic",FARY)
+ . D BULKLOAD^C0XF2N(.C0XFDA)
+ . K C0XFDA
+ S GRTN=C0SGRF
+ q
+ ;
+RXNFN() Q 1130590011.001 ; RxNorm Concepts file number
+ ;
+RXCUI(ZVUID) ; EXTRINSIC WHICH RETURNS THE RXNORM CODE IF KNOWN OF
+ ; THE VUID - RETURNS CODE^SYSTEM^VERSION TO USE IN THE CCR
+ N ZRSLT S ZRSLT=ZVUID_"^"_"VUID"_"^" ; DEFAULT
+ I $G(ZVUID)="" Q ""
+ I '$D(^C0P("RXN")) Q ZRSLT ; ERX NOT INSTALLED
+ N C0PIEN ; S C0PIEN=$$FIND1^DIC($$RXNFN,"","QX",ZVUID,"VUID")
+ S C0PIEN=$O(^C0P("RXN","VUID",ZVUID,"")) ;GPL FIX FOR MULTIPLES
+ N ZRXN S ZRXN=$$GET1^DIQ($$RXNFN,C0PIEN,.01)
+ S ZRXN=$$NISTMAP(ZRXN) ; CHANGE THE CODE IF NEEDED
+ I ZRXN'="" S ZRSLT=ZRXN_"^RXNORM^08AB_081201F"
+ Q ZRSLT
+ ;
+NISTMAP(ZRXN) ; EXTRINSIC WHICH MAPS SOME RXNORM NUMBERS TO
+ ; CONFORM TO NIST REQUIREMENTS
+ ;INPATIENT CERTIFICATION
+ I ZRXN=309362 S ZRXN=213169
+ I ZRXN=855318 S ZRXN=855320
+ I ZRXN=197361 S ZRXN=212549
+ ;OUTPATIENT CERTIFICATION
+ I ZRXN=310534 S ZRXN=205875
+ I ZRXN=617312 S ZRXN=617314
+ I ZRXN=310429 S ZRXN=200801
+ I ZRXN=628953 S ZRXN=628958
+ I ZRXN=745679 S ZRXN=630208
+ I ZRXN=311564 S ZRXN=979334
+ I ZRXN=836343 S ZRXN=836370
+ Q ZRXN
+ ;
Index: smart/trunk/p/C0SMXMLB.m
===================================================================
--- smart/trunk/p/C0SMXMLB.m (revision 1569)
+++ smart/trunk/p/C0SMXMLB.m (revision 1571)
@@ -1,106 +1,106 @@
-MXMLBLD ;;ISF/RWF - Tool to build XML ;07/09/09 16:55 - Smart Container Ver.
- ;;8.0;KERNEL;;;Build 2
- QUIT
- ;
- ;DOC - The top level tag
- ;DOCTYPE - Want to include a DOCTYPE node
- ;FLAG - Set to 'G' to store the output in the global ^TMP("MXMLBLD",$J,
-START(DOC,DOCTYPE,FLAG,NO1ST) ;Call this once at the begining.
- K ^TMP("MXMLBLD",$J)
- S ^TMP("MXMLBLD",$J,"DOC")=DOC,^TMP("MXMLBLD",$J,"STK")=0
- I $G(FLAG)["G" S ^TMP("MXMLBLD",$J,"CNT")=1
- I $G(NO1ST)'=1 D OUTPUT($$XMLHDR)
- D:$L($G(DOCTYPE)) OUTPUT("") D OUTPUT("<"_DOC_">")
- Q
- ;
-END ;Call this once to close out the document
- D OUTPUT("")
- I '$G(^TMP("MXMLBLD",$J,"CNT")) K ^TMP("MXMLBLD",$J)
- K ^TMP("MXMLBLD",$J,"DOC"),^("CNT"),^("STK")
- Q
- ;
-ITEM(INDENT,TAG,ATT,VALUE) ;Output a Item
- N I,X
- S ATT=$G(ATT)
- I '$D(VALUE) D OUTPUT($$BLS($G(INDENT))_"<"_TAG_$$ATT(.ATT)_" />") Q
- D OUTPUT($$BLS($G(INDENT))_"<"_TAG_$$ATT(.ATT)_">"_$$CHARCHK(VALUE)_"")
- Q
- ;DOITEM is a callback to output the lower level.
-MULTI(INDENT,TAG,ATT,DOITEM) ;Output a Multipule
- N I,X,S
- S ATT=$G(ATT)
- D PUSH($G(INDENT),TAG,.ATT)
- D @DOITEM
- D POP
- Q
- ;
-ATT(ATT) ;Output a string of attributes
- I $D(ATT)<9 Q ""
- N I,S,V
- S S="",I=""
- F S I=$O(ATT(I)) Q:I="" S S=S_" "_I_"="_$$Q(ATT(I))
- Q S
- ;
-Q(X) ;Add Quotes - Changed by gpl to use single instead of double quotes 6/11
- ;I X'[$C(34) Q $C(34)_X_$C(34)
- I X'[$C(39) Q $C(39)_X_$C(39)
- ;N Q,Y,I,Z S Q=$C(34),(Y,Z)=""
- N Q,Y,I,Z S Q=$C(39),(Y,Z)=""
- F I=1:1:$L(X,Q)-1 S Y=Y_$P(X,Q,I)_Q_Q
- S Y=Y_$P(X,Q,$L(X,Q))
- ;Q $C(34)_Y_$C(34)
- Q $C(39)_Y_$C(39)
- ;
-XMLHDR() ; -- provides current XML standard header
- Q ""
- ;
-OUTPUT(S) ;Output
- N C S C=$G(^TMP("MXMLBLD",$J,"CNT"))
- I C S ^TMP("MXMLBLD",$J,C)=S,^TMP("MXMLBLD",$J,"CNT")=C+1 Q
- W S,!
- Q
- ;
-CHARCHK(STR) ; -- replace xml character limits with entities
- N A,I,X,Y,Z,NEWSTR
- S (Y,Z)=""
- ;IF STR["&" SET NEWSTR=STR DO SET STR=Y_Z
- ;. FOR X=1:1 SET Y=Y_$PIECE(NEWSTR,"&",X)_"&",Z=$PIECE(STR,"&",X+1,999) QUIT:Z'["&"
- I STR["&" F I=1:1:$L(STR,"&")-1 S STR=$P(STR,"&",1,I)_"&"_$P(STR,"&",I+1,999)
- I STR["<" F S STR=$PIECE(STR,"<",1)_"<"_$PIECE(STR,"<",2,99) Q:STR'["<"
- I STR[">" F S STR=$PIECE(STR,">",1)_">"_$PIECE(STR,">",2,99) Q:STR'[">"
- I STR["'" F S STR=$PIECE(STR,"'",1)_"'"_$PIECE(STR,"'",2,99) Q:STR'["'"
- I STR["""" F S STR=$PIECE(STR,"""",1)_"""_$PIECE(STR,"""",2,99) Q:STR'[""""
- ;
- S STR=$TR(STR,$C(0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31))
- QUIT STR
- ;
-COMMENT(VAL) ;Add Comments
- N I,L
- ;I $D($G(VAL))=1 D OUTPUT("") Q
- I $D(VAL) D OUTPUT("") Q ;CHANGED BY GPL FOR GTM
- S I="",L="")
- Q
- ;
-PUSH(INDENT,TAG,ATT) ;Write a TAG and save.
- N CNT
- S ATT=$G(ATT)
- D OUTPUT($$BLS($G(INDENT))_"<"_TAG_$$ATT(.ATT)_">")
- S CNT=$G(^TMP("MXMLBLD",$J,"STK"))+1,^TMP("MXMLBLD",$J,"STK")=CNT,^TMP("MXMLBLD",$J,"STK",CNT)=INDENT_"^"_TAG
- Q
- ;
-POP ;Write last pushed tag and pop
- N CNT,TAG,INDENT,X
- S CNT=$G(^TMP("MXMLBLD",$J,"STK")),X=^TMP("MXMLBLD",$J,"STK",CNT),^TMP("MXMLBLD",$J,"STK")=CNT-1
- S INDENT=+X,TAG=$P(X,"^",2)
- D OUTPUT($$BLS(INDENT)_"")
- Q
- ;
-BLS(I) ;Return INDENT string
- N S
- S S="",I=$G(I) S:I>0 $P(S," ",I)=" "
- Q S
- ;
-INDENT() ;Renturn indent level
- Q +$G(^TMP("MXMLBLD",$J,"STK"))
+MXMLBLD ;;ISF/RWF - Tool to build XML ;07/09/09 16:55 - Smart Container Ver.
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ QUIT
+ ;
+ ;DOC - The top level tag
+ ;DOCTYPE - Want to include a DOCTYPE node
+ ;FLAG - Set to 'G' to store the output in the global ^TMP("MXMLBLD",$J,
+START(DOC,DOCTYPE,FLAG,NO1ST) ;Call this once at the begining.
+ K ^TMP("MXMLBLD",$J)
+ S ^TMP("MXMLBLD",$J,"DOC")=DOC,^TMP("MXMLBLD",$J,"STK")=0
+ I $G(FLAG)["G" S ^TMP("MXMLBLD",$J,"CNT")=1
+ I $G(NO1ST)'=1 D OUTPUT($$XMLHDR)
+ D:$L($G(DOCTYPE)) OUTPUT("") D OUTPUT("<"_DOC_">")
+ Q
+ ;
+END ;Call this once to close out the document
+ D OUTPUT("")
+ I '$G(^TMP("MXMLBLD",$J,"CNT")) K ^TMP("MXMLBLD",$J)
+ K ^TMP("MXMLBLD",$J,"DOC"),^("CNT"),^("STK")
+ Q
+ ;
+ITEM(INDENT,TAG,ATT,VALUE) ;Output a Item
+ N I,X
+ S ATT=$G(ATT)
+ I '$D(VALUE) D OUTPUT($$BLS($G(INDENT))_"<"_TAG_$$ATT(.ATT)_" />") Q
+ D OUTPUT($$BLS($G(INDENT))_"<"_TAG_$$ATT(.ATT)_">"_$$CHARCHK(VALUE)_"")
+ Q
+ ;DOITEM is a callback to output the lower level.
+MULTI(INDENT,TAG,ATT,DOITEM) ;Output a Multipule
+ N I,X,S
+ S ATT=$G(ATT)
+ D PUSH($G(INDENT),TAG,.ATT)
+ D @DOITEM
+ D POP
+ Q
+ ;
+ATT(ATT) ;Output a string of attributes
+ I $D(ATT)<9 Q ""
+ N I,S,V
+ S S="",I=""
+ F S I=$O(ATT(I)) Q:I="" S S=S_" "_I_"="_$$Q(ATT(I))
+ Q S
+ ;
+Q(X) ;Add Quotes - Changed by gpl to use single instead of double quotes 6/11
+ ;I X'[$C(34) Q $C(34)_X_$C(34)
+ I X'[$C(39) Q $C(39)_X_$C(39)
+ ;N Q,Y,I,Z S Q=$C(34),(Y,Z)=""
+ N Q,Y,I,Z S Q=$C(39),(Y,Z)=""
+ F I=1:1:$L(X,Q)-1 S Y=Y_$P(X,Q,I)_Q_Q
+ S Y=Y_$P(X,Q,$L(X,Q))
+ ;Q $C(34)_Y_$C(34)
+ Q $C(39)_Y_$C(39)
+ ;
+XMLHDR() ; -- provides current XML standard header
+ Q ""
+ ;
+OUTPUT(S) ;Output
+ N C S C=$G(^TMP("MXMLBLD",$J,"CNT"))
+ I C S ^TMP("MXMLBLD",$J,C)=S,^TMP("MXMLBLD",$J,"CNT")=C+1 Q
+ W S,!
+ Q
+ ;
+CHARCHK(STR) ; -- replace xml character limits with entities
+ N A,I,X,Y,Z,NEWSTR
+ S (Y,Z)=""
+ ;IF STR["&" SET NEWSTR=STR DO SET STR=Y_Z
+ ;. FOR X=1:1 SET Y=Y_$PIECE(NEWSTR,"&",X)_"&",Z=$PIECE(STR,"&",X+1,999) QUIT:Z'["&"
+ I STR["&" F I=1:1:$L(STR,"&")-1 S STR=$P(STR,"&",1,I)_"&"_$P(STR,"&",I+1,999)
+ I STR["<" F S STR=$PIECE(STR,"<",1)_"<"_$PIECE(STR,"<",2,99) Q:STR'["<"
+ I STR[">" F S STR=$PIECE(STR,">",1)_">"_$PIECE(STR,">",2,99) Q:STR'[">"
+ I STR["'" F S STR=$PIECE(STR,"'",1)_"'"_$PIECE(STR,"'",2,99) Q:STR'["'"
+ I STR["""" F S STR=$PIECE(STR,"""",1)_"""_$PIECE(STR,"""",2,99) Q:STR'[""""
+ ;
+ S STR=$TR(STR,$C(0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31))
+ QUIT STR
+ ;
+COMMENT(VAL) ;Add Comments
+ N I,L
+ ;I $D($G(VAL))=1 D OUTPUT("") Q
+ I $D(VAL) D OUTPUT("") Q ;CHANGED BY GPL FOR GTM
+ S I="",L="")
+ Q
+ ;
+PUSH(INDENT,TAG,ATT) ;Write a TAG and save.
+ N CNT
+ S ATT=$G(ATT)
+ D OUTPUT($$BLS($G(INDENT))_"<"_TAG_$$ATT(.ATT)_">")
+ S CNT=$G(^TMP("MXMLBLD",$J,"STK"))+1,^TMP("MXMLBLD",$J,"STK")=CNT,^TMP("MXMLBLD",$J,"STK",CNT)=INDENT_"^"_TAG
+ Q
+ ;
+POP ;Write last pushed tag and pop
+ N CNT,TAG,INDENT,X
+ S CNT=$G(^TMP("MXMLBLD",$J,"STK")),X=^TMP("MXMLBLD",$J,"STK",CNT),^TMP("MXMLBLD",$J,"STK")=CNT-1
+ S INDENT=+X,TAG=$P(X,"^",2)
+ D OUTPUT($$BLS(INDENT)_"")
+ Q
+ ;
+BLS(I) ;Return INDENT string
+ N S
+ S S="",I=$G(I) S:I>0 $P(S," ",I)=" "
+ Q S
+ ;
+INDENT() ;Renturn indent level
+ Q +$G(^TMP("MXMLBLD",$J,"STK"))
Index: smart/trunk/p/C0SNHIN.m
===================================================================
--- smart/trunk/p/C0SNHIN.m (revision 1569)
+++ smart/trunk/p/C0SNHIN.m (revision 1571)
@@ -1,324 +1,324 @@
-C0SNHIN ; GPL - Smart Container - OUTPUT OF NHINV ROUTINES;6/3/11 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
- ;Copyright 2011-2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- Q
-EN(ZRTN,ZDFN,ZPART,KEEP) ; GENERATE AN NHIN ARRAY FOR A PATIENT
- ;
- K GARY,GNARY,GIDX,C0SDOCID
- K ZRTN
- N GN
- K ^TMP("NHINV",$J) ; CLEAN UP FROM LAST CALL
- K ^TMP("MXMLDOM",$J) ; CLEAN UP DOM
- K ^TMP("MXMLERR",$J) ; CLEAN UP MXML ERRORS
- D GET^C0SNHINV(.GN,ZDFN,ZPART) ; CALL NHINV ROUTINES TO PULL XML
- S GN=$P(GN,")",1)_")" ; CUT OFF THE REST OF LINE PROTOCOL
- S C0SDOCID=$$PARSE(GN,"NHINARRAY") ; PARSE WITH MXML
- D DOMO^C0SDOM(C0SDOCID,"/","ZRTN","GIDX","GARY",,"/results/") ; BLD ARRAYS
- I '$G(KEEP) K GIDX,GARY ; GET RID OF THE ARRAYS UNLESS KEEP=1
- ;D PROCESS("ZRTN",GN,"/result/",$G(KEEP))
- Q
- ;
-PQRI(ZOUT,KEEP) ; RETURN THE NHIN ARRAY FOR THE PQRI XML TEMPLATE
- ;
- N ZG
- S ZG=$NA(^TMP("PQRIXML",$J))
- K @ZG
- D GETXML^C0SMXP(ZG,"PQRIXML") ; GET THE XML FROM C0S MISC XML
- N C0SDOCID
- S C0SDOCID=$$PARSE^C0SDOM(ZG,"PQRIXML") ; PARSE THE XML
- D DOMO^C0SDOM(C0SDOCID,"/","ZOUT","GIDX","GARY",,"//submission") ; BLD ARRAYS
- I '$G(KEEP) K GIDX,GARY ; GET RID OF THE ARRAYS UNLESS KEEP=1
- Q
- ;
-PQRI2(ZRTN) ; RETURN THE NHIN ARRAY FOR PQRI ONE MEASURE
- ;
- ;N GG
- D GETXML^C0SMXP("GG","PQRI ONE MEASURE")
- D PROCESS(ZRTN,"GG","root",1)
- Q
- ;
-PROCESS(ZRSLT,ZXML,ZREDUCE,KEEP) ; PARSE AND RUN DOMO ON XML
- ; ZRTN IS PASSED BY REFERENCE
- ; ZXML IS PASSED BY NAME
- ; IF KEEP IS 1, GARY AND GIDX ARE NOT KILLED
- ;
- N GN
- S GN=$NA(^TMP("C0SPROCESS",$J))
- K @GN
- M @GN=@ZXML
- S C0SDOCID=$$PARSE(GN,"NHINARRAY") ; PARSE WITH MXML
- K @GN
- D DOMO^C0SDOM(C0SDOCID,"/","ZRSLT","GIDX","GARY",,$G(ZREDUCE)) ; BLD ARRAYS
- I '$G(KEEP) K GIDX,GARY ; GET RID OF THE ARRAYS UNLESS KEEP=1
- Q
- ;
-LOADSMRT ;
- ;
- K ^GPL("SMART")
- S GN=$NA(^GPL("SMART",1))
- I $$FTG^%ZISH("/home/george/","alex-lewis2.xml",GN,2) W !,"SMART FILE LOADED"
- Q
- ;
-SMART ; TRY IT WITH SMART
- ;
- S GN=$NA(^GPL("SMART"))
- ;K ^TMP("MXMLDOM",$J)
- K ^TMP("MXMLERR",$J)
- S C0SDOCID=$$PARSE(GN,"SMART")
- D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"//rdf:RDF/")
- ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
- Q
- ;
-CCR ; TRY IT WITH A CCR
- ;
- S GN=$NA(^GPL("CCR"))
- ;K ^TMP("MXMLDOM",$J)
- K ^TMP("MXMLERR",$J)
- S C0SDOCID=$$PARSE(GN,"CCR")
- D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"//ContinuityOfCareRecord/Body/")
- ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
- Q
- ;
-MED ; TRY IT WITH A CCR MED SECTION
- ;
- S GN=$NA(^GPL("MED"))
- K ^TMP("MXMLDOM",$J)
- K ^TMP("MXMLERR",$J)
- S C0SDOCID=$$PARSE(GN,"MED")
- D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"//Medications/")
- ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
- Q
- ;
-CCD ; TRY IT WITH A CCD
- ;
- S GN=$NA(^GPL("CCD"))
- ;K ^TMP("MXMLDOM",$J)
- K ^TMP("MXMLERR",$J)
- S C0SDOCID=$$PARSE(GN,"CCD")
- D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"//ClinicalDocument/component/structuredBody/")
- ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
- Q
- ;
-TEST1 ; TEST NHINV OUTPUT IN ^GPL("NIHIN")
- ; PARSED WITH MXML
- ; RUN THROUGH XPATH
- K GARY,GIDX,C0SDOCID
- S GN=$NA(^GPL("NHIN"))
- ;S GN=$NA(^GPL("DOMI"))
- S C0SDOCID=$$PARSE(GN,"GPLTEST")
- D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"/results/")
- K ^GPL("GNARY")
- M ^GPL("GNARY")=GNARY
- Q
- ;
-TEST2 ; PUT GNARY THROUGH DOMI AND STORE XML IN ^GPL("DOMI")
- ;
- S GN=$NA(^GPL("GNARY"))
- S C0SDOCID=$$DOMI^C0SDOM(GN,,"results")
- D OUTXML^C0SDOM("G",C0SDOCID)
- K ^GPL("DOMI")
- M ^GPL("DOMI")=G
- Q
- ;
-TEST3 ; TEST NHINV OUTPUT IN ^GPL("NIHIN")
- ; PARSED WITH MXML
- ; RUN THROUGH XPATH
- K GARY,GIDX,C0SDOCID
- ;S GN=$NA(^GPL("NHIN"))
- S GN=$NA(^GPL("DOMI"))
- S C0SDOCID=$$PARSE(GN,"GPLTEST")
- D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"/results/")
- Q
- ;
-DOMO(ZOID,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; RECURSIVE ROUTINE TO POPULATE
- ; THE XPATH INDEX ZXIDX, PASSED BY NAME
- ; THE XPATH ARRAY XPARY, PASSED BY NAME
- ; ZOID IS THE STARTING OID
- ; ZPATH IS THE STARTING XPATH, USUALLY "/"
- ; ZNUM IS THE MULTIPLE NUMBER [x], USUALLY NULL WHEN ON THE TOP NODE
- ; ZREDUX IS THE XPATH REDUCTION STRING, TAKEN OUT OF EACH XPATH IF PRESENT
- I $G(ZREDUX)="" S ZREDUX=""
- N NEWPATH,NARY ; NEWPATH IS AN XPATH NARY IS AN NHIN MUMPS ARRAY
- N NEWNUM S NEWNUM=""
- I $G(ZNUM)>0 S NEWNUM="["_ZNUM_"]"
- S NEWPATH=ZPATH_"/"_$$TAG(ZOID)_NEWNUM ; CREATE THE XPATH FOR THIS NODE
- I $G(ZREDUX)'="" D ; REDUX PROVIDED?
- . N GT S GT=$P(NEWPATH,ZREDUX,2)
- . I GT'="" S NEWPATH=GT
- S @ZXIDX@(NEWPATH)=ZOID ; ADD THE XPATH FOR THIS NODE TO THE XPATH INDEX
- N GA D ATT("GA",ZOID) ; GET ATTRIBUTES FOR THIS NODE
- I $D(GA) D ; PROCESS THE ATTRIBUTES
- . N ZI S ZI=""
- . F S ZI=$O(GA(ZI)) Q:ZI="" D ; FOR EACH ATTRIBUTE
- . . N ZP S ZP=NEWPATH_"/"_ZI ; PATH FOR ATTRIBUTE
- . . S @ZXPARY@(ZP)=GA(ZI) ; ADD THE ATTRIBUTE XPATH TO THE XP ARRAY
- . . I GA(ZI)'="" D ADDNARY(ZP,GA(ZI)) ; ADD THE NHIN ARRAY VALUE
- N GD D DATA("GD",ZOID) ; SEE IF THERE IS DATA FOR THIS NODE
- I $D(GD(2)) D ;
- . M @ZXPARY@(NEWPATH)=GD ; IF MULITPLE DATA MERGE TO THE ARRAY
- E I $D(GD(1)) D ;
- . S @ZXPARY@(NEWPATH)=GD(1) ; IF SINGLE VALUE, ADD TO ARRAY
- . I GD(1)'="" D ADDNARY(NEWPATH,GD(1)) ; ADD TO NHIN ARRAY
- N ZFRST S ZFRST=$$FIRST(ZOID) ; SET FIRST CHILD
- I ZFRST'=0 D ; THERE IS A CHILD
- . N ZNUM
- . N ZMULT S ZMULT=$$ISMULT(ZFRST) ; IS FIRST CHILD A MULTIPLE
- . D DOMO(ZFRST,NEWPATH,ZNARY,ZXIDX,ZXPARY,$S(ZMULT:1,1:""),ZREDUX) ; THE CHILD
- N GNXT S GNXT=$$NXTSIB(ZOID)
- I $$TAG(GNXT)'=$$TAG(ZOID) S ZNUM="" ; RESET COUNTING AFTER MULTIPLES
- I GNXT'=0 D ;
- . N ZMULT S ZMULT=$$ISMULT(GNXT) ; IS THE SIBLING A MULTIPLE?
- . I (ZNUM="")&(ZMULT) D ; SIBLING IS FIRST OF MULTIPLES
- . . N ZNUM S ZNUM=1 ;
- . . D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; DO NEXT SIB
- . E D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,$S(ZNUM>0:ZNUM+1,1:""),ZREDUX) ; SIB
- Q
- ;
-ADDNARY(ZXP,ZVALUE) ; ADD AN NHIN ARRAY VALUE TO ZNARY
- ;
- N ZZI,ZZJ,ZZN
- S ZZI=$P(ZXP,"/",1) ; FIRST PIECE OF XPATH ARRAY
- I ZZI="" Q ; DON'T ADD THIS ONE .. PROBABLY THE //results NODE
- S ZZJ=$P(ZXP,ZZI_"/",2) ; REST OF XPATH ARRAY
- S ZZJ=$TR(ZZJ,"/",".") ; REPLACE / WITH .
- I ZZI'["]" D ; A SINGLETON
- . S ZZN=1
- E D ; THERE IS AN [x] OCCURANCE
- . S ZZN=$P($P(ZZI,"[",2),"]",1) ; PULL OUT THE OCCURANCE
- . S ZZI=$P(ZZI,"[",1) ; TAKE OUT THE [X]
- I ZZJ'="" S @ZNARY@(ZZI,ZZN,ZZJ)=ZVALUE
- Q
- ;
-PARSE(INXML,INDOC) ;CALL THE MXML PARSER ON INXML, PASSED BY NAME
- ; INDOC IS PASSED AS THE DOCUMENT NAME - DON'T KNOW WHERE TO STORE THIS NOW
- ; EXTRINSIC WHICH RETURNS THE DOCID ASSIGNED BY MXML
- ;Q $$EN^MXMLDOM(INXML)
- Q $$EN^MXMLDOM(INXML,"W")
- ;
-ISMULT(ZOID) ; RETURN TRUE IF ZOID IS ONE OF A MULTIPLE
- N ZN
- ;I $$TAG(ZOID)["entry" B
- S ZN=$$NXTSIB(ZOID)
- I ZN'="" Q $$TAG(ZOID)=$$TAG(ZN) ; IF TAG IS THE SAME AS NEXT SIB TAG
- Q 0
- ;
-FIRST(ZOID) ;RETURNS THE OID OF THE FIRST CHILD OF ZOID
- Q $$CHILD^MXMLDOM(C0SDOCID,ZOID)
- ;
-PARENT(ZOID) ;RETURNS THE OID OF THE PARENT OF ZOID
- Q $$PARENT^MXMLDOM(C0SDOCID,ZOID)
- ;
-ATT(RTN,NODE) ;GET ATTRIBUTES FOR ZOID
- S HANDLE=C0SDOCID
- K @RTN
- D GETTXT^MXMLDOM("A")
- Q
- ;
-TAG(ZOID) ; RETURNS THE XML TAG FOR THE NODE
- ;I ZOID=149 B ;GPLTEST
- N X,Y
- S Y=""
- S X=$G(C0SCBK("TAG")) ;IS THERE A CALLBACK FOR THIS ROUTINE
- I X'="" X X ; EXECUTE THE CALLBACK, SHOULD SET Y
- I Y="" S Y=$$NAME^MXMLDOM(C0SDOCID,ZOID)
- Q Y
- ;
-NXTSIB(ZOID) ; RETURNS THE NEXT SIBLING
- Q $$SIBLING^MXMLDOM(C0SDOCID,ZOID)
- ;
-DATA(ZT,ZOID) ; RETURNS DATA FOR THE NODE
- ;N ZT,ZN S ZT=""
- ;S C0SDOM=$NA(^TMP("MXMLDOM",$J,C0SDOCID))
- ;Q $G(@C0SDOM@(ZOID,"T",1))
- S ZN=$$TEXT^MXMLDOM(C0SDOCID,ZOID,ZT)
- Q
- ;
-OUTXML(ZRTN,INID) ; USES C0SMXMLB (MXMLBLD) TO OUTPUT XML FROM AN MXMLDOM
- ;
- S C0SDOCID=INID
- D START^C0SMXMLB($$TAG(1),,"G")
- D NDOUT($$FIRST(1))
- D END^C0SMXMLB ;END THE DOCUMENT
- M @ZRTN=^TMP("MXMLBLD",$J)
- K ^TMP("MXMLBLD",$J)
- Q
- ;
-NDOUT(ZOID) ;CALLBACK ROUTINE - IT IS RECURSIVE
- N ZI S ZI=$$FIRST(ZOID)
- I ZI'=0 D ; THERE IS A CHILD
- . N ZATT D ATT("ZATT",ZOID) ; THESE ARE THE ATTRIBUTES MOVED TO ZATT
- . D MULTI^C0SMXMLB("",$$TAG(ZOID),.ZATT,"NDOUT^C0SMXML(ZI)") ;HAVE CHILDREN
- E D ; NO CHILD - IF NO CHILDREN, A NODE HAS DATA, IS AN ENDPOINT
- . ;W "DOING",ZOID,!
- . N ZD D DATA("ZD",ZOID) ;NODES WITHOUT CHILDREN HAVE DATA
- . N ZATT D ATT("ZATT",ZOID) ;ATTRIBUTES
- . D ITEM^C0SMXMLB("",$$TAG(ZOID),.ZATT,$G(ZD(1))) ;NO CHILDREN
- I $$NXTSIB(ZOID)'=0 D ; THERE IS A SIBLING
- . D NDOUT($$NXTSIB(ZOID)) ;RECURSE FOR SIBLINGS
- Q
- ;
-WNHIN(ZDFN) ; WRITES THE XML OUTPUT OF GET^NHINV TO AN XML FILE
- ;
- N GN,GN2
- D GET^NHINV(.GN,ZDFN) ; EXTRACT THE XML
- S GN2=$NA(@GN@(1))
- W $$OUTPUT^C0SXPATH(GN2,"nhin_"_ZDFN_".xml","/home/wvehr3-09/")
- Q
- ;
-TESTNARY ; TEST MAKING A NHIN ARRAY
- N ZI S ZI=""
- N ZH ; DOM HANDLE
- D TEST1 ; PARSE AN NHIN RESULT INTO THE DOM
- S ZH=C0SDOCID ; SET THE HANDLE
- N ZD S ZD=$NA(^TMP("MXMLDOM",$J,ZH))
- F S ZI=$O(@ZD@(ZI)) Q:ZI="" D ; FOR EACH NODE
- . N ZATT
- . D MNARY(.ZATT,ZH,ZI)
- . N ZPRE,ZN
- . S ZPRE=$$PRE(ZI)
- . S ZN=$P(ZPRE,",",2)
- . S ZPRE=$P(ZPRE,",",1)
- . ;I $D(ZATT) ZWR ZATT
- . N ZJ S ZJ=""
- . F S ZJ=$O(ZATT(ZJ)) Q:ZJ="" D ; FOR EACH ATTRIBUTE
- . . W ZPRE_"["_ZN_"]"_$$TAG(ZI)_"."_ZJ_"="_ZATT(ZJ),!
- . . S GOUT(ZPRE,ZN,$$TAG(ZI)_"."_ZJ)=ZATT(ZJ)
- Q
- ;
-PRE(ZNODE) ; EXTRINSIC WHICH RETURNS THE PREFIX FOR A NODE
- ;
- N GI,GI2,GPT,GJ,GN
- S GI=$$PARENT(ZNODE) ; PARENT NODE
- I GI=0 Q "" ; NO PARENT
- S GPT=$$TAG(GI) ; TAG OF PARENT
- S GI2=$$PARENT(GI) ; PARENT OF PARENT
- I (GI2'=0)&($$TAG(GI2)'="results") S GPT=$$TAG(GI2)_"."_GPT
- S GJ=$$FIRST(GI) ; NODE OF FIRST SIB
- I GJ=ZNODE Q:$$TAG(GI)_",1"
- F GN=2:1 Q:GJ=ZNODE D ;
- . S GJ=$$NXTSIB(GJ) ; NEXT SIBLING
- Q GPT_","_GN
- ;
-MNARY(ZRTN,ZHANDLE,ZOID) ; MAKE A NHIN ARRAY FROM A DOM NODE
- ; RETURNED IN ZRTN, PASSED BY REFERENCE
- ; ZHANDLE IS THE DOM DOCUMENT ID
- ; ZOID IS THE DOM NODE
- D ATT("ZRTN",ZOID)
- Q
- ;
+C0SNHIN ; GPL - Smart Container - OUTPUT OF NHINV ROUTINES;6/3/11 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2011-2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ Q
+EN(ZRTN,ZDFN,ZPART,KEEP) ; GENERATE AN NHIN ARRAY FOR A PATIENT
+ ;
+ K GARY,GNARY,GIDX,C0SDOCID
+ K ZRTN
+ N GN
+ K ^TMP("NHINV",$J) ; CLEAN UP FROM LAST CALL
+ K ^TMP("MXMLDOM",$J) ; CLEAN UP DOM
+ K ^TMP("MXMLERR",$J) ; CLEAN UP MXML ERRORS
+ D GET^C0SNHINV(.GN,ZDFN,ZPART) ; CALL NHINV ROUTINES TO PULL XML
+ S GN=$P(GN,")",1)_")" ; CUT OFF THE REST OF LINE PROTOCOL
+ S C0SDOCID=$$PARSE(GN,"NHINARRAY") ; PARSE WITH MXML
+ D DOMO^C0SDOM(C0SDOCID,"/","ZRTN","GIDX","GARY",,"/results/") ; BLD ARRAYS
+ I '$G(KEEP) K GIDX,GARY ; GET RID OF THE ARRAYS UNLESS KEEP=1
+ ;D PROCESS("ZRTN",GN,"/result/",$G(KEEP))
+ Q
+ ;
+PQRI(ZOUT,KEEP) ; RETURN THE NHIN ARRAY FOR THE PQRI XML TEMPLATE
+ ;
+ N ZG
+ S ZG=$NA(^TMP("PQRIXML",$J))
+ K @ZG
+ D GETXML^C0SMXP(ZG,"PQRIXML") ; GET THE XML FROM C0S MISC XML
+ N C0SDOCID
+ S C0SDOCID=$$PARSE^C0SDOM(ZG,"PQRIXML") ; PARSE THE XML
+ D DOMO^C0SDOM(C0SDOCID,"/","ZOUT","GIDX","GARY",,"//submission") ; BLD ARRAYS
+ I '$G(KEEP) K GIDX,GARY ; GET RID OF THE ARRAYS UNLESS KEEP=1
+ Q
+ ;
+PQRI2(ZRTN) ; RETURN THE NHIN ARRAY FOR PQRI ONE MEASURE
+ ;
+ ;N GG
+ D GETXML^C0SMXP("GG","PQRI ONE MEASURE")
+ D PROCESS(ZRTN,"GG","root",1)
+ Q
+ ;
+PROCESS(ZRSLT,ZXML,ZREDUCE,KEEP) ; PARSE AND RUN DOMO ON XML
+ ; ZRTN IS PASSED BY REFERENCE
+ ; ZXML IS PASSED BY NAME
+ ; IF KEEP IS 1, GARY AND GIDX ARE NOT KILLED
+ ;
+ N GN
+ S GN=$NA(^TMP("C0SPROCESS",$J))
+ K @GN
+ M @GN=@ZXML
+ S C0SDOCID=$$PARSE(GN,"NHINARRAY") ; PARSE WITH MXML
+ K @GN
+ D DOMO^C0SDOM(C0SDOCID,"/","ZRSLT","GIDX","GARY",,$G(ZREDUCE)) ; BLD ARRAYS
+ I '$G(KEEP) K GIDX,GARY ; GET RID OF THE ARRAYS UNLESS KEEP=1
+ Q
+ ;
+LOADSMRT ;
+ ;
+ K ^GPL("SMART")
+ S GN=$NA(^GPL("SMART",1))
+ I $$FTG^%ZISH("/home/george/","alex-lewis2.xml",GN,2) W !,"SMART FILE LOADED"
+ Q
+ ;
+SMART ; TRY IT WITH SMART
+ ;
+ S GN=$NA(^GPL("SMART"))
+ ;K ^TMP("MXMLDOM",$J)
+ K ^TMP("MXMLERR",$J)
+ S C0SDOCID=$$PARSE(GN,"SMART")
+ D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"//rdf:RDF/")
+ ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
+ Q
+ ;
+CCR ; TRY IT WITH A CCR
+ ;
+ S GN=$NA(^GPL("CCR"))
+ ;K ^TMP("MXMLDOM",$J)
+ K ^TMP("MXMLERR",$J)
+ S C0SDOCID=$$PARSE(GN,"CCR")
+ D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"//ContinuityOfCareRecord/Body/")
+ ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
+ Q
+ ;
+MED ; TRY IT WITH A CCR MED SECTION
+ ;
+ S GN=$NA(^GPL("MED"))
+ K ^TMP("MXMLDOM",$J)
+ K ^TMP("MXMLERR",$J)
+ S C0SDOCID=$$PARSE(GN,"MED")
+ D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"//Medications/")
+ ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
+ Q
+ ;
+CCD ; TRY IT WITH A CCD
+ ;
+ S GN=$NA(^GPL("CCD"))
+ ;K ^TMP("MXMLDOM",$J)
+ K ^TMP("MXMLERR",$J)
+ S C0SDOCID=$$PARSE(GN,"CCD")
+ D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"//ClinicalDocument/component/structuredBody/")
+ ;K ^TMP("MXMLDOM",$J) ;CLEAN UP... IT'S BIG
+ Q
+ ;
+TEST1 ; TEST NHINV OUTPUT IN ^GPL("NIHIN")
+ ; PARSED WITH MXML
+ ; RUN THROUGH XPATH
+ K GARY,GIDX,C0SDOCID
+ S GN=$NA(^GPL("NHIN"))
+ ;S GN=$NA(^GPL("DOMI"))
+ S C0SDOCID=$$PARSE(GN,"GPLTEST")
+ D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"/results/")
+ K ^GPL("GNARY")
+ M ^GPL("GNARY")=GNARY
+ Q
+ ;
+TEST2 ; PUT GNARY THROUGH DOMI AND STORE XML IN ^GPL("DOMI")
+ ;
+ S GN=$NA(^GPL("GNARY"))
+ S C0SDOCID=$$DOMI^C0SDOM(GN,,"results")
+ D OUTXML^C0SDOM("G",C0SDOCID)
+ K ^GPL("DOMI")
+ M ^GPL("DOMI")=G
+ Q
+ ;
+TEST3 ; TEST NHINV OUTPUT IN ^GPL("NIHIN")
+ ; PARSED WITH MXML
+ ; RUN THROUGH XPATH
+ K GARY,GIDX,C0SDOCID
+ ;S GN=$NA(^GPL("NHIN"))
+ S GN=$NA(^GPL("DOMI"))
+ S C0SDOCID=$$PARSE(GN,"GPLTEST")
+ D DOMO^C0SDOM(C0SDOCID,"/","GNARY","GIDX","GARY",,"/results/")
+ Q
+ ;
+DOMO(ZOID,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; RECURSIVE ROUTINE TO POPULATE
+ ; THE XPATH INDEX ZXIDX, PASSED BY NAME
+ ; THE XPATH ARRAY XPARY, PASSED BY NAME
+ ; ZOID IS THE STARTING OID
+ ; ZPATH IS THE STARTING XPATH, USUALLY "/"
+ ; ZNUM IS THE MULTIPLE NUMBER [x], USUALLY NULL WHEN ON THE TOP NODE
+ ; ZREDUX IS THE XPATH REDUCTION STRING, TAKEN OUT OF EACH XPATH IF PRESENT
+ I $G(ZREDUX)="" S ZREDUX=""
+ N NEWPATH,NARY ; NEWPATH IS AN XPATH NARY IS AN NHIN MUMPS ARRAY
+ N NEWNUM S NEWNUM=""
+ I $G(ZNUM)>0 S NEWNUM="["_ZNUM_"]"
+ S NEWPATH=ZPATH_"/"_$$TAG(ZOID)_NEWNUM ; CREATE THE XPATH FOR THIS NODE
+ I $G(ZREDUX)'="" D ; REDUX PROVIDED?
+ . N GT S GT=$P(NEWPATH,ZREDUX,2)
+ . I GT'="" S NEWPATH=GT
+ S @ZXIDX@(NEWPATH)=ZOID ; ADD THE XPATH FOR THIS NODE TO THE XPATH INDEX
+ N GA D ATT("GA",ZOID) ; GET ATTRIBUTES FOR THIS NODE
+ I $D(GA) D ; PROCESS THE ATTRIBUTES
+ . N ZI S ZI=""
+ . F S ZI=$O(GA(ZI)) Q:ZI="" D ; FOR EACH ATTRIBUTE
+ . . N ZP S ZP=NEWPATH_"/"_ZI ; PATH FOR ATTRIBUTE
+ . . S @ZXPARY@(ZP)=GA(ZI) ; ADD THE ATTRIBUTE XPATH TO THE XP ARRAY
+ . . I GA(ZI)'="" D ADDNARY(ZP,GA(ZI)) ; ADD THE NHIN ARRAY VALUE
+ N GD D DATA("GD",ZOID) ; SEE IF THERE IS DATA FOR THIS NODE
+ I $D(GD(2)) D ;
+ . M @ZXPARY@(NEWPATH)=GD ; IF MULITPLE DATA MERGE TO THE ARRAY
+ E I $D(GD(1)) D ;
+ . S @ZXPARY@(NEWPATH)=GD(1) ; IF SINGLE VALUE, ADD TO ARRAY
+ . I GD(1)'="" D ADDNARY(NEWPATH,GD(1)) ; ADD TO NHIN ARRAY
+ N ZFRST S ZFRST=$$FIRST(ZOID) ; SET FIRST CHILD
+ I ZFRST'=0 D ; THERE IS A CHILD
+ . N ZNUM
+ . N ZMULT S ZMULT=$$ISMULT(ZFRST) ; IS FIRST CHILD A MULTIPLE
+ . D DOMO(ZFRST,NEWPATH,ZNARY,ZXIDX,ZXPARY,$S(ZMULT:1,1:""),ZREDUX) ; THE CHILD
+ N GNXT S GNXT=$$NXTSIB(ZOID)
+ I $$TAG(GNXT)'=$$TAG(ZOID) S ZNUM="" ; RESET COUNTING AFTER MULTIPLES
+ I GNXT'=0 D ;
+ . N ZMULT S ZMULT=$$ISMULT(GNXT) ; IS THE SIBLING A MULTIPLE?
+ . I (ZNUM="")&(ZMULT) D ; SIBLING IS FIRST OF MULTIPLES
+ . . N ZNUM S ZNUM=1 ;
+ . . D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; DO NEXT SIB
+ . E D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,$S(ZNUM>0:ZNUM+1,1:""),ZREDUX) ; SIB
+ Q
+ ;
+ADDNARY(ZXP,ZVALUE) ; ADD AN NHIN ARRAY VALUE TO ZNARY
+ ;
+ N ZZI,ZZJ,ZZN
+ S ZZI=$P(ZXP,"/",1) ; FIRST PIECE OF XPATH ARRAY
+ I ZZI="" Q ; DON'T ADD THIS ONE .. PROBABLY THE //results NODE
+ S ZZJ=$P(ZXP,ZZI_"/",2) ; REST OF XPATH ARRAY
+ S ZZJ=$TR(ZZJ,"/",".") ; REPLACE / WITH .
+ I ZZI'["]" D ; A SINGLETON
+ . S ZZN=1
+ E D ; THERE IS AN [x] OCCURANCE
+ . S ZZN=$P($P(ZZI,"[",2),"]",1) ; PULL OUT THE OCCURANCE
+ . S ZZI=$P(ZZI,"[",1) ; TAKE OUT THE [X]
+ I ZZJ'="" S @ZNARY@(ZZI,ZZN,ZZJ)=ZVALUE
+ Q
+ ;
+PARSE(INXML,INDOC) ;CALL THE MXML PARSER ON INXML, PASSED BY NAME
+ ; INDOC IS PASSED AS THE DOCUMENT NAME - DON'T KNOW WHERE TO STORE THIS NOW
+ ; EXTRINSIC WHICH RETURNS THE DOCID ASSIGNED BY MXML
+ ;Q $$EN^MXMLDOM(INXML)
+ Q $$EN^MXMLDOM(INXML,"W")
+ ;
+ISMULT(ZOID) ; RETURN TRUE IF ZOID IS ONE OF A MULTIPLE
+ N ZN
+ ;I $$TAG(ZOID)["entry" B
+ S ZN=$$NXTSIB(ZOID)
+ I ZN'="" Q $$TAG(ZOID)=$$TAG(ZN) ; IF TAG IS THE SAME AS NEXT SIB TAG
+ Q 0
+ ;
+FIRST(ZOID) ;RETURNS THE OID OF THE FIRST CHILD OF ZOID
+ Q $$CHILD^MXMLDOM(C0SDOCID,ZOID)
+ ;
+PARENT(ZOID) ;RETURNS THE OID OF THE PARENT OF ZOID
+ Q $$PARENT^MXMLDOM(C0SDOCID,ZOID)
+ ;
+ATT(RTN,NODE) ;GET ATTRIBUTES FOR ZOID
+ S HANDLE=C0SDOCID
+ K @RTN
+ D GETTXT^MXMLDOM("A")
+ Q
+ ;
+TAG(ZOID) ; RETURNS THE XML TAG FOR THE NODE
+ ;I ZOID=149 B ;GPLTEST
+ N X,Y
+ S Y=""
+ S X=$G(C0SCBK("TAG")) ;IS THERE A CALLBACK FOR THIS ROUTINE
+ I X'="" X X ; EXECUTE THE CALLBACK, SHOULD SET Y
+ I Y="" S Y=$$NAME^MXMLDOM(C0SDOCID,ZOID)
+ Q Y
+ ;
+NXTSIB(ZOID) ; RETURNS THE NEXT SIBLING
+ Q $$SIBLING^MXMLDOM(C0SDOCID,ZOID)
+ ;
+DATA(ZT,ZOID) ; RETURNS DATA FOR THE NODE
+ ;N ZT,ZN S ZT=""
+ ;S C0SDOM=$NA(^TMP("MXMLDOM",$J,C0SDOCID))
+ ;Q $G(@C0SDOM@(ZOID,"T",1))
+ S ZN=$$TEXT^MXMLDOM(C0SDOCID,ZOID,ZT)
+ Q
+ ;
+OUTXML(ZRTN,INID) ; USES C0SMXMLB (MXMLBLD) TO OUTPUT XML FROM AN MXMLDOM
+ ;
+ S C0SDOCID=INID
+ D START^C0SMXMLB($$TAG(1),,"G")
+ D NDOUT($$FIRST(1))
+ D END^C0SMXMLB ;END THE DOCUMENT
+ M @ZRTN=^TMP("MXMLBLD",$J)
+ K ^TMP("MXMLBLD",$J)
+ Q
+ ;
+NDOUT(ZOID) ;CALLBACK ROUTINE - IT IS RECURSIVE
+ N ZI S ZI=$$FIRST(ZOID)
+ I ZI'=0 D ; THERE IS A CHILD
+ . N ZATT D ATT("ZATT",ZOID) ; THESE ARE THE ATTRIBUTES MOVED TO ZATT
+ . D MULTI^C0SMXMLB("",$$TAG(ZOID),.ZATT,"NDOUT^C0SMXML(ZI)") ;HAVE CHILDREN
+ E D ; NO CHILD - IF NO CHILDREN, A NODE HAS DATA, IS AN ENDPOINT
+ . ;W "DOING",ZOID,!
+ . N ZD D DATA("ZD",ZOID) ;NODES WITHOUT CHILDREN HAVE DATA
+ . N ZATT D ATT("ZATT",ZOID) ;ATTRIBUTES
+ . D ITEM^C0SMXMLB("",$$TAG(ZOID),.ZATT,$G(ZD(1))) ;NO CHILDREN
+ I $$NXTSIB(ZOID)'=0 D ; THERE IS A SIBLING
+ . D NDOUT($$NXTSIB(ZOID)) ;RECURSE FOR SIBLINGS
+ Q
+ ;
+WNHIN(ZDFN) ; WRITES THE XML OUTPUT OF GET^NHINV TO AN XML FILE
+ ;
+ N GN,GN2
+ D GET^NHINV(.GN,ZDFN) ; EXTRACT THE XML
+ S GN2=$NA(@GN@(1))
+ W $$OUTPUT^C0SXPATH(GN2,"nhin_"_ZDFN_".xml","/home/wvehr3-09/")
+ Q
+ ;
+TESTNARY ; TEST MAKING A NHIN ARRAY
+ N ZI S ZI=""
+ N ZH ; DOM HANDLE
+ D TEST1 ; PARSE AN NHIN RESULT INTO THE DOM
+ S ZH=C0SDOCID ; SET THE HANDLE
+ N ZD S ZD=$NA(^TMP("MXMLDOM",$J,ZH))
+ F S ZI=$O(@ZD@(ZI)) Q:ZI="" D ; FOR EACH NODE
+ . N ZATT
+ . D MNARY(.ZATT,ZH,ZI)
+ . N ZPRE,ZN
+ . S ZPRE=$$PRE(ZI)
+ . S ZN=$P(ZPRE,",",2)
+ . S ZPRE=$P(ZPRE,",",1)
+ . ;I $D(ZATT) ZWR ZATT
+ . N ZJ S ZJ=""
+ . F S ZJ=$O(ZATT(ZJ)) Q:ZJ="" D ; FOR EACH ATTRIBUTE
+ . . W ZPRE_"["_ZN_"]"_$$TAG(ZI)_"."_ZJ_"="_ZATT(ZJ),!
+ . . S GOUT(ZPRE,ZN,$$TAG(ZI)_"."_ZJ)=ZATT(ZJ)
+ Q
+ ;
+PRE(ZNODE) ; EXTRINSIC WHICH RETURNS THE PREFIX FOR A NODE
+ ;
+ N GI,GI2,GPT,GJ,GN
+ S GI=$$PARENT(ZNODE) ; PARENT NODE
+ I GI=0 Q "" ; NO PARENT
+ S GPT=$$TAG(GI) ; TAG OF PARENT
+ S GI2=$$PARENT(GI) ; PARENT OF PARENT
+ I (GI2'=0)&($$TAG(GI2)'="results") S GPT=$$TAG(GI2)_"."_GPT
+ S GJ=$$FIRST(GI) ; NODE OF FIRST SIB
+ I GJ=ZNODE Q:$$TAG(GI)_",1"
+ F GN=2:1 Q:GJ=ZNODE D ;
+ . S GJ=$$NXTSIB(GJ) ; NEXT SIBLING
+ Q GPT_","_GN
+ ;
+MNARY(ZRTN,ZHANDLE,ZOID) ; MAKE A NHIN ARRAY FROM A DOM NODE
+ ; RETURNED IN ZRTN, PASSED BY REFERENCE
+ ; ZHANDLE IS THE DOM DOCUMENT ID
+ ; ZOID IS THE DOM NODE
+ D ATT("ZRTN",ZOID)
+ Q
+ ;
Index: smart/trunk/p/C0SNHINV.m
===================================================================
--- smart/trunk/p/C0SNHINV.m (revision 1569)
+++ smart/trunk/p/C0SNHINV.m (revision 1571)
@@ -1,118 +1,118 @@
-C0SNHINV ;SLC/MKB - Serve VistA data as XML via RPC - Smart Container Version
- ;;1.0;C0S;**1**;Oct 25, 2010;Build 11
- ;
- ; External References DBIA#
- ; ------------------- -----
- ; ^DPT 10035
- ; ^SC 10040
- ; DIQ 2056
- ; MPIF001 2701
- ; VASITE 10112
- ; XLFDT 10103
- ; XLFSTR 10104
- ; XUAF4 2171
- ;
-GET(NHIN,DFN,TYPE,START,STOP,MAX,ID) ; -- Return search results as XML in @NHIN@(n)
- ; RPC = NHIN GET VISTA DATA
- N ICN,NHINI,NHINTOTL
- S NHIN=$NA(^TMP("NHINV",$J)) K @NHIN
- ;
- ; parse & validate input parameters
- S ICN=+$P(DFN,";",2),DFN=+$G(DFN)
- I 'DFN S DFN=+$$GETDFN^MPIF001(ICN)
- I DFN<1!'$D(^DPT(DFN)) D ERR(1,DFN) G GTQ
- S TYPE=$G(TYPE) I TYPE="" S TYPE=$$ALL
- S:'$G(START) START=1410101 S:'$G(STOP) STOP=9999998 S:'$G(MAX) MAX=9999
- I START,STOP,STOP")
- F NHINP=1:1:$L(NHINTYPE,";") S TYPE=$P(NHINTYPE,";",NHINP) I $L(TYPE) D
- . S RTN="EN^"_$$RTN(TYPE) Q:'$L($T(@RTN)) ;D ERR(2) Q
- . D @(RTN_"(DFN,START,STOP,MAX,ID)")
- D ADD("")
- ;
- I $G(NHINTOTL),$G(@NHIN@(1))="" S @NHIN@(1)=""
- ;
-GTQ ; end
- Q
- ;
-RTN(X) ; -- Return name of NHINVxxx routine for clinical domain X
- S X=$$UP^XLFSTR(X),Y="NHINV"
- I X="ACCESSION" S Y="NHINVLRA"
- I X="ALLERGY" S Y="NHINVART"
- I X="APPOINTMENT" S Y="NHINVAPT"
- ; X="CONSULT" S Y="NHINVCON"
- I X="DOCUMENT" S Y="NHINVTIU"
- I X="IMMUNIZATION" S Y="NHINVIMM"
- I X="LAB" S Y="NHINVLR"
- I X="PANEL" S Y="NHINVLRO"
- I X="MED" S Y="NHINVPS"
- I X="RX" S Y="NHINVPSO"
- ; X="ORDER" S Y="NHINVOR"
- I X="PATIENT" S Y="NHINVPT"
- I X="PROBLEM" S Y="NHINVPL"
- I X="PROCEDURE" S Y="NHINVPRC"
- I X="SURGERY" S Y="NHINVSR"
- I X="VISIT" S Y="NHINVSIT"
- I X="VITAL" S Y="NHINVIT"
- I X="RADIOLOGY" S Y="NHINVRA"
- I X="NEW" S Y="NHINVPR"
- Q Y
- ;
-ALL() ; -- return string for all types of data
- ;Q "patient;allergy;problem;vital;lab;med;immunization;visit;appointment;document;procedure"
- Q "patient;allergy;problem;vital;lab;med;immunization;visit;appointment;procedure"
- ;
-ERR(X,VAL) ; -- return error message
- N MSG S MSG="Error"
- I X=1 S MSG="Patient with dfn '"_$G(VAL)_"' not found"
- I X=2 S MSG="Requested domain type '"_$G(VAL)_"' not recognized"
- I X=99 S MSG="Unknown request"
- ;
- D ADD("")
- D ADD(""_MSG_"")
- D ADD("")
- Q
- ;
-ESC(X) ; -- escape outgoing XML
- ; Q $ZCONVERT(X,"O","HTML") ; uncomment for fastest performance on Cache
- ;
- N I,Y,QOT S QOT=""""
- S Y=$P(X,"&") F I=2:1:$L(X,"&") S Y=Y_"&"_$P(X,"&",I)
- S X=Y,Y=$P(X,"<") F I=2:1:$L(X,"<") S Y=Y_"<"_$P(X,"<",I)
- S X=Y,Y=$P(X,">") F I=2:1:$L(X,">") S Y=Y_">"_$P(X,">",I)
- S X=Y,Y=$P(X,"'") F I=2:1:$L(X,"'") S Y=Y_"'"_$P(X,"'",I)
- S X=Y,Y=$P(X,QOT) F I=2:1:$L(X,QOT) S Y=Y_"""_$P(X,QOT,I)
- Q Y
- ;
-ADD(X) ; Add a line @NHIN@(n)=X
- S NHINI=$G(NHINI)+1
- S @NHIN@(NHINI)=X
- Q
- ;
-STRING(ARRAY) ; -- Return text in ARRAY(n) or ARRAY(n,0) as a string
- N I,X,Y S Y=""
- S I=+$O(ARRAY("")) I I=0 S I=+$O(ARRAY(0))
- S Y=$S($D(ARRAY(I,0)):ARRAY(I,0),1:$G(ARRAY(I)))
- F S I=$O(ARRAY(I)) Q:I<1 D
- . S X=$S($D(ARRAY(I,0)):ARRAY(I,0),1:ARRAY(I))
- . I $E(X)=" " S Y=Y_$C(13,10)_X Q
- . S Y=Y_$S($E(Y,$L(Y))=" ":"",1:" ")_X
- Q Y
- ;
-FAC(X) ; -- return Institution file station# for location X
- N HLOC,FAC,Y0,Y S Y=""
- S HLOC=$G(^SC(+$G(X),0)),FAC=$P(HLOC,U,4) ;Institution ien
- ; Get P:4 via Med Ctr Div, if not directly linked
- I 'FAC,$P(HLOC,U,15) S FAC=$$GET1^DIQ(40.8,+$P(HLOC,U,15)_",",.07,"I")
- S Y0=$S(FAC:$$NS^XUAF4(FAC),1:$P($$SITE^VASITE,U,2,3)) ;name^stn#
- S:$L(Y0) Y=$P(Y0,U,2)_U_$P(Y0,U) ;switch to stn#^name
- I $L(Y),'Y S $P(Y,U)=FAC
- Q Y
- ;
-VUID(IEN,FILE) ; -- Return VUID for item
- Q $$GET1^DIQ(FILE,IEN_",",99.99)
+C0SNHINV ;SLC/MKB - Serve VistA data as XML via RPC - Smart Container Version
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;
+ ; External References DBIA#
+ ; ------------------- -----
+ ; ^DPT 10035
+ ; ^SC 10040
+ ; DIQ 2056
+ ; MPIF001 2701
+ ; VASITE 10112
+ ; XLFDT 10103
+ ; XLFSTR 10104
+ ; XUAF4 2171
+ ;
+GET(NHIN,DFN,TYPE,START,STOP,MAX,ID) ; -- Return search results as XML in @NHIN@(n)
+ ; RPC = NHIN GET VISTA DATA
+ N ICN,NHINI,NHINTOTL
+ S NHIN=$NA(^TMP("NHINV",$J)) K @NHIN
+ ;
+ ; parse & validate input parameters
+ S ICN=+$P(DFN,";",2),DFN=+$G(DFN)
+ I 'DFN S DFN=+$$GETDFN^MPIF001(ICN)
+ I DFN<1!'$D(^DPT(DFN)) D ERR(1,DFN) G GTQ
+ S TYPE=$G(TYPE) I TYPE="" S TYPE=$$ALL
+ S:'$G(START) START=1410101 S:'$G(STOP) STOP=9999998 S:'$G(MAX) MAX=9999
+ I START,STOP,STOP")
+ F NHINP=1:1:$L(NHINTYPE,";") S TYPE=$P(NHINTYPE,";",NHINP) I $L(TYPE) D
+ . S RTN="EN^"_$$RTN(TYPE) Q:'$L($T(@RTN)) ;D ERR(2) Q
+ . D @(RTN_"(DFN,START,STOP,MAX,ID)")
+ D ADD("")
+ ;
+ I $G(NHINTOTL),$G(@NHIN@(1))="" S @NHIN@(1)=""
+ ;
+GTQ ; end
+ Q
+ ;
+RTN(X) ; -- Return name of NHINVxxx routine for clinical domain X
+ S X=$$UP^XLFSTR(X),Y="NHINV"
+ I X="ACCESSION" S Y="NHINVLRA"
+ I X="ALLERGY" S Y="NHINVART"
+ I X="APPOINTMENT" S Y="NHINVAPT"
+ ; X="CONSULT" S Y="NHINVCON"
+ I X="DOCUMENT" S Y="NHINVTIU"
+ I X="IMMUNIZATION" S Y="NHINVIMM"
+ I X="LAB" S Y="NHINVLR"
+ I X="PANEL" S Y="NHINVLRO"
+ I X="MED" S Y="NHINVPS"
+ I X="RX" S Y="NHINVPSO"
+ ; X="ORDER" S Y="NHINVOR"
+ I X="PATIENT" S Y="NHINVPT"
+ I X="PROBLEM" S Y="NHINVPL"
+ I X="PROCEDURE" S Y="NHINVPRC"
+ I X="SURGERY" S Y="NHINVSR"
+ I X="VISIT" S Y="NHINVSIT"
+ I X="VITAL" S Y="NHINVIT"
+ I X="RADIOLOGY" S Y="NHINVRA"
+ I X="NEW" S Y="NHINVPR"
+ Q Y
+ ;
+ALL() ; -- return string for all types of data
+ ;Q "patient;allergy;problem;vital;lab;med;immunization;visit;appointment;document;procedure"
+ Q "patient;allergy;problem;vital;lab;med;immunization;visit;appointment;procedure"
+ ;
+ERR(X,VAL) ; -- return error message
+ N MSG S MSG="Error"
+ I X=1 S MSG="Patient with dfn '"_$G(VAL)_"' not found"
+ I X=2 S MSG="Requested domain type '"_$G(VAL)_"' not recognized"
+ I X=99 S MSG="Unknown request"
+ ;
+ D ADD("")
+ D ADD(""_MSG_"")
+ D ADD("")
+ Q
+ ;
+ESC(X) ; -- escape outgoing XML
+ ; Q $ZCONVERT(X,"O","HTML") ; uncomment for fastest performance on Cache
+ ;
+ N I,Y,QOT S QOT=""""
+ S Y=$P(X,"&") F I=2:1:$L(X,"&") S Y=Y_"&"_$P(X,"&",I)
+ S X=Y,Y=$P(X,"<") F I=2:1:$L(X,"<") S Y=Y_"<"_$P(X,"<",I)
+ S X=Y,Y=$P(X,">") F I=2:1:$L(X,">") S Y=Y_">"_$P(X,">",I)
+ S X=Y,Y=$P(X,"'") F I=2:1:$L(X,"'") S Y=Y_"'"_$P(X,"'",I)
+ S X=Y,Y=$P(X,QOT) F I=2:1:$L(X,QOT) S Y=Y_"""_$P(X,QOT,I)
+ Q Y
+ ;
+ADD(X) ; Add a line @NHIN@(n)=X
+ S NHINI=$G(NHINI)+1
+ S @NHIN@(NHINI)=X
+ Q
+ ;
+STRING(ARRAY) ; -- Return text in ARRAY(n) or ARRAY(n,0) as a string
+ N I,X,Y S Y=""
+ S I=+$O(ARRAY("")) I I=0 S I=+$O(ARRAY(0))
+ S Y=$S($D(ARRAY(I,0)):ARRAY(I,0),1:$G(ARRAY(I)))
+ F S I=$O(ARRAY(I)) Q:I<1 D
+ . S X=$S($D(ARRAY(I,0)):ARRAY(I,0),1:ARRAY(I))
+ . I $E(X)=" " S Y=Y_$C(13,10)_X Q
+ . S Y=Y_$S($E(Y,$L(Y))=" ":"",1:" ")_X
+ Q Y
+ ;
+FAC(X) ; -- return Institution file station# for location X
+ N HLOC,FAC,Y0,Y S Y=""
+ S HLOC=$G(^SC(+$G(X),0)),FAC=$P(HLOC,U,4) ;Institution ien
+ ; Get P:4 via Med Ctr Div, if not directly linked
+ I 'FAC,$P(HLOC,U,15) S FAC=$$GET1^DIQ(40.8,+$P(HLOC,U,15)_",",.07,"I")
+ S Y0=$S(FAC:$$NS^XUAF4(FAC),1:$P($$SITE^VASITE,U,2,3)) ;name^stn#
+ S:$L(Y0) Y=$P(Y0,U,2)_U_$P(Y0,U) ;switch to stn#^name
+ I $L(Y),'Y S $P(Y,U)=FAC
+ Q Y
+ ;
+VUID(IEN,FILE) ; -- Return VUID for item
+ Q $$GET1^DIQ(FILE,IEN_",",99.99)
Index: smart/trunk/p/C0SPROB.m
===================================================================
--- smart/trunk/p/C0SPROB.m (revision 1569)
+++ smart/trunk/p/C0SPROB.m (revision 1571)
@@ -1,323 +1,323 @@
-C0SPROB ; GPL - Smart Problem Processing ;5/01/12 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
- ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- Q
- ;
- ; sample VistA NHIN problem list
- ;
- ;^TMP("C0STBL",91,"problem",1,"acuity@value")="C"
- ;^TMP("C0STBL",91,"problem",1,"entered@value")=3110531
- ;^TMP("C0STBL",91,"problem",1,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",1,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",1,"icd@value")=414.9
- ;^TMP("C0STBL",91,"problem",1,"id@value")=100
- ;^TMP("C0STBL",91,"problem",1,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",1,"name@value")="Coronary Artery Disease"
- ;^TMP("C0STBL",91,"problem",1,"onset@value")=3100201
- ;^TMP("C0STBL",91,"problem",1,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",1,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",1,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",1,"sc@value")=0
- ;^TMP("C0STBL",91,"problem",1,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",1,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",1,"updated@value")=3110531
- ;^TMP("C0STBL",91,"problem",2,"acuity@value")="C"
- ;^TMP("C0STBL",91,"problem",2,"entered@value")=3110602
- ;^TMP("C0STBL",91,"problem",2,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",2,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",2,"icd@value")=780.2
- ;^TMP("C0STBL",91,"problem",2,"id@value")=108
- ;^TMP("C0STBL",91,"problem",2,"name@value")="Syncope and collapse"
- ;^TMP("C0STBL",91,"problem",2,"onset@value")=3110102
- ;^TMP("C0STBL",91,"problem",2,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",2,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",2,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",2,"sc@value")=0
- ;^TMP("C0STBL",91,"problem",2,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",2,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",2,"updated@value")=3110602
- ;^TMP("C0STBL",91,"problem",3,"acuity@value")="C"
- ;^TMP("C0STBL",91,"problem",3,"entered@value")=3110602
- ;^TMP("C0STBL",91,"problem",3,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",3,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",3,"icd@value")=433.91
- ;^TMP("C0STBL",91,"problem",3,"id@value")=109
- ;^TMP("C0STBL",91,"problem",3,"name@value")="Occlusion and Stenosis of Unspecifid Precerebral Artery with Cerebral Infarctio"
- ;^TMP("C0STBL",91,"problem",3,"onset@value")=3100101
- ;^TMP("C0STBL",91,"problem",3,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",3,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",3,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",3,"sc@value")=0
- ;^TMP("C0STBL",91,"problem",3,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",3,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",3,"updated@value")=3110602
- ;^TMP("C0STBL",91,"problem",4,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",4,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",4,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",4,"icd@value")="00.66"
- ;^TMP("C0STBL",91,"problem",4,"id@value")=115
- ;^TMP("C0STBL",91,"problem",4,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",4,"name@value")="00.66"
- ;^TMP("C0STBL",91,"problem",4,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",4,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",4,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",4,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",4,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",4,"updated@value")=3110603
- ;^TMP("C0STBL",91,"problem",5,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",5,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",5,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",5,"icd@value")=37.21
- ;^TMP("C0STBL",91,"problem",5,"id@value")=116
- ;^TMP("C0STBL",91,"problem",5,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",5,"name@value")=37.21
- ;^TMP("C0STBL",91,"problem",5,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",5,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",5,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",5,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",5,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",5,"updated@value")=3110603
- ;^TMP("C0STBL",91,"problem",6,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",6,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",6,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",6,"icd@value")=81.51
- ;^TMP("C0STBL",91,"problem",6,"id@value")=117
- ;^TMP("C0STBL",91,"problem",6,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",6,"name@value")=81.51
- ;^TMP("C0STBL",91,"problem",6,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",6,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",6,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",6,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",6,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",6,"updated@value")=3110603
- ;^TMP("C0STBL",91,"problem",7,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",7,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",7,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",7,"icd@value")=47.09
- ;^TMP("C0STBL",91,"problem",7,"id@value")=118
- ;^TMP("C0STBL",91,"problem",7,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",7,"name@value")=47.09
- ;^TMP("C0STBL",91,"problem",7,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",7,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",7,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",7,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",7,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",7,"updated@value")=3110603
- ;^TMP("C0STBL",91,"problem",8,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",8,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",8,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",8,"icd@value")="250.00"
- ;^TMP("C0STBL",91,"problem",8,"id@value")=119
- ;^TMP("C0STBL",91,"problem",8,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",8,"name@value")="Diabetes Mellitus without mentionof Complication, type II or unspecified type,"
- ;^TMP("C0STBL",91,"problem",8,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",8,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",8,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",8,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",8,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",8,"updated@value")=3110603
- ;
- ; sample Smart lab result triples
- ;
- ;G("node16rk1fgdvx10882","code")="snomed:40930008"
- ;G("node16rk1fgdvx10882","dcterms:title")="Hypothyroidism"
- ;G("node16rk1fgdvx10882","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11051","code")="snomed:188155002"
- ;G("node16rk1fgdvx11051","dcterms:title")="Primary malignant neoplasm of lower outer quadrant of female breast"
- ;G("node16rk1fgdvx11051","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11073","code")="snomed:353295004"
- ;G("node16rk1fgdvx11073","dcterms:title")="Toxic diffuse goiter"
- ;G("node16rk1fgdvx11073","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11089","code")="snomed:54302000"
- ;G("node16rk1fgdvx11089","dcterms:title")="Disorder of breast"
- ;G("node16rk1fgdvx11089","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11351","code")="snomed:38341003"
- ;G("node16rk1fgdvx11351","dcterms:title")="Essential hypertension"
- ;G("node16rk1fgdvx11351","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11390","code")="snomed:44054006"
- ;G("node16rk1fgdvx11390","dcterms:title")="Diabetes mellitus type 2"
- ;G("node16rk1fgdvx11390","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11558","code")="snomed:195967001"
- ;G("node16rk1fgdvx11558","dcterms:title")="Asthma"
- ;G("node16rk1fgdvx11558","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11578","code")="snomed:254837009"
- ;G("node16rk1fgdvx11578","dcterms:title")="Primary malignant neoplasm of female breast"
- ;G("node16rk1fgdvx11578","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11687","code")="snomed:8517006"
- ;G("node16rk1fgdvx11687","dcterms:title")="History of tobacco use"
- ;G("node16rk1fgdvx11687","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11716","code")="snomed:55822004"
- ;G("node16rk1fgdvx11716","dcterms:title")="Hyperlipidemia"
- ;G("node16rk1fgdvx11716","rdf:type")="sp:CodedValue"
- ;G("smart:1577780/problems/69560e4721e1","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/69560e4721e1","problemName")="node16rk1fgdvx11089"
- ;G("smart:1577780/problems/69560e4721e1","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/69560e4721e1","startDate")="2005-08-02"
- ;G("smart:1577780/problems/06ef10c4e92c","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/06ef10c4e92c","problemName")="node16rk1fgdvx11051"
- ;G("smart:1577780/problems/06ef10c4e92c","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/06ef10c4e92c","startDate")="2006-02-20"
- ;G("smart:1577780/problems/9894ba9dfe5a","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/9894ba9dfe5a","problemName")="node16rk1fgdvx11578"
- ;G("smart:1577780/problems/9894ba9dfe5a","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/9894ba9dfe5a","startDate")="2005-08-22"
- ;G("smart:1577780/problems/c109aa7a0675","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/c109aa7a0675","problemName")="node16rk1fgdvx11558"
- ;G("smart:1577780/problems/c109aa7a0675","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/c109aa7a0675","startDate")="2005-09-22"
- ;G("smart:1577780/problems/1c50100614a2","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/1c50100614a2","problemName")="node16rk1fgdvx11073"
- ;G("smart:1577780/problems/1c50100614a2","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/1c50100614a2","startDate")="2007-02-21"
- ;G("smart:1577780/problems/083dffb2c4a0","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/083dffb2c4a0","problemName")="node16rk1fgdvx11390"
- ;G("smart:1577780/problems/083dffb2c4a0","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/083dffb2c4a0","startDate")="2007-01-07"
- ;G("smart:1577780/problems/762b5639a2d1","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/762b5639a2d1","problemName")="node16rk1fgdvx11687"
- ;G("smart:1577780/problems/762b5639a2d1","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/762b5639a2d1","startDate")="2006-02-20"
- ;G("smart:1577780/problems/9dc9053dd6f4","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/9dc9053dd6f4","problemName")="node16rk1fgdvx11716"
- ;G("smart:1577780/problems/9dc9053dd6f4","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/9dc9053dd6f4","startDate")="2008-04-08"
- ;G("smart:1577780/problems/e3fe9b7ee552","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/e3fe9b7ee552","problemName")="node16rk1fgdvx10882"
- ;G("smart:1577780/problems/e3fe9b7ee552","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/e3fe9b7ee552","startDate")="2005-10-27"
- ;G("smart:1577780/problems/9933307e8f95","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/9933307e8f95","problemName")="node16rk1fgdvx11351"
- ;G("smart:1577780/problems/9933307e8f95","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/9933307e8f95","startDate")="2005-08-22"
- ;G("snomed:188155002","dcterms:identifier")=188155002
- ;G("snomed:188155002","dcterms:title")="Primary malignant neoplasm of lower outer quadrant of female breast"
- ;G("snomed:188155002","rdf:type")="sp:Code"
- ;G("snomed:188155002","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:195967001","dcterms:identifier")=195967001
- ;G("snomed:195967001","dcterms:title")="Asthma"
- ;G("snomed:195967001","rdf:type")="sp:Code"
- ;G("snomed:195967001","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:254837009","dcterms:identifier")=254837009
- ;G("snomed:254837009","dcterms:title")="Primary malignant neoplasm of female breast"
- ;G("snomed:254837009","rdf:type")="sp:Code"
- ;G("snomed:254837009","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:353295004","dcterms:identifier")=353295004
- ;G("snomed:353295004","dcterms:title")="Toxic diffuse goiter"
- ;G("snomed:353295004","rdf:type")="sp:Code"
- ;G("snomed:353295004","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:38341003","dcterms:identifier")=38341003
- ;G("snomed:38341003","dcterms:title")="Essential hypertension"
- ;G("snomed:38341003","rdf:type")="sp:Code"
- ;G("snomed:38341003","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:40930008","dcterms:identifier")=40930008
- ;G("snomed:40930008","dcterms:title")="Hypothyroidism"
- ;G("snomed:40930008","rdf:type")="sp:Code"
- ;G("snomed:40930008","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:44054006","dcterms:identifier")=44054006
- ;G("snomed:44054006","dcterms:title")="Diabetes mellitus type 2"
- ;G("snomed:44054006","rdf:type")="sp:Code"
- ;G("snomed:44054006","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:54302000","dcterms:identifier")=54302000
- ;G("snomed:54302000","dcterms:title")="Disorder of breast"
- ;G("snomed:54302000","rdf:type")="sp:Code"
- ;G("snomed:54302000","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:55822004","dcterms:identifier")=55822004
- ;G("snomed:55822004","dcterms:title")="Hyperlipidemia"
- ;G("snomed:55822004","rdf:type")="sp:Code"
- ;G("snomed:55822004","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:8517006","dcterms:identifier")=8517006
- ;G("snomed:8517006","dcterms:title")="History of tobacco use"
- ;G("snomed:8517006","rdf:type")="sp:Code"
- ;G("snomed:8517006","system")="http://purl.bioontology.org/ontology/SNOMEDCT/"
-
- ;
-PROB(GRTN,C0SARY) ; GRTN, passed by reference,
- ; is the return name of the graph created. "" if none
- ; C0SARY is passed in by reference and is the NHIN array of problems
- ;
- I $O(C0SARY("problem",""))="" D Q ;
- . I $D(DEBUG) W !,"No Problems"
- S GRTN="" ; default to no problems
- N C0SGRF
- S C0SGRF="vistaSmart:"_ZPATID_"/problems"
- I $D(DEBUG) W !,"Processing ",C0SGRF
- D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
- D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
- N FARY S FARY="C0XFARY"
- D USEFARY^C0XF2N(FARY)
- D VOCINIT^C0XUTIL
- ;
- D STARTADD^C0XF2N ; initialize to create triples
- ;
- N ZI S ZI=""
- F S ZI=$O(C0SARY("problem",ZI)) Q:ZI="" D ;
- . N LRN,ZR ; ZR is the local array for building the new triples
- . S LRN=$NA(C0SARY("problem",ZI)) ; base for values in this lab result
- . ;
- . N PROBID ; unique Id for this problem
- . S PROBID=C0SGRF_"/"_$$LKY17^C0XF2N ; use a random number
- . ;
- . ; i don't like this because the same problems gets a
- . ; different ID every time it's reported. Can't trace it back to VistA
- . ; I'd rather be using id@value ie "id@value")="118"
- . ;
- . N SNOMED S SNOMED=$G(@LRN@("icd@value"))
- . N SNOGRF S SNOGRF="snomed:"_SNOMED
- . N SNOTIT S SNOTIT=$G(@LRN@("name@value"))
- . I $D(DEBUG) D ;
- . . W !,"Processing Problem List ",PROBID
- . . W !,"problem: ",SNOTIT
- . . W !,"code: ",SNOMED
- . ;
- . ; first do the base result graph
- . ;
- . S ZR("rdf:type")="sp:Problem"
- . S ZR("sp:belongsTo")=C0SGRF ; the subject for this patient's problems
- . ; ie /vista/smart/99912345/problems
- . ;
- . N PROBNAME S PROBNAME=$$ANONS^C0XF2N ; new node for problem name
- . S ZR("sp:problemName")=PROBNAME
- . ;
- . N STARTDT S STARTDT=$$SPDATE^C0SUTIL($G(@LRN@("entered@value")))
- . S ZR("sp:startDate")=STARTDT
- . ;
- . D ADDINN^C0XF2N(C0SGRF,PROBID,.ZR) ; addIfNotNull the triples
- . K ZR ; clean up
- . ;
- . ; create the problemName graph
- . ;
- . S ZR("rdf:type")="sp:CodedValue"
- . S ZR("sp:code")="snomed:"_SNOMED
- . S ZR("dcterms:title")=$G(@LRN@("name@value"))
- . D ADDINN^C0XF2N(C0SGRF,PROBNAME,.ZR)
- . K ZR
- . ;
- . ; create snomed graph
- . ;
- . S ZR("rdf:type")="sp:Code"
- . S ZR("sp:system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- . S ZR("dcterms:identifier")=SNOMED
- . S ZR("dcterms:title")=SNOTIT
- . D ADDINN^C0XF2N(C0SGRF,SNOGRF,.ZR)
- . K ZR
- . ;
- D BULKLOAD^C0XF2N(.C0XFDA)
- S GRTN=C0SGRF
- Q
- ;
+C0SPROB ; GPL - Smart Problem Processing ;5/01/12 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ Q
+ ;
+ ; sample VistA NHIN problem list
+ ;
+ ;^TMP("C0STBL",91,"problem",1,"acuity@value")="C"
+ ;^TMP("C0STBL",91,"problem",1,"entered@value")=3110531
+ ;^TMP("C0STBL",91,"problem",1,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",1,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",1,"icd@value")=414.9
+ ;^TMP("C0STBL",91,"problem",1,"id@value")=100
+ ;^TMP("C0STBL",91,"problem",1,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",1,"name@value")="Coronary Artery Disease"
+ ;^TMP("C0STBL",91,"problem",1,"onset@value")=3100201
+ ;^TMP("C0STBL",91,"problem",1,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",1,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",1,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",1,"sc@value")=0
+ ;^TMP("C0STBL",91,"problem",1,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",1,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",1,"updated@value")=3110531
+ ;^TMP("C0STBL",91,"problem",2,"acuity@value")="C"
+ ;^TMP("C0STBL",91,"problem",2,"entered@value")=3110602
+ ;^TMP("C0STBL",91,"problem",2,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",2,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",2,"icd@value")=780.2
+ ;^TMP("C0STBL",91,"problem",2,"id@value")=108
+ ;^TMP("C0STBL",91,"problem",2,"name@value")="Syncope and collapse"
+ ;^TMP("C0STBL",91,"problem",2,"onset@value")=3110102
+ ;^TMP("C0STBL",91,"problem",2,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",2,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",2,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",2,"sc@value")=0
+ ;^TMP("C0STBL",91,"problem",2,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",2,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",2,"updated@value")=3110602
+ ;^TMP("C0STBL",91,"problem",3,"acuity@value")="C"
+ ;^TMP("C0STBL",91,"problem",3,"entered@value")=3110602
+ ;^TMP("C0STBL",91,"problem",3,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",3,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",3,"icd@value")=433.91
+ ;^TMP("C0STBL",91,"problem",3,"id@value")=109
+ ;^TMP("C0STBL",91,"problem",3,"name@value")="Occlusion and Stenosis of Unspecifid Precerebral Artery with Cerebral Infarctio"
+ ;^TMP("C0STBL",91,"problem",3,"onset@value")=3100101
+ ;^TMP("C0STBL",91,"problem",3,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",3,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",3,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",3,"sc@value")=0
+ ;^TMP("C0STBL",91,"problem",3,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",3,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",3,"updated@value")=3110602
+ ;^TMP("C0STBL",91,"problem",4,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",4,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",4,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",4,"icd@value")="00.66"
+ ;^TMP("C0STBL",91,"problem",4,"id@value")=115
+ ;^TMP("C0STBL",91,"problem",4,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",4,"name@value")="00.66"
+ ;^TMP("C0STBL",91,"problem",4,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",4,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",4,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",4,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",4,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",4,"updated@value")=3110603
+ ;^TMP("C0STBL",91,"problem",5,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",5,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",5,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",5,"icd@value")=37.21
+ ;^TMP("C0STBL",91,"problem",5,"id@value")=116
+ ;^TMP("C0STBL",91,"problem",5,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",5,"name@value")=37.21
+ ;^TMP("C0STBL",91,"problem",5,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",5,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",5,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",5,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",5,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",5,"updated@value")=3110603
+ ;^TMP("C0STBL",91,"problem",6,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",6,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",6,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",6,"icd@value")=81.51
+ ;^TMP("C0STBL",91,"problem",6,"id@value")=117
+ ;^TMP("C0STBL",91,"problem",6,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",6,"name@value")=81.51
+ ;^TMP("C0STBL",91,"problem",6,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",6,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",6,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",6,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",6,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",6,"updated@value")=3110603
+ ;^TMP("C0STBL",91,"problem",7,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",7,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",7,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",7,"icd@value")=47.09
+ ;^TMP("C0STBL",91,"problem",7,"id@value")=118
+ ;^TMP("C0STBL",91,"problem",7,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",7,"name@value")=47.09
+ ;^TMP("C0STBL",91,"problem",7,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",7,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",7,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",7,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",7,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",7,"updated@value")=3110603
+ ;^TMP("C0STBL",91,"problem",8,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",8,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",8,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",8,"icd@value")="250.00"
+ ;^TMP("C0STBL",91,"problem",8,"id@value")=119
+ ;^TMP("C0STBL",91,"problem",8,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",8,"name@value")="Diabetes Mellitus without mentionof Complication, type II or unspecified type,"
+ ;^TMP("C0STBL",91,"problem",8,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",8,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",8,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",8,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",8,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",8,"updated@value")=3110603
+ ;
+ ; sample Smart lab result triples
+ ;
+ ;G("node16rk1fgdvx10882","code")="snomed:40930008"
+ ;G("node16rk1fgdvx10882","dcterms:title")="Hypothyroidism"
+ ;G("node16rk1fgdvx10882","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11051","code")="snomed:188155002"
+ ;G("node16rk1fgdvx11051","dcterms:title")="Primary malignant neoplasm of lower outer quadrant of female breast"
+ ;G("node16rk1fgdvx11051","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11073","code")="snomed:353295004"
+ ;G("node16rk1fgdvx11073","dcterms:title")="Toxic diffuse goiter"
+ ;G("node16rk1fgdvx11073","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11089","code")="snomed:54302000"
+ ;G("node16rk1fgdvx11089","dcterms:title")="Disorder of breast"
+ ;G("node16rk1fgdvx11089","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11351","code")="snomed:38341003"
+ ;G("node16rk1fgdvx11351","dcterms:title")="Essential hypertension"
+ ;G("node16rk1fgdvx11351","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11390","code")="snomed:44054006"
+ ;G("node16rk1fgdvx11390","dcterms:title")="Diabetes mellitus type 2"
+ ;G("node16rk1fgdvx11390","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11558","code")="snomed:195967001"
+ ;G("node16rk1fgdvx11558","dcterms:title")="Asthma"
+ ;G("node16rk1fgdvx11558","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11578","code")="snomed:254837009"
+ ;G("node16rk1fgdvx11578","dcterms:title")="Primary malignant neoplasm of female breast"
+ ;G("node16rk1fgdvx11578","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11687","code")="snomed:8517006"
+ ;G("node16rk1fgdvx11687","dcterms:title")="History of tobacco use"
+ ;G("node16rk1fgdvx11687","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11716","code")="snomed:55822004"
+ ;G("node16rk1fgdvx11716","dcterms:title")="Hyperlipidemia"
+ ;G("node16rk1fgdvx11716","rdf:type")="sp:CodedValue"
+ ;G("smart:1577780/problems/69560e4721e1","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/69560e4721e1","problemName")="node16rk1fgdvx11089"
+ ;G("smart:1577780/problems/69560e4721e1","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/69560e4721e1","startDate")="2005-08-02"
+ ;G("smart:1577780/problems/06ef10c4e92c","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/06ef10c4e92c","problemName")="node16rk1fgdvx11051"
+ ;G("smart:1577780/problems/06ef10c4e92c","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/06ef10c4e92c","startDate")="2006-02-20"
+ ;G("smart:1577780/problems/9894ba9dfe5a","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/9894ba9dfe5a","problemName")="node16rk1fgdvx11578"
+ ;G("smart:1577780/problems/9894ba9dfe5a","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/9894ba9dfe5a","startDate")="2005-08-22"
+ ;G("smart:1577780/problems/c109aa7a0675","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/c109aa7a0675","problemName")="node16rk1fgdvx11558"
+ ;G("smart:1577780/problems/c109aa7a0675","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/c109aa7a0675","startDate")="2005-09-22"
+ ;G("smart:1577780/problems/1c50100614a2","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/1c50100614a2","problemName")="node16rk1fgdvx11073"
+ ;G("smart:1577780/problems/1c50100614a2","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/1c50100614a2","startDate")="2007-02-21"
+ ;G("smart:1577780/problems/083dffb2c4a0","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/083dffb2c4a0","problemName")="node16rk1fgdvx11390"
+ ;G("smart:1577780/problems/083dffb2c4a0","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/083dffb2c4a0","startDate")="2007-01-07"
+ ;G("smart:1577780/problems/762b5639a2d1","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/762b5639a2d1","problemName")="node16rk1fgdvx11687"
+ ;G("smart:1577780/problems/762b5639a2d1","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/762b5639a2d1","startDate")="2006-02-20"
+ ;G("smart:1577780/problems/9dc9053dd6f4","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/9dc9053dd6f4","problemName")="node16rk1fgdvx11716"
+ ;G("smart:1577780/problems/9dc9053dd6f4","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/9dc9053dd6f4","startDate")="2008-04-08"
+ ;G("smart:1577780/problems/e3fe9b7ee552","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/e3fe9b7ee552","problemName")="node16rk1fgdvx10882"
+ ;G("smart:1577780/problems/e3fe9b7ee552","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/e3fe9b7ee552","startDate")="2005-10-27"
+ ;G("smart:1577780/problems/9933307e8f95","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/9933307e8f95","problemName")="node16rk1fgdvx11351"
+ ;G("smart:1577780/problems/9933307e8f95","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/9933307e8f95","startDate")="2005-08-22"
+ ;G("snomed:188155002","dcterms:identifier")=188155002
+ ;G("snomed:188155002","dcterms:title")="Primary malignant neoplasm of lower outer quadrant of female breast"
+ ;G("snomed:188155002","rdf:type")="sp:Code"
+ ;G("snomed:188155002","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:195967001","dcterms:identifier")=195967001
+ ;G("snomed:195967001","dcterms:title")="Asthma"
+ ;G("snomed:195967001","rdf:type")="sp:Code"
+ ;G("snomed:195967001","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:254837009","dcterms:identifier")=254837009
+ ;G("snomed:254837009","dcterms:title")="Primary malignant neoplasm of female breast"
+ ;G("snomed:254837009","rdf:type")="sp:Code"
+ ;G("snomed:254837009","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:353295004","dcterms:identifier")=353295004
+ ;G("snomed:353295004","dcterms:title")="Toxic diffuse goiter"
+ ;G("snomed:353295004","rdf:type")="sp:Code"
+ ;G("snomed:353295004","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:38341003","dcterms:identifier")=38341003
+ ;G("snomed:38341003","dcterms:title")="Essential hypertension"
+ ;G("snomed:38341003","rdf:type")="sp:Code"
+ ;G("snomed:38341003","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:40930008","dcterms:identifier")=40930008
+ ;G("snomed:40930008","dcterms:title")="Hypothyroidism"
+ ;G("snomed:40930008","rdf:type")="sp:Code"
+ ;G("snomed:40930008","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:44054006","dcterms:identifier")=44054006
+ ;G("snomed:44054006","dcterms:title")="Diabetes mellitus type 2"
+ ;G("snomed:44054006","rdf:type")="sp:Code"
+ ;G("snomed:44054006","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:54302000","dcterms:identifier")=54302000
+ ;G("snomed:54302000","dcterms:title")="Disorder of breast"
+ ;G("snomed:54302000","rdf:type")="sp:Code"
+ ;G("snomed:54302000","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:55822004","dcterms:identifier")=55822004
+ ;G("snomed:55822004","dcterms:title")="Hyperlipidemia"
+ ;G("snomed:55822004","rdf:type")="sp:Code"
+ ;G("snomed:55822004","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:8517006","dcterms:identifier")=8517006
+ ;G("snomed:8517006","dcterms:title")="History of tobacco use"
+ ;G("snomed:8517006","rdf:type")="sp:Code"
+ ;G("snomed:8517006","system")="http://purl.bioontology.org/ontology/SNOMEDCT/"
+
+ ;
+PROB(GRTN,C0SARY) ; GRTN, passed by reference,
+ ; is the return name of the graph created. "" if none
+ ; C0SARY is passed in by reference and is the NHIN array of problems
+ ;
+ I $O(C0SARY("problem",""))="" D Q ;
+ . I $D(DEBUG) W !,"No Problems"
+ S GRTN="" ; default to no problems
+ N C0SGRF
+ S C0SGRF="vistaSmart:"_ZPATID_"/problems"
+ I $D(DEBUG) W !,"Processing ",C0SGRF
+ D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
+ D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
+ N FARY S FARY="C0XFARY"
+ D USEFARY^C0XF2N(FARY)
+ D VOCINIT^C0XUTIL
+ ;
+ D STARTADD^C0XF2N ; initialize to create triples
+ ;
+ N ZI S ZI=""
+ F S ZI=$O(C0SARY("problem",ZI)) Q:ZI="" D ;
+ . N LRN,ZR ; ZR is the local array for building the new triples
+ . S LRN=$NA(C0SARY("problem",ZI)) ; base for values in this lab result
+ . ;
+ . N PROBID ; unique Id for this problem
+ . S PROBID=C0SGRF_"/"_$$LKY17^C0XF2N ; use a random number
+ . ;
+ . ; i don't like this because the same problems gets a
+ . ; different ID every time it's reported. Can't trace it back to VistA
+ . ; I'd rather be using id@value ie "id@value")="118"
+ . ;
+ . N SNOMED S SNOMED=$G(@LRN@("icd@value"))
+ . N SNOGRF S SNOGRF="snomed:"_SNOMED
+ . N SNOTIT S SNOTIT=$G(@LRN@("name@value"))
+ . I $D(DEBUG) D ;
+ . . W !,"Processing Problem List ",PROBID
+ . . W !,"problem: ",SNOTIT
+ . . W !,"code: ",SNOMED
+ . ;
+ . ; first do the base result graph
+ . ;
+ . S ZR("rdf:type")="sp:Problem"
+ . S ZR("sp:belongsTo")=C0SGRF ; the subject for this patient's problems
+ . ; ie /vista/smart/99912345/problems
+ . ;
+ . N PROBNAME S PROBNAME=$$ANONS^C0XF2N ; new node for problem name
+ . S ZR("sp:problemName")=PROBNAME
+ . ;
+ . N STARTDT S STARTDT=$$SPDATE^C0SUTIL($G(@LRN@("entered@value")))
+ . S ZR("sp:startDate")=STARTDT
+ . ;
+ . D ADDINN^C0XF2N(C0SGRF,PROBID,.ZR) ; addIfNotNull the triples
+ . K ZR ; clean up
+ . ;
+ . ; create the problemName graph
+ . ;
+ . S ZR("rdf:type")="sp:CodedValue"
+ . S ZR("sp:code")="snomed:"_SNOMED
+ . S ZR("dcterms:title")=$G(@LRN@("name@value"))
+ . D ADDINN^C0XF2N(C0SGRF,PROBNAME,.ZR)
+ . K ZR
+ . ;
+ . ; create snomed graph
+ . ;
+ . S ZR("rdf:type")="sp:Code"
+ . S ZR("sp:system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ . S ZR("dcterms:identifier")=SNOMED
+ . S ZR("dcterms:title")=SNOTIT
+ . D ADDINN^C0XF2N(C0SGRF,SNOGRF,.ZR)
+ . K ZR
+ . ;
+ D BULKLOAD^C0XF2N(.C0XFDA)
+ S GRTN=C0SGRF
+ Q
+ ;
Index: smart/trunk/p/C0SPROB2.m
===================================================================
--- smart/trunk/p/C0SPROB2.m (revision 1569)
+++ smart/trunk/p/C0SPROB2.m (revision 1571)
@@ -1,343 +1,343 @@
-C0SPROB ; GPL - Smart Problem Processing ;5/01/12 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
- ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- Q
- ;
- ; sample VistA NHIN problem list
- ;
- ;^TMP("C0STBL",91,"problem",1,"acuity@value")="C"
- ;^TMP("C0STBL",91,"problem",1,"entered@value")=3110531
- ;^TMP("C0STBL",91,"problem",1,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",1,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",1,"icd@value")=414.9
- ;^TMP("C0STBL",91,"problem",1,"id@value")=100
- ;^TMP("C0STBL",91,"problem",1,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",1,"name@value")="Coronary Artery Disease"
- ;^TMP("C0STBL",91,"problem",1,"onset@value")=3100201
- ;^TMP("C0STBL",91,"problem",1,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",1,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",1,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",1,"sc@value")=0
- ;^TMP("C0STBL",91,"problem",1,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",1,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",1,"updated@value")=3110531
- ;^TMP("C0STBL",91,"problem",2,"acuity@value")="C"
- ;^TMP("C0STBL",91,"problem",2,"entered@value")=3110602
- ;^TMP("C0STBL",91,"problem",2,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",2,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",2,"icd@value")=780.2
- ;^TMP("C0STBL",91,"problem",2,"id@value")=108
- ;^TMP("C0STBL",91,"problem",2,"name@value")="Syncope and collapse"
- ;^TMP("C0STBL",91,"problem",2,"onset@value")=3110102
- ;^TMP("C0STBL",91,"problem",2,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",2,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",2,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",2,"sc@value")=0
- ;^TMP("C0STBL",91,"problem",2,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",2,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",2,"updated@value")=3110602
- ;^TMP("C0STBL",91,"problem",3,"acuity@value")="C"
- ;^TMP("C0STBL",91,"problem",3,"entered@value")=3110602
- ;^TMP("C0STBL",91,"problem",3,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",3,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",3,"icd@value")=433.91
- ;^TMP("C0STBL",91,"problem",3,"id@value")=109
- ;^TMP("C0STBL",91,"problem",3,"name@value")="Occlusion and Stenosis of Unspecifid Precerebral Artery with Cerebral Infarctio"
- ;^TMP("C0STBL",91,"problem",3,"onset@value")=3100101
- ;^TMP("C0STBL",91,"problem",3,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",3,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",3,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",3,"sc@value")=0
- ;^TMP("C0STBL",91,"problem",3,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",3,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",3,"updated@value")=3110602
- ;^TMP("C0STBL",91,"problem",4,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",4,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",4,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",4,"icd@value")="00.66"
- ;^TMP("C0STBL",91,"problem",4,"id@value")=115
- ;^TMP("C0STBL",91,"problem",4,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",4,"name@value")="00.66"
- ;^TMP("C0STBL",91,"problem",4,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",4,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",4,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",4,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",4,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",4,"updated@value")=3110603
- ;^TMP("C0STBL",91,"problem",5,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",5,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",5,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",5,"icd@value")=37.21
- ;^TMP("C0STBL",91,"problem",5,"id@value")=116
- ;^TMP("C0STBL",91,"problem",5,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",5,"name@value")=37.21
- ;^TMP("C0STBL",91,"problem",5,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",5,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",5,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",5,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",5,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",5,"updated@value")=3110603
- ;^TMP("C0STBL",91,"problem",6,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",6,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",6,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",6,"icd@value")=81.51
- ;^TMP("C0STBL",91,"problem",6,"id@value")=117
- ;^TMP("C0STBL",91,"problem",6,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",6,"name@value")=81.51
- ;^TMP("C0STBL",91,"problem",6,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",6,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",6,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",6,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",6,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",6,"updated@value")=3110603
- ;^TMP("C0STBL",91,"problem",7,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",7,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",7,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",7,"icd@value")=47.09
- ;^TMP("C0STBL",91,"problem",7,"id@value")=118
- ;^TMP("C0STBL",91,"problem",7,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",7,"name@value")=47.09
- ;^TMP("C0STBL",91,"problem",7,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",7,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",7,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",7,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",7,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",7,"updated@value")=3110603
- ;^TMP("C0STBL",91,"problem",8,"entered@value")=3110603
- ;^TMP("C0STBL",91,"problem",8,"facility@code")=100
- ;^TMP("C0STBL",91,"problem",8,"facility@name")="VOE OFFICE INSTITUTION"
- ;^TMP("C0STBL",91,"problem",8,"icd@value")="250.00"
- ;^TMP("C0STBL",91,"problem",8,"id@value")=119
- ;^TMP("C0STBL",91,"problem",8,"location@value")="DR OFFICE"
- ;^TMP("C0STBL",91,"problem",8,"name@value")="Diabetes Mellitus without mentionof Complication, type II or unspecified type,"
- ;^TMP("C0STBL",91,"problem",8,"provider@code")=63
- ;^TMP("C0STBL",91,"problem",8,"provider@name")="KING,MATTHEW MICHAEL"
- ;^TMP("C0STBL",91,"problem",8,"removed@value")=0
- ;^TMP("C0STBL",91,"problem",8,"status@value")="A"
- ;^TMP("C0STBL",91,"problem",8,"unverified@value")=0
- ;^TMP("C0STBL",91,"problem",8,"updated@value")=3110603
- ;
- ; sample Smart lab result triples
- ;
- ;G("node16rk1fgdvx10882","code")="snomed:40930008"
- ;G("node16rk1fgdvx10882","dcterms:title")="Hypothyroidism"
- ;G("node16rk1fgdvx10882","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11051","code")="snomed:188155002"
- ;G("node16rk1fgdvx11051","dcterms:title")="Primary malignant neoplasm of lower outer quadrant of female breast"
- ;G("node16rk1fgdvx11051","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11073","code")="snomed:353295004"
- ;G("node16rk1fgdvx11073","dcterms:title")="Toxic diffuse goiter"
- ;G("node16rk1fgdvx11073","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11089","code")="snomed:54302000"
- ;G("node16rk1fgdvx11089","dcterms:title")="Disorder of breast"
- ;G("node16rk1fgdvx11089","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11351","code")="snomed:38341003"
- ;G("node16rk1fgdvx11351","dcterms:title")="Essential hypertension"
- ;G("node16rk1fgdvx11351","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11390","code")="snomed:44054006"
- ;G("node16rk1fgdvx11390","dcterms:title")="Diabetes mellitus type 2"
- ;G("node16rk1fgdvx11390","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11558","code")="snomed:195967001"
- ;G("node16rk1fgdvx11558","dcterms:title")="Asthma"
- ;G("node16rk1fgdvx11558","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11578","code")="snomed:254837009"
- ;G("node16rk1fgdvx11578","dcterms:title")="Primary malignant neoplasm of female breast"
- ;G("node16rk1fgdvx11578","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11687","code")="snomed:8517006"
- ;G("node16rk1fgdvx11687","dcterms:title")="History of tobacco use"
- ;G("node16rk1fgdvx11687","rdf:type")="sp:CodedValue"
- ;G("node16rk1fgdvx11716","code")="snomed:55822004"
- ;G("node16rk1fgdvx11716","dcterms:title")="Hyperlipidemia"
- ;G("node16rk1fgdvx11716","rdf:type")="sp:CodedValue"
- ;G("smart:1577780/problems/69560e4721e1","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/69560e4721e1","problemName")="node16rk1fgdvx11089"
- ;G("smart:1577780/problems/69560e4721e1","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/69560e4721e1","startDate")="2005-08-02"
- ;G("smart:1577780/problems/06ef10c4e92c","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/06ef10c4e92c","problemName")="node16rk1fgdvx11051"
- ;G("smart:1577780/problems/06ef10c4e92c","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/06ef10c4e92c","startDate")="2006-02-20"
- ;G("smart:1577780/problems/9894ba9dfe5a","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/9894ba9dfe5a","problemName")="node16rk1fgdvx11578"
- ;G("smart:1577780/problems/9894ba9dfe5a","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/9894ba9dfe5a","startDate")="2005-08-22"
- ;G("smart:1577780/problems/c109aa7a0675","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/c109aa7a0675","problemName")="node16rk1fgdvx11558"
- ;G("smart:1577780/problems/c109aa7a0675","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/c109aa7a0675","startDate")="2005-09-22"
- ;G("smart:1577780/problems/1c50100614a2","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/1c50100614a2","problemName")="node16rk1fgdvx11073"
- ;G("smart:1577780/problems/1c50100614a2","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/1c50100614a2","startDate")="2007-02-21"
- ;G("smart:1577780/problems/083dffb2c4a0","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/083dffb2c4a0","problemName")="node16rk1fgdvx11390"
- ;G("smart:1577780/problems/083dffb2c4a0","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/083dffb2c4a0","startDate")="2007-01-07"
- ;G("smart:1577780/problems/762b5639a2d1","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/762b5639a2d1","problemName")="node16rk1fgdvx11687"
- ;G("smart:1577780/problems/762b5639a2d1","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/762b5639a2d1","startDate")="2006-02-20"
- ;G("smart:1577780/problems/9dc9053dd6f4","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/9dc9053dd6f4","problemName")="node16rk1fgdvx11716"
- ;G("smart:1577780/problems/9dc9053dd6f4","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/9dc9053dd6f4","startDate")="2008-04-08"
- ;G("smart:1577780/problems/e3fe9b7ee552","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/e3fe9b7ee552","problemName")="node16rk1fgdvx10882"
- ;G("smart:1577780/problems/e3fe9b7ee552","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/e3fe9b7ee552","startDate")="2005-10-27"
- ;G("smart:1577780/problems/9933307e8f95","belongsTo")="smart:1577780"
- ;G("smart:1577780/problems/9933307e8f95","problemName")="node16rk1fgdvx11351"
- ;G("smart:1577780/problems/9933307e8f95","rdf:type")="sp:Problem"
- ;G("smart:1577780/problems/9933307e8f95","startDate")="2005-08-22"
- ;G("snomed:188155002","dcterms:identifier")=188155002
- ;G("snomed:188155002","dcterms:title")="Primary malignant neoplasm of lower outer quadrant of female breast"
- ;G("snomed:188155002","rdf:type")="sp:Code"
- ;G("snomed:188155002","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:195967001","dcterms:identifier")=195967001
- ;G("snomed:195967001","dcterms:title")="Asthma"
- ;G("snomed:195967001","rdf:type")="sp:Code"
- ;G("snomed:195967001","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:254837009","dcterms:identifier")=254837009
- ;G("snomed:254837009","dcterms:title")="Primary malignant neoplasm of female breast"
- ;G("snomed:254837009","rdf:type")="sp:Code"
- ;G("snomed:254837009","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:353295004","dcterms:identifier")=353295004
- ;G("snomed:353295004","dcterms:title")="Toxic diffuse goiter"
- ;G("snomed:353295004","rdf:type")="sp:Code"
- ;G("snomed:353295004","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:38341003","dcterms:identifier")=38341003
- ;G("snomed:38341003","dcterms:title")="Essential hypertension"
- ;G("snomed:38341003","rdf:type")="sp:Code"
- ;G("snomed:38341003","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:40930008","dcterms:identifier")=40930008
- ;G("snomed:40930008","dcterms:title")="Hypothyroidism"
- ;G("snomed:40930008","rdf:type")="sp:Code"
- ;G("snomed:40930008","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:44054006","dcterms:identifier")=44054006
- ;G("snomed:44054006","dcterms:title")="Diabetes mellitus type 2"
- ;G("snomed:44054006","rdf:type")="sp:Code"
- ;G("snomed:44054006","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:54302000","dcterms:identifier")=54302000
- ;G("snomed:54302000","dcterms:title")="Disorder of breast"
- ;G("snomed:54302000","rdf:type")="sp:Code"
- ;G("snomed:54302000","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:55822004","dcterms:identifier")=55822004
- ;G("snomed:55822004","dcterms:title")="Hyperlipidemia"
- ;G("snomed:55822004","rdf:type")="sp:Code"
- ;G("snomed:55822004","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- ;G("snomed:8517006","dcterms:identifier")=8517006
- ;G("snomed:8517006","dcterms:title")="History of tobacco use"
- ;G("snomed:8517006","rdf:type")="sp:Code"
- ;G("snomed:8517006","system")="http://purl.bioontology.org/ontology/SNOMEDCT/"
-
- ;
-PROB(GRTN,C0SARY) ; GRTN, passed by reference,
- ; is the return name of the graph created. "" if none
- ; C0SARY is passed in by reference and is the NHIN array of problems
- ;
- I $O(C0SARY("problem",""))="" D Q ;
- . I $D(DEBUG) W !,"No Problems"
- S GRTN="" ; default to no problems
- N C0SGRF
- S C0SGRF="vistaSmart:"_ZPATID_"/problems"
- I $D(DEBUG) W !,"Processing ",C0SGRF
- D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
- D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
- N FARY S FARY="C0XFARY"
- D USEFARY^C0XF2N(FARY)
- D VOCINIT^C0XUTIL
- ;
- D STARTADD^C0XF2N ; initialize to create triples
- ;
- N ZI S ZI=""
- F S ZI=$O(C0SARY("problem",ZI)) Q:ZI="" D ;
- . N LRN,ZR ; ZR is the local array for building the new triples
- . S LRN=$NA(C0SARY("problem",ZI)) ; base for values in this lab result
- . ;
- . N PROBID ; unique Id for this problem
- . S PROBID=C0SGRF_"/"_$$LKY17^C0XF2N ; use a random number
- . ;
- . ; i don't like this because the same problems gets a
- . ; different ID every time it's reported. Can't trace it back to VistA
- . ; I'd rather be using id@value ie "id@value")="118"
- . ;
- . N SNOMED,ICD S ICD=$G(@LRN@("icd@value"))
- . S SNOMED=$$SNOMED(ICD) ; look up the snomed code in the map
- . N SNOGRF ; graph for SNOMED code
- . I SNOMED="" D ;
- . . S SNOMED=ICD ; if not found, return the ICD code
- . . S SNOGRF="icd9:"_SNOMED
- . E S SNOGRF="snomed:"_SNOMED
- . N SNOTIT S SNOTIT=$G(@LRN@("name@value"))
- . I $D(DEBUG) D ;
- . . W !,"Processing Problem List ",PROBID
- . . W !,"problem: ",SNOTIT
- . . W !,"code: ",SNOMED
- . ;
- . ; first do the base result graph
- . ;
- . S ZR("rdf:type")="sp:Problem"
- . S ZR("sp:belongsTo")=C0SGRF ; the subject for this patient's problems
- . ; ie /vista/smart/99912345/problems
- . ;
- . N PROBNAME S PROBNAME=$$ANONS^C0XF2N ; new node for problem name
- . S ZR("sp:problemName")=PROBNAME
- . ;
- . N STARTDT S STARTDT=$$SPDATE^C0SUTIL($G(@LRN@("entered@value")))
- . S ZR("sp:startDate")=STARTDT
- . ;
- . D ADDINN^C0XF2N(C0SGRF,PROBID,.ZR) ; addIfNotNull the triples
- . K ZR ; clean up
- . ;
- . ; create the problemName graph
- . ;
- . S ZR("rdf:type")="sp:CodedValue"
- . ;S ZR("sp:code")="snomed:"_SNOMED
- . S ZR("sp:code")=SNOGRF
- . S ZR("dcterms:title")=$G(@LRN@("name@value"))
- . D ADDINN^C0XF2N(C0SGRF,PROBNAME,.ZR)
- . K ZR
- . ;
- . ; create snomed graph
- . ;
- . S ZR("rdf:type")="sp:Code"
- . S ZR("sp:system")="http://purl.bioontology.org/ontology/SNOMEDCT"
- . I SNOGRF["icd9" S ZR("sp:system")="http://purl.bioontology.org/ontology/ICD9"
- . S ZR("dcterms:identifier")=SNOMED
- . S ZR("dcterms:title")=SNOTIT
- . D ADDINN^C0XF2N(C0SGRF,SNOGRF,.ZR)
- . K ZR
- . ;
- D BULKLOAD^C0XF2N(.C0XFDA)
- S GRTN=C0SGRF
- Q
- ;
-SNOMED(ZICD) ; extrinsic which returns SNOMED code given an ICD9 code
- ; requires the mapping table installed in the triplestore
- ;
- N ZSN,ZARY,ZSUB,ZSUBS
- I $E(ZICD,$L(ZICD))="." S ZICD=$P(ZICD,".",1) ; handle trailing dots
- D subjects^C0XGET1(.ZSUBS,"cg:ontology#code",ZICD) ; subjects with the ICD9 code
- S ZSUB=$O(ZSUBS("")) ; pick the first one
- I ZSUB="" Q ""
- D objects^C0XGET1(.ZARY,ZSUB,"cg:ontology#toCode")
- S ZSN=$O(ZARY(""))
- I $D(DEBUG) W !,ZSN," ",$$object^C0XGET1(ZSUB,"rdfs:label")
- Q ZSN
- ;
+C0SPROB ; GPL - Smart Problem Processing ;5/01/12 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ Q
+ ;
+ ; sample VistA NHIN problem list
+ ;
+ ;^TMP("C0STBL",91,"problem",1,"acuity@value")="C"
+ ;^TMP("C0STBL",91,"problem",1,"entered@value")=3110531
+ ;^TMP("C0STBL",91,"problem",1,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",1,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",1,"icd@value")=414.9
+ ;^TMP("C0STBL",91,"problem",1,"id@value")=100
+ ;^TMP("C0STBL",91,"problem",1,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",1,"name@value")="Coronary Artery Disease"
+ ;^TMP("C0STBL",91,"problem",1,"onset@value")=3100201
+ ;^TMP("C0STBL",91,"problem",1,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",1,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",1,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",1,"sc@value")=0
+ ;^TMP("C0STBL",91,"problem",1,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",1,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",1,"updated@value")=3110531
+ ;^TMP("C0STBL",91,"problem",2,"acuity@value")="C"
+ ;^TMP("C0STBL",91,"problem",2,"entered@value")=3110602
+ ;^TMP("C0STBL",91,"problem",2,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",2,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",2,"icd@value")=780.2
+ ;^TMP("C0STBL",91,"problem",2,"id@value")=108
+ ;^TMP("C0STBL",91,"problem",2,"name@value")="Syncope and collapse"
+ ;^TMP("C0STBL",91,"problem",2,"onset@value")=3110102
+ ;^TMP("C0STBL",91,"problem",2,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",2,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",2,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",2,"sc@value")=0
+ ;^TMP("C0STBL",91,"problem",2,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",2,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",2,"updated@value")=3110602
+ ;^TMP("C0STBL",91,"problem",3,"acuity@value")="C"
+ ;^TMP("C0STBL",91,"problem",3,"entered@value")=3110602
+ ;^TMP("C0STBL",91,"problem",3,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",3,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",3,"icd@value")=433.91
+ ;^TMP("C0STBL",91,"problem",3,"id@value")=109
+ ;^TMP("C0STBL",91,"problem",3,"name@value")="Occlusion and Stenosis of Unspecifid Precerebral Artery with Cerebral Infarctio"
+ ;^TMP("C0STBL",91,"problem",3,"onset@value")=3100101
+ ;^TMP("C0STBL",91,"problem",3,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",3,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",3,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",3,"sc@value")=0
+ ;^TMP("C0STBL",91,"problem",3,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",3,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",3,"updated@value")=3110602
+ ;^TMP("C0STBL",91,"problem",4,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",4,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",4,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",4,"icd@value")="00.66"
+ ;^TMP("C0STBL",91,"problem",4,"id@value")=115
+ ;^TMP("C0STBL",91,"problem",4,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",4,"name@value")="00.66"
+ ;^TMP("C0STBL",91,"problem",4,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",4,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",4,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",4,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",4,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",4,"updated@value")=3110603
+ ;^TMP("C0STBL",91,"problem",5,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",5,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",5,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",5,"icd@value")=37.21
+ ;^TMP("C0STBL",91,"problem",5,"id@value")=116
+ ;^TMP("C0STBL",91,"problem",5,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",5,"name@value")=37.21
+ ;^TMP("C0STBL",91,"problem",5,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",5,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",5,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",5,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",5,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",5,"updated@value")=3110603
+ ;^TMP("C0STBL",91,"problem",6,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",6,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",6,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",6,"icd@value")=81.51
+ ;^TMP("C0STBL",91,"problem",6,"id@value")=117
+ ;^TMP("C0STBL",91,"problem",6,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",6,"name@value")=81.51
+ ;^TMP("C0STBL",91,"problem",6,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",6,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",6,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",6,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",6,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",6,"updated@value")=3110603
+ ;^TMP("C0STBL",91,"problem",7,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",7,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",7,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",7,"icd@value")=47.09
+ ;^TMP("C0STBL",91,"problem",7,"id@value")=118
+ ;^TMP("C0STBL",91,"problem",7,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",7,"name@value")=47.09
+ ;^TMP("C0STBL",91,"problem",7,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",7,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",7,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",7,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",7,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",7,"updated@value")=3110603
+ ;^TMP("C0STBL",91,"problem",8,"entered@value")=3110603
+ ;^TMP("C0STBL",91,"problem",8,"facility@code")=100
+ ;^TMP("C0STBL",91,"problem",8,"facility@name")="VOE OFFICE INSTITUTION"
+ ;^TMP("C0STBL",91,"problem",8,"icd@value")="250.00"
+ ;^TMP("C0STBL",91,"problem",8,"id@value")=119
+ ;^TMP("C0STBL",91,"problem",8,"location@value")="DR OFFICE"
+ ;^TMP("C0STBL",91,"problem",8,"name@value")="Diabetes Mellitus without mentionof Complication, type II or unspecified type,"
+ ;^TMP("C0STBL",91,"problem",8,"provider@code")=63
+ ;^TMP("C0STBL",91,"problem",8,"provider@name")="KING,MATTHEW MICHAEL"
+ ;^TMP("C0STBL",91,"problem",8,"removed@value")=0
+ ;^TMP("C0STBL",91,"problem",8,"status@value")="A"
+ ;^TMP("C0STBL",91,"problem",8,"unverified@value")=0
+ ;^TMP("C0STBL",91,"problem",8,"updated@value")=3110603
+ ;
+ ; sample Smart lab result triples
+ ;
+ ;G("node16rk1fgdvx10882","code")="snomed:40930008"
+ ;G("node16rk1fgdvx10882","dcterms:title")="Hypothyroidism"
+ ;G("node16rk1fgdvx10882","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11051","code")="snomed:188155002"
+ ;G("node16rk1fgdvx11051","dcterms:title")="Primary malignant neoplasm of lower outer quadrant of female breast"
+ ;G("node16rk1fgdvx11051","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11073","code")="snomed:353295004"
+ ;G("node16rk1fgdvx11073","dcterms:title")="Toxic diffuse goiter"
+ ;G("node16rk1fgdvx11073","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11089","code")="snomed:54302000"
+ ;G("node16rk1fgdvx11089","dcterms:title")="Disorder of breast"
+ ;G("node16rk1fgdvx11089","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11351","code")="snomed:38341003"
+ ;G("node16rk1fgdvx11351","dcterms:title")="Essential hypertension"
+ ;G("node16rk1fgdvx11351","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11390","code")="snomed:44054006"
+ ;G("node16rk1fgdvx11390","dcterms:title")="Diabetes mellitus type 2"
+ ;G("node16rk1fgdvx11390","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11558","code")="snomed:195967001"
+ ;G("node16rk1fgdvx11558","dcterms:title")="Asthma"
+ ;G("node16rk1fgdvx11558","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11578","code")="snomed:254837009"
+ ;G("node16rk1fgdvx11578","dcterms:title")="Primary malignant neoplasm of female breast"
+ ;G("node16rk1fgdvx11578","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11687","code")="snomed:8517006"
+ ;G("node16rk1fgdvx11687","dcterms:title")="History of tobacco use"
+ ;G("node16rk1fgdvx11687","rdf:type")="sp:CodedValue"
+ ;G("node16rk1fgdvx11716","code")="snomed:55822004"
+ ;G("node16rk1fgdvx11716","dcterms:title")="Hyperlipidemia"
+ ;G("node16rk1fgdvx11716","rdf:type")="sp:CodedValue"
+ ;G("smart:1577780/problems/69560e4721e1","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/69560e4721e1","problemName")="node16rk1fgdvx11089"
+ ;G("smart:1577780/problems/69560e4721e1","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/69560e4721e1","startDate")="2005-08-02"
+ ;G("smart:1577780/problems/06ef10c4e92c","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/06ef10c4e92c","problemName")="node16rk1fgdvx11051"
+ ;G("smart:1577780/problems/06ef10c4e92c","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/06ef10c4e92c","startDate")="2006-02-20"
+ ;G("smart:1577780/problems/9894ba9dfe5a","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/9894ba9dfe5a","problemName")="node16rk1fgdvx11578"
+ ;G("smart:1577780/problems/9894ba9dfe5a","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/9894ba9dfe5a","startDate")="2005-08-22"
+ ;G("smart:1577780/problems/c109aa7a0675","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/c109aa7a0675","problemName")="node16rk1fgdvx11558"
+ ;G("smart:1577780/problems/c109aa7a0675","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/c109aa7a0675","startDate")="2005-09-22"
+ ;G("smart:1577780/problems/1c50100614a2","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/1c50100614a2","problemName")="node16rk1fgdvx11073"
+ ;G("smart:1577780/problems/1c50100614a2","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/1c50100614a2","startDate")="2007-02-21"
+ ;G("smart:1577780/problems/083dffb2c4a0","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/083dffb2c4a0","problemName")="node16rk1fgdvx11390"
+ ;G("smart:1577780/problems/083dffb2c4a0","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/083dffb2c4a0","startDate")="2007-01-07"
+ ;G("smart:1577780/problems/762b5639a2d1","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/762b5639a2d1","problemName")="node16rk1fgdvx11687"
+ ;G("smart:1577780/problems/762b5639a2d1","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/762b5639a2d1","startDate")="2006-02-20"
+ ;G("smart:1577780/problems/9dc9053dd6f4","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/9dc9053dd6f4","problemName")="node16rk1fgdvx11716"
+ ;G("smart:1577780/problems/9dc9053dd6f4","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/9dc9053dd6f4","startDate")="2008-04-08"
+ ;G("smart:1577780/problems/e3fe9b7ee552","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/e3fe9b7ee552","problemName")="node16rk1fgdvx10882"
+ ;G("smart:1577780/problems/e3fe9b7ee552","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/e3fe9b7ee552","startDate")="2005-10-27"
+ ;G("smart:1577780/problems/9933307e8f95","belongsTo")="smart:1577780"
+ ;G("smart:1577780/problems/9933307e8f95","problemName")="node16rk1fgdvx11351"
+ ;G("smart:1577780/problems/9933307e8f95","rdf:type")="sp:Problem"
+ ;G("smart:1577780/problems/9933307e8f95","startDate")="2005-08-22"
+ ;G("snomed:188155002","dcterms:identifier")=188155002
+ ;G("snomed:188155002","dcterms:title")="Primary malignant neoplasm of lower outer quadrant of female breast"
+ ;G("snomed:188155002","rdf:type")="sp:Code"
+ ;G("snomed:188155002","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:195967001","dcterms:identifier")=195967001
+ ;G("snomed:195967001","dcterms:title")="Asthma"
+ ;G("snomed:195967001","rdf:type")="sp:Code"
+ ;G("snomed:195967001","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:254837009","dcterms:identifier")=254837009
+ ;G("snomed:254837009","dcterms:title")="Primary malignant neoplasm of female breast"
+ ;G("snomed:254837009","rdf:type")="sp:Code"
+ ;G("snomed:254837009","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:353295004","dcterms:identifier")=353295004
+ ;G("snomed:353295004","dcterms:title")="Toxic diffuse goiter"
+ ;G("snomed:353295004","rdf:type")="sp:Code"
+ ;G("snomed:353295004","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:38341003","dcterms:identifier")=38341003
+ ;G("snomed:38341003","dcterms:title")="Essential hypertension"
+ ;G("snomed:38341003","rdf:type")="sp:Code"
+ ;G("snomed:38341003","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:40930008","dcterms:identifier")=40930008
+ ;G("snomed:40930008","dcterms:title")="Hypothyroidism"
+ ;G("snomed:40930008","rdf:type")="sp:Code"
+ ;G("snomed:40930008","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:44054006","dcterms:identifier")=44054006
+ ;G("snomed:44054006","dcterms:title")="Diabetes mellitus type 2"
+ ;G("snomed:44054006","rdf:type")="sp:Code"
+ ;G("snomed:44054006","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:54302000","dcterms:identifier")=54302000
+ ;G("snomed:54302000","dcterms:title")="Disorder of breast"
+ ;G("snomed:54302000","rdf:type")="sp:Code"
+ ;G("snomed:54302000","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:55822004","dcterms:identifier")=55822004
+ ;G("snomed:55822004","dcterms:title")="Hyperlipidemia"
+ ;G("snomed:55822004","rdf:type")="sp:Code"
+ ;G("snomed:55822004","system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ ;G("snomed:8517006","dcterms:identifier")=8517006
+ ;G("snomed:8517006","dcterms:title")="History of tobacco use"
+ ;G("snomed:8517006","rdf:type")="sp:Code"
+ ;G("snomed:8517006","system")="http://purl.bioontology.org/ontology/SNOMEDCT/"
+
+ ;
+PROB(GRTN,C0SARY) ; GRTN, passed by reference,
+ ; is the return name of the graph created. "" if none
+ ; C0SARY is passed in by reference and is the NHIN array of problems
+ ;
+ I $O(C0SARY("problem",""))="" D Q ;
+ . I $D(DEBUG) W !,"No Problems"
+ S GRTN="" ; default to no problems
+ N C0SGRF
+ S C0SGRF="vistaSmart:"_ZPATID_"/problems"
+ I $D(DEBUG) W !,"Processing ",C0SGRF
+ D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
+ D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
+ N FARY S FARY="C0XFARY"
+ D USEFARY^C0XF2N(FARY)
+ D VOCINIT^C0XUTIL
+ ;
+ D STARTADD^C0XF2N ; initialize to create triples
+ ;
+ N ZI S ZI=""
+ F S ZI=$O(C0SARY("problem",ZI)) Q:ZI="" D ;
+ . N LRN,ZR ; ZR is the local array for building the new triples
+ . S LRN=$NA(C0SARY("problem",ZI)) ; base for values in this lab result
+ . ;
+ . N PROBID ; unique Id for this problem
+ . S PROBID=C0SGRF_"/"_$$LKY17^C0XF2N ; use a random number
+ . ;
+ . ; i don't like this because the same problems gets a
+ . ; different ID every time it's reported. Can't trace it back to VistA
+ . ; I'd rather be using id@value ie "id@value")="118"
+ . ;
+ . N SNOMED,ICD S ICD=$G(@LRN@("icd@value"))
+ . S SNOMED=$$SNOMED(ICD) ; look up the snomed code in the map
+ . N SNOGRF ; graph for SNOMED code
+ . I SNOMED="" D ;
+ . . S SNOMED=ICD ; if not found, return the ICD code
+ . . S SNOGRF="icd9:"_SNOMED
+ . E S SNOGRF="snomed:"_SNOMED
+ . N SNOTIT S SNOTIT=$G(@LRN@("name@value"))
+ . I $D(DEBUG) D ;
+ . . W !,"Processing Problem List ",PROBID
+ . . W !,"problem: ",SNOTIT
+ . . W !,"code: ",SNOMED
+ . ;
+ . ; first do the base result graph
+ . ;
+ . S ZR("rdf:type")="sp:Problem"
+ . S ZR("sp:belongsTo")=C0SGRF ; the subject for this patient's problems
+ . ; ie /vista/smart/99912345/problems
+ . ;
+ . N PROBNAME S PROBNAME=$$ANONS^C0XF2N ; new node for problem name
+ . S ZR("sp:problemName")=PROBNAME
+ . ;
+ . N STARTDT S STARTDT=$$SPDATE^C0SUTIL($G(@LRN@("entered@value")))
+ . S ZR("sp:startDate")=STARTDT
+ . ;
+ . D ADDINN^C0XF2N(C0SGRF,PROBID,.ZR) ; addIfNotNull the triples
+ . K ZR ; clean up
+ . ;
+ . ; create the problemName graph
+ . ;
+ . S ZR("rdf:type")="sp:CodedValue"
+ . ;S ZR("sp:code")="snomed:"_SNOMED
+ . S ZR("sp:code")=SNOGRF
+ . S ZR("dcterms:title")=$G(@LRN@("name@value"))
+ . D ADDINN^C0XF2N(C0SGRF,PROBNAME,.ZR)
+ . K ZR
+ . ;
+ . ; create snomed graph
+ . ;
+ . S ZR("rdf:type")="sp:Code"
+ . S ZR("sp:system")="http://purl.bioontology.org/ontology/SNOMEDCT"
+ . I SNOGRF["icd9" S ZR("sp:system")="http://purl.bioontology.org/ontology/ICD9"
+ . S ZR("dcterms:identifier")=SNOMED
+ . S ZR("dcterms:title")=SNOTIT
+ . D ADDINN^C0XF2N(C0SGRF,SNOGRF,.ZR)
+ . K ZR
+ . ;
+ D BULKLOAD^C0XF2N(.C0XFDA)
+ S GRTN=C0SGRF
+ Q
+ ;
+SNOMED(ZICD) ; extrinsic which returns SNOMED code given an ICD9 code
+ ; requires the mapping table installed in the triplestore
+ ;
+ N ZSN,ZARY,ZSUB,ZSUBS
+ I $E(ZICD,$L(ZICD))="." S ZICD=$P(ZICD,".",1) ; handle trailing dots
+ D subjects^C0XGET1(.ZSUBS,"cg:ontology#code",ZICD) ; subjects with the ICD9 code
+ S ZSUB=$O(ZSUBS("")) ; pick the first one
+ I ZSUB="" Q ""
+ D objects^C0XGET1(.ZARY,ZSUB,"cg:ontology#toCode")
+ S ZSN=$O(ZARY(""))
+ I $D(DEBUG) W !,ZSN," ",$$object^C0XGET1(ZSUB,"rdfs:label")
+ Q ZSN
+ ;
Index: smart/trunk/p/C0STBL.m
===================================================================
--- smart/trunk/p/C0STBL.m (revision 1569)
+++ smart/trunk/p/C0STBL.m (revision 1571)
@@ -1,4 +1,4 @@
-C0STBL ; GPL - Smart Container CREATE A TABLE OF NHINV VALUES;2/22/12 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
+C0STBL ; GPL - Smart Container CREATE A TABLE OF NHINV VALUES;2/22/12 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
Index: smart/trunk/p/C0SUTIL.m
===================================================================
--- smart/trunk/p/C0SUTIL.m (revision 1569)
+++ smart/trunk/p/C0SUTIL.m (revision 1571)
@@ -1,34 +1,34 @@
-C0SUTIL ; GPL - Smart Processing Utilities ;2/22/12 17:05
- ;;0.1;C0S;nopatch;noreleasedate;Build 2
- ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- Q
- ;
-SPDATE(ZDATE) ; extrinsic which returns the Smart date format yyyy-mm-dd
- ; ZDATE is a fileman format date
- N TMPDT
- S TMPDT=$$FMTE^XLFDT(ZDATE,"7D") ; ordered date
- S TMPDT=$TR(TMPDT,"/","-") ; change slashes to hyphens
- I TMPDT="" S TMPDT="UNKNOWN"
- N Z2,Z3
- S Z2=$P(TMPDT,"-",2)
- S Z3=$P(TMPDT,"-",3)
- I $L(Z2)=1 S $P(TMPDT,"-",2)="0"_Z2
- I $L(Z3)=1 S $P(TMPDT,"-",3)="0"_Z3
- Q TMPDT
- ;
+C0SUTIL ; GPL - Smart Processing Utilities ;2/22/12 17:05
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ Q
+ ;
+SPDATE(ZDATE) ; extrinsic which returns the Smart date format yyyy-mm-dd
+ ; ZDATE is a fileman format date
+ N TMPDT
+ S TMPDT=$$FMTE^XLFDT(ZDATE,"7D") ; ordered date
+ S TMPDT=$TR(TMPDT,"/","-") ; change slashes to hyphens
+ I TMPDT="" S TMPDT="UNKNOWN"
+ N Z2,Z3
+ S Z2=$P(TMPDT,"-",2)
+ S Z3=$P(TMPDT,"-",3)
+ I $L(Z2)=1 S $P(TMPDT,"-",2)="0"_Z2
+ I $L(Z3)=1 S $P(TMPDT,"-",3)="0"_Z3
+ Q TMPDT
+ ;
Index: smart/trunk/p/C0SXPATH.m
===================================================================
--- smart/trunk/p/C0SXPATH.m (revision 1569)
+++ smart/trunk/p/C0SXPATH.m (revision 1571)
@@ -1,726 +1,726 @@
-C0SXPATH ; CCDCCR/GPL - XPATH XML manipulation utilities; 6/1/08
- ;;1.0;C0S;;May 19, 2009;Build 2
- ;Copyright 2008-2012 George Lilly. Licensed under the terms of the GNU
- ;General Public License See attached copy of the License.
- ;
- ;This program is free software; you can redistribute it and/or modify
- ;it under the terms of the GNU General Public License as published by
- ;the Free Software Foundation; either version 2 of the License, or
- ;(at your option) any later version.
- ;
- ;This program is distributed in the hope that it will be useful,
- ;but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;GNU General Public License for more details.
- ;
- ;You should have received a copy of the GNU General Public License along
- ;with this program; if not, write to the Free Software Foundation, Inc.,
- ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
- ;
- W "This is an XML XPATH utility library",!
- W !
- Q
- ;
-OUTPUT(OUTARY,OUTNAME,OUTDIR) ; WRITE AN ARRAY TO A FILE
- ;
- N Y
- S Y=$$GTF^%ZISH(OUTARY,$QL(OUTARY),OUTDIR,OUTNAME)
- I Y Q 1_U_"WROTE FILE: "_OUTNAME_" TO "_OUTDIR
- I 'Y Q 0_U_"ERROR WRITING FILE"_OUTNAME_" TO "_OUTDIR
- Q
- ;
-PUSH(STK,VAL) ; pushs VAL onto STK and updates STK(0)
- ; VAL IS A STRING AND STK IS PASSED BY NAME
- ;
- I '$D(@STK@(0)) S @STK@(0)=0 ; IF THE ARRAY IS EMPTY, INITIALIZE
- S @STK@(0)=@STK@(0)+1 ; INCREMENT ARRAY DEPTH
- S @STK@(@STK@(0))=VAL ; PUT VAL A THE END OF THE ARRAY
- Q
- ;
-POP(STK,VAL) ; POPS THE LAST VALUE OFF THE STK AND RETURNS IT IN VAL
- ; VAL AND STK ARE PASSED BY REFERENCE
- ;
- I @STK@(0)<1 D ; IF ARRAY IS EMPTY
- . S VAL=""
- . S @STK@(0)=0
- I @STK@(0)>0 D ;
- . S VAL=@STK@(@STK@(0))
- . K @STK@(@STK@(0))
- . S @STK@(0)=@STK@(0)-1 ; NEW DEPTH OF THE ARRAY
- Q
- ;
-PUSHA(ADEST,ASRC) ; PUSH ASRC ONTO ADEST, BOTH PASSED BY NAME
- ;
- N ZGI
- F ZGI=1:1:@ASRC@(0) D ; FOR ALL OF THE SOURCE ARRAY
- . D PUSH(ADEST,@ASRC@(ZGI)) ; PUSH ONE ELEMENT
- Q
- ;
-MKMDX(STK,RTN,INREDUX) ; MAKES A MUMPS INDEX FROM THE ARRAY STK
- ; RTN IS SET TO //FIRST/SECOND/THIRD FOR THREE ARRAY ELEMENTS
- ; REDUX IS A STRING TO REMOVE FROM THE RESULT
- S RTN=""
- N I
- ; W "STK= ",STK,!
- I @STK@(0)>0 D ; IF THE ARRAY IS NOT EMPTY
- . S RTN="//"_@STK@(1) ; FIRST ELEMENT NEEDS NO SEMICOLON
- . I @STK@(0)>1 D ; SUBSEQUENT ELEMENTS NEED A SEMICOLON
- . . F I=2:1:@STK@(0) S RTN=RTN_"/"_@STK@(I)
- I $G(INREDUX)'="" S RTN=$P(RTN,INREDUX,1)_$P(RTN,INREDUX,2)
- Q
- ;
-XNAME(ISTR) ; FUNCTION TO EXTRACT A NAME FROM AN XML FRAG
- ; AND WILL RETURN NAME
- ; ISTR IS PASSED BY VALUE
- N CUR,TMP
- I ISTR?.E1"<".E D ; STRIP OFF LEFT BRACKET
- . S TMP=$P(ISTR,"<",2)
- I TMP?1"/".E D ; ALSO STRIP OFF SLASH IF PRESENT IE
- . S TMP=$P(TMP,"/",2)
- S CUR=$P(TMP,">",1) ; EXTRACT THE NAME
- ; W "CUR= ",CUR,!
- I CUR?.1"_"1.A1" ".E D ; CONTAINS A BLANK IE NAME ID=TEST>
- . S CUR=$P(CUR," ",1) ; STRIP OUT BLANK AND AFTER
- ; W "CUR2= ",CUR,!
- Q CUR
- ;
-XVAL(ISTR) ; EXTRACTS THE VALUE FROM A FRAGMENT OF XML
- ; VALUE WILL RETURN VALUE
- N G
- S G=$P(ISTR,">",2) ;STRIP OFF
- Q $P(G,"<",1) ; STRIP OFF LEAVING VALUE
- ;
-VDX2VDV(OUTVDV,INVDX) ; CONVERT AN VDX ARRAY TO VDV
- ; VDX: @INVDX@(XPATH)=VALUE
- ; VDV: @OUTVDV@(X1X2X3X4)=VALUE
- ; THE VDV DATANAMES MIGHT BE MORE CONVENIENT FOR USE IN CODE
- ; AN INDEX IS PROVIDED TO GO BACK TO VDX FOR CONVERSIONS
- ; @VDV@("XPATH",X1X2X3X4)="XPATH"
- N ZA,ZI,ZW
- S ZI=""
- F S ZI=$O(@INVDX@(ZI)) Q:ZI="" D ;
- . S ZW=$TR(ZI,"/","") ; ELIMINATE ALL SLASHES - CAMEL CASE VARIABLE NAME
- . W ZW,!
- . S @OUTVDV@(ZW)=@INVDX@(ZI)
- . S @OUTVDV@("XPATH",ZW)=ZI
- Q
- ;
-VDX2XPG(OUTXPG,INVDX) ; CONVERT AN VDX ARRAY TO XPG
- ; VDX: @VDX@(XPATH)=VALUE
- ; XPG: @(VDX(X1,X2,X3,X4))@=VALUE
- ; THIS IS A STEP TOWARD GENERATING XML FROM A VDX
- N ZA,ZI,ZW
- S ZI=""
- F S ZI=$O(@INVDX@(ZI)) Q:ZI="" D ;
- . S ZW=$E(ZI,3,$L(ZI)) ; STRIP OFF INITIAL //
- . S ZW2=$P(ZW,"/",1)
- . F ZK=1:1:$L(ZW,"/") D PUSH("ZA",$P(ZW,"/",ZK))
- . ;ZWR ZA
- . S ZW2=ZA(1)
- . F ZK=2:1:ZA(0) D ;
- . . S ZW2=ZW2_""","""_ZA(ZK)
- . K ZA
- . S ZW2=""""_ZW2_""""
- . W ZW2,!
- . S ZN=OUTXPG_"("_ZW2_")"
- . S @ZN=@INVDX@(ZI)
- Q
- ;
-XML2XPG(OUTXPG,INXML) ; CONVERT AN XML ARRAY, PASSED BY NAME TO AN XPG ARRAY
- ; XPG MEANS XPATH GLOBAL AND HAS THE FORM @OUTXPG@("X1","X2","X3")=VALUE
- ;
- ;N G1
- D INDEX(INXML,"G1",1) ; PRODUCES A VDX ARRAY IN G1, NO INDEX IS PRODUCED
- D VDX2XPG(OUTXPG,"G1") ; CONVERTS THE VDX ARRAY TO XPG FORM
- Q
- ;
-DO
- D XPG2XML("^GPL2B","^GPL2A")
- Q
- ;
-T1 ; TEST OUT THESE ROUTINES
- D XML2XPG("G2","^GPL")
- D XPG2XML("G3","G2")
- K ^GPLOUT
- M ^GPLOUT=G3
- W $$OUTPUT^C0CXPATH("^GPLOUT(1)","GPLTEST.xml","/home/vademo2/EHR/p")
- Q
- ;
-XPG2XML(OUTXML,INXPG) ;
- N C0CN,FWD,ZA,G,GA,ZQ
- S ZQ=0 ; QUIT FLAG
- F Q:ZQ=1 D ; LOOP THROUGH EVERYTHING
- . I '$D(C0CN) D ; FIRST TIME THROUGH
- . . K @OUTXML ; MAKE SURE OUTPUT ARRAY IS CLEAR
- . . S FWD=1 ; START OUT GOING FORWARD THROUGH SUBSCRIPTS
- . . S G=$Q(@INXPG) ; THIS ONE
- . . S GN=$Q(@G) ; NEXT ONE
- . . S C0CN=1 ; SUBSCRIPT COUNT
- . . S ZQ=0 ; QUIT FLAG
- . . D ZXO("?xml version=""1.0"" encoding=""UTF-8""?") ;MAKE IT REAL XML
- . . I $QS(G,1)="ContinuityOfCareRecord" D ;
- . . . D ZXO("?xml-stylesheet type=""text/xsl"" href=""ccr.xsl""?") ; HACK TO MAKE THE CCR STYLESHEET WORK
- . I FWD D ; GOING FORWARDS
- . . I C0CN<$QL(G) D ; NOT A DATA NODE
- . . . S ZA=$QS(G,C0CN) ; PULL OUT THE SUBSCRIPT
- . . . D ZXO(ZA) ; AND OPEN AN XML ELEMENT
- . . . I @OUTXML@(@OUTXML@(0))="" D ;
- . . . . S @OUTXML@(@OUTXML@(0))=""
- . . . S C0CN=C0CN+1 ; MOVE TO THE NEXT ONE
- . . E D ; AT THE DATA NODE
- . . . S ZA=$QS(G,C0CN) ; PULL OUT THE SUBSCRIPT
- . . . D ZXVAL(ZA,@G) ; OUTPUT VAL FOR DATA NODE
- . . . S FWD=0 ; GO BACKWARDS
- . I 'FWD D ;GOING BACKWARDS
- . . S GN=$Q(@G) ;NEXT XPATH
- . . ;W "NEXT!",GN,!
- . . S C0CN=C0CN-1 ; PREVIOUS SUBSCRIPT
- . . I GN'="" D ;
- . . . I $QS(G,C0CN)'=$QS(GN,C0CN) D ; NEED TO CLOSE OFF ELEMENT
- . . . . D ZXC($QS(G,C0CN)) ;
- . . . E I GN'="" D ; MORE ELEMENTS AT THIS LEVEL
- . . . . S G=$Q(@G) ; ADVANCE TO NEW XPATH
- . . . . S C0CN=C0CN+1 ; GET READY TO PROCESS NEXT SUBSCRIPT
- . . . . S FWD=1 ; GOING FORWARD NOW
- . I (GN="")&(C0CN=1) D Q ; WHEN WE ARE ALL DONE
- . . D ZXC($QS(G,C0CN)) ; LAST ONE
- . . S ZQ=1 ; QUIT NOW
- Q
- ;
-ZXO(WHAT)
- D PUSH("GA",WHAT)
- D PUSH(OUTXML,"<"_WHAT_">")
- Q
- ;
-ZXC(WHAT)
- D POP("GA",.TMP)
- D PUSH(OUTXML,"")
- Q
- ;
-ZXVAL(WHAT,VAL)
- D PUSH(OUTXML,"<"_WHAT_">"_VAL_"")
- Q
- ;
-INDEX(IZXML,VDX,NOINX,TEMPLATE,REDUX) ; parse XML in IZXML and produce
- ; an XPATH index; REDUX is a string to be removed from each xpath
- ; GPL 7/14/09 OPTIONALLY GENERATE AN XML TEMPLATE IF PASSED BY NAME
- ; TEMPLATE IS IDENTICAL TO THE PARSED XML LINE BY LINE
- ; EXCEPT THAT DATA VALUES ARE REPLACED WITH @@XPATH@@ FOR THE XPATH OF THE TAG
- ; GPL 5/24/09 AND OPTIONALLY PRODUCE THE VDX ARRAY PASSED BY NAME
- ; @VDX@("XPATH")=VALUE
- ; ex. @IZXML@("XPATH")=FIRSTLINE^LASTLINE
- ; WHERE FIRSTLINE AND LASTLINE ARE THE BEGINNING AND ENDING OF THE
- ; XML SECTION
- ; IZXML IS PASSED BY NAME
- ; IF NOINX IS SET TO 1, NO INDEX WILL BE GENERATED, BUT THE VDX WILL BE
- N I,LINE,FIRST,LAST,CUR,TMP,MDX,FOUND,CURVAL,DVDX,LCNT
- N C0CSTK ; LEAVE OUT FOR DEBUGGING
- I '$D(REDUX) S REDUX=""
- I '$D(NOINX) S NOINX=0 ; IF NOT PASSED, GENERATE AN INDEX
- N ZXML
- I NOINX S ZXML=$NA(^TMP("C0CINDEX",$J)) ; TEMP PLACE FOR INDEX TO DISCARD
- E S ZXML=IZXML ; PLACE FOR INDEX TO KEEP
- I '$D(@IZXML@(0)) D ; IF COUNT NOT IN NODE 0 COUNT THEM
- . S I="",LCNT=0
- . F S I=$O(@IZXML@(I)) Q:I="" S LCNT=LCNT+1
- E S LCNT=@IZXML@(0) ; LINE COUNT PASSED IN ARRAY
- I LCNT=0 D Q ; NO XML PASSED
- . W "ERROR IN XML FILE",!
- S DVDX=0 ; DEFAULT DO NOT PRODUCE VDX INDEX
- I $D(VDX) S DVDX=1 ; IF NAME PASSED, DO VDX
- S C0CSTK(0)=0 ; INITIALIZE STACK
- K LKASD ; KILL LOOKASIDE ARRAY
- D MKLASD(.LKASD,IZXML) ;MAKE LOOK ASIDE BUFFER FOR MULTIPLES
- F I=1:1:LCNT D ; PROCESS THE ENTIRE ARRAY
- . S LINE=@IZXML@(I)
- . I $D(TEMPLATE) D ;IF TEMPLATE IS REQUESTED
- . . S @TEMPLATE@(I)=$$CLEAN(LINE)
- . ;W LINE,!
- . S FOUND=0 ; INTIALIZED FOUND FLAG
- . I LINE?.E1"".E) D
- . . . ; THIS IS THE CASE THERE SECTION BEGINS AND ENDS
- . . . ; ON THE SAME LINE
- . . . ; W "FOUND ",LINE,!
- . . . S FOUND=1 ; SET FOUND FLAG
- . . . S CUR=$$XNAME(LINE) ; EXTRACT THE NAME
- . . . S CUR=CUR_$G(LKASD(CUR,I)) ; HANDLE MULTIPLES
- . . . D PUSH("C0CSTK",CUR) ; ADD TO THE STACK
- . . . D MKMDX("C0CSTK",.MDX,REDUX) ; GENERATE THE M INDEX
- . . . ; W "MDX=",MDX,!
- . . . I $D(@ZXML@(MDX)) D ; IN THE INDEX, IS A MULTIPLE
- . . . . ;I '$D(ZDUP(MDX)) S ZDUP(MDX)=2
- . . . . ;E S ZDUP(MDX)=ZDUP(MDX)+1
- . . . . ;W "DUP:",MDX,!
- . . . . ;I '$D(CURVAL) S CURVAL=""
- . . . . ;I DVDX S @VDX@(MDX_"["_ZDUP(MDX)_"]")=CURVAL
- . . . . S $P(@ZXML@(MDX),"^",2)=I ; UPDATE LAST LINE NUMBER
- . . . I '$D(@ZXML@(MDX)) D ; NOT IN THE INDEX, NOT A MULTIPLE
- . . . . S @ZXML@(MDX)=I_"^"_I ; ADD INDEX ENTRY-FIRST AND LAST
- . . . . S CURVAL=$$XVAL(LINE) ; VALUE
- . . . . S $P(@ZXML@(MDX),"^",3)=CURVAL ; THIRD PIECE
- . . . . I DVDX S @VDX@(MDX)=CURVAL ; FILL IN VDX ARRAY IF REQUESTED
- . . . . I $D(TEMPLATE) D ; IF TEMPLATE IS REQUESTED
- . . . . . S LINE=$$CLEAN(LINE) ; CLEAN OUT CONTROL CHARACTERS
- . . . . . S @TEMPLATE@(I)=$P(LINE,">",1)_">@@"_MDX_"@@") D ; BEGINNING OF A SECTION
- . . . ; W "FOUND ",LINE,!
- . . . S FOUND=1 ; SET FOUND FLAG
- . . . S CUR=$$XNAME(LINE) ; EXTRACT THE NAME
- . . . S CUR=CUR_$G(LKASD(CUR,I)) ; HANDLE MULTIPLES
- . . . D PUSH("C0CSTK",CUR) ; ADD TO THE STACK
- . . . D MKMDX("C0CSTK",.MDX) ; GENERATE THE M INDEX
- . . . ; W "MDX=",MDX,!
- . . . I $D(@ZXML@(MDX)) D ; IN THE INDEX, IS A MULTIPLE
- . . . . S $P(@ZXML@(MDX),"^",2)=I ; UPDATE LAST LINE NUMBER
- . . . . ;B
- . . . I '$D(@ZXML@(MDX)) D ; NOT IN THE INDEX, NOT A MULTIPLE
- . . . . S @ZXML@(MDX)=I_"^" ; INSERT INTO THE INDEX
- S @ZXML@("INDEXED")=""
- S @ZXML@("//")="1^"_LCNT ; ROOT XPATH
- I NOINX K @ZXML ; DELETE UNWANTED INDEX
- Q
- ;
-MKLASD(OUTBUF,INARY) ; CREATE A LOOKASIDE BUFFER FOR MULTILPLES
- ;
- N ZI,ZN,ZA,ZLINE,ZLINE2,CUR,CUR2
- F ZI=1:1:LCNT-1 D ; PROCESS THE ENTIRE ARRAY
- . S ZLINE=@IZXML@(ZI)
- . I ZI") D ; BEGINNING OF A SECTION
- . . . S CUR2=$$XNAME(ZLINE2) ; EXTRACT THE NAME
- . . . I CUR=CUR2 D ; IF THIS IS A MULTIPLE
- . . . . S OUTBUF(CUR,ZI+1)=""
- ;ZWR OUTBUF
- S ZI=""
- F S ZI=$O(OUTBUF(ZI)) Q:ZI="" D ; FOR EACH KIND OF MULTIPLE
- . S ZN=$O(OUTBUF(ZI,"")) ; LINE NUMBER OF SECOND MULTIPLE
- . F S ZN=$O(@IZXML@(ZN),-1) Q:ZN="" I $E($P(@IZXML@(ZN),"<"_ZI,2),1,1)=">" Q ;
- . S OUTBUF(ZI,ZN)=""
- S ZA=1,ZI="",ZN=""
- F S ZI=$O(OUTBUF(ZI)) Q:ZI="" D ; ADDING THE COUNT FOR THE MULIPLES [x]
- . S ZN="",ZA=1
- . F S ZN=$O(OUTBUF(ZI,ZN)) Q:ZN="" D ;
- . . S OUTBUF(ZI,ZN)="["_ZA_"]"
- . . S ZA=ZA+1
- Q
- ;
-CLEAN(STR,TR) ; extrinsic function; returns string
- ;; Removes all non printable characters from a string.
- ;; STR by Value
- ;; TR IS OPTIONAL TO IMPROVE PERFORMANCE
- N TR,I
- I '$D(TR) D ;
- . F I=0:1:31 S TR=$G(TR)_$C(I)
- . S TR=TR_$C(127)
- QUIT $TR(STR,TR)
- ;
-QUERY(IARY,XPATH,OARY) ; RETURNS THE XML ARRAY MATCHING THE XPATH EXPRESSION
- ; XPATH IS OF THE FORM "//FIRST/SECOND/THIRD"
- ; IARY AND OARY ARE PASSED BY NAME
- I '$D(@IARY@("INDEXED")) D ; INDEX IS NOT PRESENT IN IARY
- . D INDEX(IARY) ; GENERATE AN INDEX FOR THE XML
- N FIRST,LAST ; FIRST AND LAST LINES OF ARRAY TO RETURN
- N TMP,I,J,QXPATH
- S FIRST=1
- I '$D(@IARY@(0)) D ; LINE COUNT NOT IN ZERO NODE
- . S @IARY@(0)=$O(@IARY@("//"),-1) ; THIS SHOULD USUALLY WORK
- S LAST=@IARY@(0) ; FIRST AND LAST DEFAULT TO ROOT
- I XPATH'="//" D ; NOT A ROOT QUERY
- . S TMP=@IARY@(XPATH) ; LOOK UP LINE VALUES
- . S FIRST=$P(TMP,"^",1)
- . S LAST=$P(TMP,"^",2)
- K @OARY
- S @OARY@(0)=+LAST-FIRST+1
- S J=1
- FOR I=FIRST:1:LAST D
- . S @OARY@(J)=@IARY@(I) ; COPY THE LINE TO OARY
- . S J=J+1
- ; ZWR OARY
- Q
- ;
-XF(IDX,XPATH) ; EXTRINSIC TO RETURN THE STARTING LINE FROM AN XPATH
- ; INDEX WITH TWO PIECES START^FINISH
- ; IDX IS PASSED BY NAME
- Q $P(@IDX@(XPATH),"^",1)
- ;
-XL(IDX,XPATH) ; EXTRINSIC TO RETURN THE LAST LINE FROM AN XPATH
- ; INDEX WITH TWO PIECES START^FINISH
- ; IDX IS PASSED BY NAME
- Q $P(@IDX@(XPATH),"^",2)
- ;
-START(ISTR) ; EXTRINSIC TO RETURN THE STARTING LINE FROM AN INDEX
- ; TYPE STRING WITH THREE PIECES ARRAY;START;FINISH
- ; COMPANION TO FINISH ; IDX IS PASSED BY NAME
- Q $P(ISTR,";",2)
- ;
-FINISH(ISTR) ; EXTRINSIC TO RETURN THE LAST LINE FROM AN INDEX
- ; TYPE STRING WITH THREE PIECES ARRAY;START;FINISH
- Q $P(ISTR,";",3)
- ;
-ARRAY(ISTR) ; EXTRINSIC TO RETURN THE ARRAY REFERENCE FROM AN INDEX
- ; TYPE STRING WITH THREE PIECES ARRAY;START;FINISH
- Q $P(ISTR,";",1)
- ;
-BUILD(BLIST,BDEST) ; A COPY MACHINE THAT TAKE INSTRUCTIONS IN ARRAY BLIST
- ; WHICH HAVE ARRAY;START;FINISH AND COPIES THEM TO DEST
- ; DEST IS CLEARED TO START
- ; USES PUSH TO DO THE COPY
- N I
- K @BDEST
- F I=1:1:@BLIST@(0) D ; FOR EACH INSTRUCTION IN BLIST
- . N J,ATMP
- . S ATMP=$$ARRAY(@BLIST@(I))
- . I $G(DEBUG) W "ATMP=",ATMP,!
- . I $G(DEBUG) W @BLIST@(I),!
- . F J=$$START(@BLIST@(I)):1:$$FINISH(@BLIST@(I)) D ;
- . . ; FOR EACH LINE IN THIS INSTR
- . . I $G(DEBUG) W "BDEST= ",BDEST,!
- . . I $G(DEBUG) W "ATMP= ",@ATMP@(J),!
- . . D PUSH(BDEST,@ATMP@(J))
- Q
- ;
-QUEUE(BLST,ARRAY,FIRST,LAST) ; ADD AN ENTRY TO A BLIST
- ;
- I $G(DEBUG) W "QUEUEING ",BLST,!
- D PUSH(BLST,ARRAY_";"_FIRST_";"_LAST)
- Q
- ;
-CP(CPSRC,CPDEST) ; COPIES CPSRC TO CPDEST BOTH PASSED BY NAME
- ; KILLS CPDEST FIRST
- N CPINSTR
- I $G(DEBUG) W "MADE IT TO COPY",CPSRC,CPDEST,!
- I @CPSRC@(0)<1 D ; BAD LENGTH
- . W "ERROR IN COPY BAD SOURCE LENGTH: ",CPSRC,!
- . Q
- ; I '$D(@CPDEST@(0)) S @CPDEST@(0)=0 ; IF THE DEST IS EMPTY, INIT
- D QUEUE("CPINSTR",CPSRC,1,@CPSRC@(0)) ; BLIST FOR ENTIRE ARRAY
- D BUILD("CPINSTR",CPDEST)
- Q
- ;
-QOPEN(QOBLIST,QOXML,QOXPATH) ; ADD ALL BUT THE LAST LINE OF QOXML TO QOBLIST
- ; WARNING NEED TO DO QCLOSE FOR SAME XML BEFORE CALLING BUILD
- ; QOXPATH IS OPTIONAL - WILL OPEN INSIDE THE XPATH POINT
- ; USED TO INSERT CHILDREN NODES
- I @QOXML@(0)<1 D ; MALFORMED XML
- . W "MALFORMED XML PASSED TO QOPEN: ",QOXML,!
- . Q
- I $G(DEBUG) W "DOING QOPEN",!
- N S1,E1,QOT,QOTMP
- S S1=1 ; OPEN FROM THE BEGINNING OF THE XML
- I $D(QOXPATH) D ; XPATH PROVIDED
- . D QUERY(QOXML,QOXPATH,"QOT") ; INSURE INDEX
- . S E1=$P(@QOXML@(QOXPATH),"^",2)-1
- I '$D(QOXPATH) D ; NO XPATH PROVIDED, OPEN AT ROOT
- . S E1=@QOXML@(0)-1
- D QUEUE(QOBLIST,QOXML,S1,E1)
- ; S QOTMP=QOXML_"^"_S1_"^"_E1
- ; D PUSH(QOBLIST,QOTMP)
- Q
- ;
-QCLOSE(QCBLIST,QCXML,QCXPATH) ; CLOSE XML AFTER A QOPEN
- ; ADDS THE LIST LINE OF QCXML TO QCBLIST
- ; USED TO FINISH INSERTING CHILDERN NODES
- ; QCXPATH IS OPTIONAL - IF PROVIDED, WILL CLOSE UNTIL THE END
- ; IF QOPEN WAS CALLED WITH XPATH, QCLOSE SHOULD BE TOO
- I @QCXML@(0)<1 D ; MALFORMED XML
- . W "MALFORMED XML PASSED TO QCLOSE: ",QCXML,!
- I $G(DEBUG) W "GOING TO CLOSE",!
- N S1,E1,QCT,QCTMP
- S E1=@QCXML@(0) ; CLOSE UNTIL THE END OF THE XML
- I $D(QCXPATH) D ; XPATH PROVIDED
- . D QUERY(QCXML,QCXPATH,"QCT") ; INSURE INDEX
- . S S1=$P(@QCXML@(QCXPATH),"^",2) ; REMAINING XML
- I '$D(QCXPATH) D ; NO XPATH PROVIDED, CLOSE AT ROOT
- . S S1=@QCXML@(0)
- D QUEUE(QCBLIST,QCXML,S1,E1)
- ; D PUSH(QCBLIST,QCXML_";"_S1_";"_E1)
- Q
- ;
-INSERT(INSXML,INSNEW,INSXPATH) ; INSERT INSNEW INTO INSXML AT THE
- ; INSXPATH XPATH POINT INSXPATH IS OPTIONAL - IF IT IS
- ; OMITTED, INSERTION WILL BE AT THE ROOT
- ; NOTE INSERT IS NON DESTRUCTIVE AND WILL ADD THE NEW
- ; XML AT THE END OF THE XPATH POINT
- ; INSXML AND INSNEW ARE PASSED BY NAME INSXPATH IS A VALUE
- N INSBLD,INSTMP
- I $G(DEBUG) W "DOING INSERT ",INSXML,INSNEW,INSXPATH,!
- I $G(DEBUG) F G1=1:1:@INSXML@(0) W @INSXML@(G1),!
- I '$D(@INSXML@(1)) D ; INSERT INTO AN EMPTY ARRAY
- . D CP^C0CXPATH(INSNEW,INSXML) ; JUST COPY INTO THE OUTPUT
- I $D(@INSXML@(1)) D ; IF ORIGINAL ARRAY IS NOT EMPTY
- . I '$D(@INSXML@(0)) S @INSXML@(0)=$O(@INSXML@(""),-1) ;SET LENGTH
- . I $D(INSXPATH) D ; XPATH PROVIDED
- . . D QOPEN("INSBLD",INSXML,INSXPATH) ; COPY THE BEFORE
- . . I $G(DEBUG) D PARY^C0CXPATH("INSBLD")
- . I '$D(INSXPATH) D ; NO XPATH PROVIDED, OPEN AT ROOT
- . . D QOPEN("INSBLD",INSXML,"//") ; OPEN WITH ROOT XPATH
- . I '$D(@INSNEW@(0)) S @INSNEW@(0)=$O(@INSNEW@(""),-1) ;SIZE OF XML
- . D QUEUE("INSBLD",INSNEW,1,@INSNEW@(0)) ; COPY IN NEW XML
- . I $D(INSXPATH) D ; XPATH PROVIDED
- . . D QCLOSE("INSBLD",INSXML,INSXPATH) ; CLOSE WITH XPATH
- . I '$D(INSXPATH) D ; NO XPATH PROVIDED, CLOSE AT ROOT
- . . D QCLOSE("INSBLD",INSXML,"//") ; CLOSE WITH ROOT XPATH
- . D BUILD("INSBLD","INSTMP") ; PUT RESULTS IN INDEST
- . D CP^C0CXPATH("INSTMP",INSXML) ; COPY BUFFER TO SOURCE
- Q
- ;
-INSINNER(INNXML,INNNEW,INNXPATH) ; INSERT THE INNER XML OF INNNEW
- ; INTO INNXML AT THE INNXPATH XPATH POINT
- ;
- N INNBLD,UXPATH
- N INNTBUF
- S INNTBUF=$NA(^TMP($J,"INNTBUF"))
- I '$D(INNXPATH) D ; XPATH NOT PASSED
- . S UXPATH="//" ; USE ROOT XPATH
- I $D(INNXPATH) S UXPATH=INNXPATH ; USE THE XPATH THAT'S PASSED
- I '$D(@INNXML@(0)) D ; INNXML IS EMPTY
- . D QUEUE^C0CXPATH("INNBLD",INNNEW,2,@INNNEW@(0)-1) ; JUST INNER
- . D BUILD("INNBLD",INNXML)
- I @INNXML@(0)>0 D ; NOT EMPTY
- . D QOPEN("INNBLD",INNXML,UXPATH) ;
- . D QUEUE("INNBLD",INNNEW,2,@INNNEW@(0)-1) ; JUST INNER XML
- . D QCLOSE("INNBLD",INNXML,UXPATH)
- . D BUILD("INNBLD",INNTBUF) ; BUILD TO BUFFER
- . D CP(INNTBUF,INNXML) ; COPY BUFFER TO DEST
- Q
- ;
-INSB4(XDEST,XNEW) ; INSERT XNEW AT THE BEGINNING OF XDEST
- ; BUT XDEST AN XNEW ARE PASSED BY NAME
- N XBLD,XTMP
- D QUEUE("XBLD",XDEST,1,1) ; NEED TO PRESERVE SECTION ROOT
- D QUEUE("XBLD",XNEW,1,@XNEW@(0)) ; ALL OF NEW XML FIRST
- D QUEUE("XBLD",XDEST,2,@XDEST@(0)) ; FOLLOWED BY THE REST OF SECTION
- D BUILD("XBLD","XTMP") ; BUILD THE RESULT
- D CP("XTMP",XDEST) ; COPY TO THE DESTINATION
- I $G(DEBUG) D PARY("XDEST")
- Q
- ;
-REPLACE(REXML,RENEW,REXPATH) ; REPLACE THE XML AT THE XPATH POINT
- ; WITH RENEW - NOTE THIS WILL DELETE WHAT WAS THERE BEFORE
- ; REXML AND RENEW ARE PASSED BY NAME XPATH IS A VALUE
- ; THE DELETED XML IS PUT IN ^TMP($J,"REPLACE_OLD")
- N REBLD,XFIRST,XLAST,OLD,XNODE,RETMP
- S OLD=$NA(^TMP($J,"REPLACE_OLD"))
- D QUERY(REXML,REXPATH,OLD) ; CREATE INDEX, TEST XPATH, MAKE OLD
- S XNODE=@REXML@(REXPATH) ; PULL OUT FIRST AND LAST LINE PTRS
- S XFIRST=$P(XNODE,"^",1)
- S XLAST=$P(XNODE,"^",2)
- I RENEW="" D ; WE ARE DELETING A SECTION, MUST SAVE THE TAG
- . D QUEUE("REBLD",REXML,1,XFIRST) ; THE BEFORE
- . D QUEUE("REBLD",REXML,XLAST,@REXML@(0)) ; THE REST
- I RENEW'="" D ; NEW XML IS NOT NULL
- . D QUEUE("REBLD",REXML,1,XFIRST-1) ; THE BEFORE
- . D QUEUE("REBLD",RENEW,1,@RENEW@(0)) ; THE NEW
- . D QUEUE("REBLD",REXML,XLAST+1,@REXML@(0)) ; THE REST
- I $G(DEBUG) W "REPLACE PREBUILD",!
- I $G(DEBUG) D PARY("REBLD")
- D BUILD("REBLD","RTMP")
- K @REXML ; KILL WHAT WAS THERE
- D CP("RTMP",REXML) ; COPY IN THE RESULT
- Q
- ;
-DELETE(REXML,REXPATH) ; DELETE THE XML AT THE XPATH POINT
- ; REXML IS PASSED BY NAME XPATH IS A VALUE
- N REBLD,XFIRST,XLAST,OLD,XNODE,RETMP
- S OLD=$NA(^TMP($J,"REPLACE_OLD"))
- D QUERY(REXML,REXPATH,OLD) ; CREATE INDEX, TEST XPATH, MAKE OLD
- S XNODE=@REXML@(REXPATH) ; PULL OUT FIRST AND LAST LINE PTRS
- S XFIRST=$P(XNODE,"^",1)
- S XLAST=$P(XNODE,"^",2)
- D QUEUE("REBLD",REXML,1,XFIRST-1) ; THE BEFORE
- D QUEUE("REBLD",REXML,XLAST+1,@REXML@(0)) ; THE REST
- I $G(DEBUG) D PARY("REBLD")
- D BUILD("REBLD","RTMP")
- K @REXML ; KILL WHAT WAS THERE
- D CP("RTMP",REXML) ; COPY IN THE RESULT
- Q
- ;
-MISSING(IXML,OARY) ; SEARTH THROUGH INXLM AND PUT ANY @@X@@ VARS IN OARY
- ; W "Reporting on the missing",!
- ; W OARY
- I '$D(@IXML@(0)) W "MALFORMED XML PASSED TO MISSING",! Q
- N I
- S @OARY@(0)=0 ; INITIALIZED MISSING COUNT
- F I=1:1:@IXML@(0) D ; LOOP THROUGH WHOLE ARRAY
- . I @IXML@(I)?.E1"@@".E D ; MISSING VARIABLE HERE
- . . D PUSH^C0CXPATH(OARY,$P(@IXML@(I),"@@",2)) ; ADD TO OUTARY
- . . Q
- Q
- ;
-MAP(IXML,INARY,OXML) ; SUBSTITUTE MULTIPLE @@X@@ VARS WITH VALUES IN INARY
- ; AND PUT THE RESULTS IN OXML
- N XCNT
- I '$D(DEBUG) S DEBUG=0
- I '$D(IXML) W "MALFORMED XML PASSED TO MAP",! Q
- I '$D(@IXML@(0)) D ; INITIALIZE COUNT
- . S XCNT=$O(@IXML@(""),-1)
- E S XCNT=@IXML@(0) ;COUNT
- I $O(@INARY@(""))="" W "EMPTY ARRAY PASSED TO MAP",! Q
- N I,J,TNAM,TVAL,TSTR
- S @OXML@(0)=XCNT ; TOTAL LINES IN OUTPUT
- F I=1:1:XCNT D ; LOOP THROUGH WHOLE ARRAY
- . S @OXML@(I)=@IXML@(I) ; COPY THE LINE TO OUTPUT
- . I @OXML@(I)?.E1"@@".E D ; IS THERE A VARIABLE HERE?
- . . S TSTR=$P(@IXML@(I),"@@",1) ; INIT TO PART BEFORE VARS
- . . F J=2:2:10 D Q:$P(@IXML@(I),"@@",J+2)="" ; QUIT IF NO MORE VARS
- . . . I DEBUG W "IN MAPPING LOOP: ",TSTR,!
- . . . S TNAM=$P(@OXML@(I),"@@",J) ; EXTRACT THE VARIABLE NAME
- . . . S TVAL="@@"_$P(@IXML@(I),"@@",J)_"@@" ; DEFAULT UNCHANGED
- . . . I $D(@INARY@(TNAM)) D ; IS THE VARIABLE IN THE MAP?
- . . . . I '$D(@INARY@(TNAM,"F")) D ; NOT A SPECIAL FIELD
- . . . . . S TVAL=@INARY@(TNAM) ; PULL OUT MAPPED VALUE
- . . . . E D DOFLD ; PROCESS A FIELD
- . . . S TVAL=$$SYMENC^MXMLUTL(TVAL) ;MAKE SURE THE VALUE IS XML SAFE
- . . . S TSTR=TSTR_TVAL_$P(@IXML@(I),"@@",J+1) ; ADD VAR AND PART AFTER
- . . S @OXML@(I)=TSTR ; COPY LINE WITH MAPPED VALUES
- . . I DEBUG W TSTR
- I DEBUG W "MAPPED",!
- Q
- ;
-DOFLD ; PROCESS A FILEMAN FIELD REFERENCED BY A VARIABLE
- ;
- Q
- ;
-TRIM(THEXML) ; TAKES OUT ALL NULL ELEMENTS
- ; THEXML IS PASSED BY NAME
- N I,J,TMPXML,DEL,FOUND,INTXT
- S FOUND=0
- S INTXT=0
- I $G(DEBUG) W "DELETING EMPTY ELEMENTS",!
- F I=1:1:(@THEXML@(0)-1) D ; LOOP THROUGH ENTIRE ARRAY
- . S J=@THEXML@(I)
- . I J["" D
- . . S INTXT=1 ; IN HTML SECTION, DON'T TRIM
- . . I $G(DEBUG) W "IN HTML SECTION",!
- . N JM,JP,JPX ; JMINUS AND JPLUS
- . S JM=@THEXML@(I-1) ; LINE BEFORE
- . I JM["" S INTXT=0 ; LEFT HTML SECTION,START TRIM
- . S JP=@THEXML@(I+1) ; LINE AFTER
- . I INTXT=0 D ; IF NOT IN AN HTML SECTION
- . . S JPX=$TR(JP,"/","") ; REMOVE THE SLASH
- . . I J=JPX D ; AN EMPTY ELEMENT ON TWO LINES
- . . . I $G(DEBUG) W I,J,JP,!
- . . . S FOUND=1 ; FOUND SOMETHING TO BE DELETED
- . . . S DEL(I)="" ; SET LINE TO DELETE
- . . . S DEL(I+1)="" ; SET NEXT LINE TO DELETE
- . . I J["><" D ; AN EMPTY ELEMENT ON ONE LINE
- . . . I $G(DEBUG) W I,J,!
- . . . S FOUND=1 ; FOUND SOMETHING TO BE DELETED
- . . . S DEL(I)="" ; SET THE EMPTY LINE UP TO BE DELETED
- . . . I JM=JPX D ;
- . . . . I $G(DEBUG) W I,JM_J_JPX,!
- . . . . S DEL(I-1)=""
- . . . . S DEL(I+1)="" ; SET THE SURROUNDING LINES FOR DEL
- ; . I J'["><" D PUSH("TMPXML",J)
- I FOUND D ; NEED TO DELETE THINGS
- . F I=1:1:@THEXML@(0) D ; COPY ARRAY LEAVING OUT DELELTED LINES
- . . I '$D(DEL(I)) D ; IF THE LINE IS NOT DELETED
- . . . D PUSH("TMPXML",@THEXML@(I)) ; COPY TO TMPXML ARRAY
- . D CP("TMPXML",THEXML) ; REPLACE THE XML WITH THE COPY
- Q FOUND
- ;
-UNMARK(XSEC) ; REMOVE MARKUP FROM FIRST AND LAST LINE OF XML
- ; XSEC IS A SECTION PASSED BY NAME
- N XBLD,XTMP
- D QUEUE("XBLD",XSEC,2,@XSEC@(0)-1) ; BUILD LIST FOR INNER XML
- D BUILD("XBLD","XTMP") ; BUILD THE RESULT
- D CP("XTMP",XSEC) ; REPLACE PASSED XML
- Q
- ;
-PARY(GLO,ZN) ;PRINT AN ARRAY
- ; IF ZN=-1 NO LINE NUMBERS
- N I
- F I=1:1:@GLO@(0) D ;
- . I $G(ZN)=-1 W @GLO@(I),!
- . E W I_" "_@GLO@(I),!
- Q
- ;
-H2ARY(IARYRTN,IHASH,IPRE) ; CONVERT IHASH TO RETURN ARRAY
- ; IPRE IS OPTIONAL PREFIX FOR THE ELEMENTS. USED FOR MUPTIPLES 1^"VAR"^VALUE
- I '$D(IPRE) S IPRE=""
- N H2I S H2I=""
- ; W $O(@IHASH@(H2I)),!
- F S H2I=$O(@IHASH@(H2I)) Q:H2I="" D ; FOR EACH ELEMENT OF THE HASH
- . I $QS(H2I,$QL(H2I))="M" D Q ; SPECIAL CASE FOR MULTIPLES
- . . ;W H2I_"^"_@IHASH@(H2I),!
- . . N IH,IHI
- . . S IH=$NA(@IHASH@(H2I)) ;
- . . S IH2A=$O(@IH@("")) ; SKIP OVER MULTIPLE DISCRIPTOR
- . . S IH2=$NA(@IH@(IH2A)) ; PAST THE "M","DIRETIONS" FOR EXAMPLE
- . . S IHI="" ; INDEX INTO "M" MULTIPLES
- . . F S IHI=$O(@IH2@(IHI)) Q:IHI="" D ; FOR EACH SUB-MULTIPLE
- . . . ; W @IH@(IHI)
- . . . S IH3=$NA(@IH2@(IHI))
- . . . ; W "HEY",IH3,!
- . . . D H2ARY(.IARYRTN,IH3,IPRE_";"_IHI) ; RECURSIVE CALL - INDENTED ELEMENTS
- . . ; W IH,!
- . . ; W "C0CZZ",!
- . . ; W $NA(@IHASH@(H2I)),!
- . . Q ;
- . D PUSH(IARYRTN,IPRE_"^"_H2I_"^"_@IHASH@(H2I))
- . ; W @IARYRTN@(0),!
- Q
- ;
-XVARS(XVRTN,XVIXML) ; RETURNS AN ARRAY XVRTN OF ALL UNIQUE VARIABLES
- ; DEFINED IN INPUT XML XVIXML BY @@VAR@@
- ; XVRTN AND XVIXML ARE PASSED BY NAME
- ;
- N XVI,XVTMP,XVT
- F XVI=1:1:@XVIXML@(0) D ; FOR ALL LINES OF THE XML
- . S XVT=@XVIXML@(XVI)
- . I XVT["@@" S XVTMP($P(XVT,"@@",2))=XVI
- D H2ARY(XVRTN,"XVTMP")
- Q
- ;
-DXVARS(DXIN) ;DISPLAY ALL VARIABLES IN A TEMPLATE
- ; IF PARAMETERS ARE NULL, DEFAULTS TO CCR TEMPLATE
- ;
- N DXUSE,DTMP ; DXUSE IS NAME OF VARIABLE, DTMP IS VARIABLE IF NOT SUPPLIED
- I DXIN="CCR" D ; NEED TO GO GET CCR TEMPLATE
- . D LOAD^C0CCCR0("DTMP") ; LOAD CCR TEMPLATE INTO DXTMP
- . S DXUSE="DTMP" ; DXUSE IS NAME
- E I DXIN="CCD" D ; NEED TO GO GET CCD TEMPLATE
- . D LOAD^C0CCCD1("DTMP") ; LOAD CCR TEMPLATE INTO DXTMP
- . S DXUSE="DTMP" ; DXUSE IS NAME
- E S DXUSE=DXIN ; IF PASSED THE TEMPLATE TO USE
- N DVARS ; PUT VARIABLE NAME RESULTS IN ARRAY HERE
- D XVARS("DVARS",DXUSE) ; PULL OUT VARS
- D PARY^C0CXPATH("DVARS") ;AND DISPLAY THEM
- Q
- ;
-TEST ; Run all the test cases
- D TESTALL^C0CUNIT("C0CXPAT0")
- Q
- ;
-ZTEST(WHICH) ; RUN ONE SET OF TESTS
- N ZTMP
- S DEBUG=1
- D ZLOAD^C0CUNIT("ZTMP","C0CXPAT0")
- D ZTEST^C0CUNIT(.ZTMP,WHICH)
- Q
- ;
-TLIST ; LIST THE TESTS
- N ZTMP
- D ZLOAD^C0CUNIT("ZTMP","C0CXPAT0")
- D TLIST^C0CUNIT(.ZTMP)
- Q
- ;
+C0SXPATH ; CCDCCR/GPL - XPATH XML manipulation utilities; 6/1/08 ; 9/26/12 10:45am
+ ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
+ ;Copyright 2008-2012 George Lilly. Licensed under the terms of the GNU
+ ;General Public License See attached copy of the License.
+ ;
+ ;This program is free software; you can redistribute it and/or modify
+ ;it under the terms of the GNU General Public License as published by
+ ;the Free Software Foundation; either version 2 of the License, or
+ ;(at your option) any later version.
+ ;
+ ;This program is distributed in the hope that it will be useful,
+ ;but WITHOUT ANY WARRANTY; without even the implied warranty of
+ ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ ;GNU General Public License for more details.
+ ;
+ ;You should have received a copy of the GNU General Public License along
+ ;with this program; if not, write to the Free Software Foundation, Inc.,
+ ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ ;
+ W "This is an XML XPATH utility library",!
+ W !
+ Q
+ ;
+OUTPUT(OUTARY,OUTNAME,OUTDIR) ; WRITE AN ARRAY TO A FILE
+ ;
+ N Y
+ S Y=$$GTF^%ZISH(OUTARY,$QL(OUTARY),OUTDIR,OUTNAME)
+ I Y Q 1_U_"WROTE FILE: "_OUTNAME_" TO "_OUTDIR
+ I 'Y Q 0_U_"ERROR WRITING FILE"_OUTNAME_" TO "_OUTDIR
+ Q
+ ;
+PUSH(STK,VAL) ; pushs VAL onto STK and updates STK(0)
+ ; VAL IS A STRING AND STK IS PASSED BY NAME
+ ;
+ I '$D(@STK@(0)) S @STK@(0)=0 ; IF THE ARRAY IS EMPTY, INITIALIZE
+ S @STK@(0)=@STK@(0)+1 ; INCREMENT ARRAY DEPTH
+ S @STK@(@STK@(0))=VAL ; PUT VAL A THE END OF THE ARRAY
+ Q
+ ;
+POP(STK,VAL) ; POPS THE LAST VALUE OFF THE STK AND RETURNS IT IN VAL
+ ; VAL AND STK ARE PASSED BY REFERENCE
+ ;
+ I @STK@(0)<1 D ; IF ARRAY IS EMPTY
+ . S VAL=""
+ . S @STK@(0)=0
+ I @STK@(0)>0 D ;
+ . S VAL=@STK@(@STK@(0))
+ . K @STK@(@STK@(0))
+ . S @STK@(0)=@STK@(0)-1 ; NEW DEPTH OF THE ARRAY
+ Q
+ ;
+PUSHA(ADEST,ASRC) ; PUSH ASRC ONTO ADEST, BOTH PASSED BY NAME
+ ;
+ N ZGI
+ F ZGI=1:1:@ASRC@(0) D ; FOR ALL OF THE SOURCE ARRAY
+ . D PUSH(ADEST,@ASRC@(ZGI)) ; PUSH ONE ELEMENT
+ Q
+ ;
+MKMDX(STK,RTN,INREDUX) ; MAKES A MUMPS INDEX FROM THE ARRAY STK
+ ; RTN IS SET TO //FIRST/SECOND/THIRD FOR THREE ARRAY ELEMENTS
+ ; REDUX IS A STRING TO REMOVE FROM THE RESULT
+ S RTN=""
+ N I
+ ; W "STK= ",STK,!
+ I @STK@(0)>0 D ; IF THE ARRAY IS NOT EMPTY
+ . S RTN="//"_@STK@(1) ; FIRST ELEMENT NEEDS NO SEMICOLON
+ . I @STK@(0)>1 D ; SUBSEQUENT ELEMENTS NEED A SEMICOLON
+ . . F I=2:1:@STK@(0) S RTN=RTN_"/"_@STK@(I)
+ I $G(INREDUX)'="" S RTN=$P(RTN,INREDUX,1)_$P(RTN,INREDUX,2)
+ Q
+ ;
+XNAME(ISTR) ; FUNCTION TO EXTRACT A NAME FROM AN XML FRAG
+ ; AND WILL RETURN NAME
+ ; ISTR IS PASSED BY VALUE
+ N CUR,TMP
+ I ISTR?.E1"<".E D ; STRIP OFF LEFT BRACKET
+ . S TMP=$P(ISTR,"<",2)
+ I TMP?1"/".E D ; ALSO STRIP OFF SLASH IF PRESENT IE
+ . S TMP=$P(TMP,"/",2)
+ S CUR=$P(TMP,">",1) ; EXTRACT THE NAME
+ ; W "CUR= ",CUR,!
+ I CUR?.1"_"1.A1" ".E D ; CONTAINS A BLANK IE NAME ID=TEST>
+ . S CUR=$P(CUR," ",1) ; STRIP OUT BLANK AND AFTER
+ ; W "CUR2= ",CUR,!
+ Q CUR
+ ;
+XVAL(ISTR) ; EXTRACTS THE VALUE FROM A FRAGMENT OF XML
+ ; VALUE WILL RETURN VALUE
+ N G
+ S G=$P(ISTR,">",2) ;STRIP OFF
+ Q $P(G,"<",1) ; STRIP OFF LEAVING VALUE
+ ;
+VDX2VDV(OUTVDV,INVDX) ; CONVERT AN VDX ARRAY TO VDV
+ ; VDX: @INVDX@(XPATH)=VALUE
+ ; VDV: @OUTVDV@(X1X2X3X4)=VALUE
+ ; THE VDV DATANAMES MIGHT BE MORE CONVENIENT FOR USE IN CODE
+ ; AN INDEX IS PROVIDED TO GO BACK TO VDX FOR CONVERSIONS
+ ; @VDV@("XPATH",X1X2X3X4)="XPATH"
+ N ZA,ZI,ZW
+ S ZI=""
+ F S ZI=$O(@INVDX@(ZI)) Q:ZI="" D ;
+ . S ZW=$TR(ZI,"/","") ; ELIMINATE ALL SLASHES - CAMEL CASE VARIABLE NAME
+ . W ZW,!
+ . S @OUTVDV@(ZW)=@INVDX@(ZI)
+ . S @OUTVDV@("XPATH",ZW)=ZI
+ Q
+ ;
+VDX2XPG(OUTXPG,INVDX) ; CONVERT AN VDX ARRAY TO XPG
+ ; VDX: @VDX@(XPATH)=VALUE
+ ; XPG: @(VDX(X1,X2,X3,X4))@=VALUE
+ ; THIS IS A STEP TOWARD GENERATING XML FROM A VDX
+ N ZA,ZI,ZW
+ S ZI=""
+ F S ZI=$O(@INVDX@(ZI)) Q:ZI="" D ;
+ . S ZW=$E(ZI,3,$L(ZI)) ; STRIP OFF INITIAL //
+ . S ZW2=$P(ZW,"/",1)
+ . F ZK=1:1:$L(ZW,"/") D PUSH("ZA",$P(ZW,"/",ZK))
+ . ;ZWR ZA
+ . S ZW2=ZA(1)
+ . F ZK=2:1:ZA(0) D ;
+ . . S ZW2=ZW2_""","""_ZA(ZK)
+ . K ZA
+ . S ZW2=""""_ZW2_""""
+ . W ZW2,!
+ . S ZN=OUTXPG_"("_ZW2_")"
+ . S @ZN=@INVDX@(ZI)
+ Q
+ ;
+XML2XPG(OUTXPG,INXML) ; CONVERT AN XML ARRAY, PASSED BY NAME TO AN XPG ARRAY
+ ; XPG MEANS XPATH GLOBAL AND HAS THE FORM @OUTXPG@("X1","X2","X3")=VALUE
+ ;
+ ;N G1
+ D INDEX(INXML,"G1",1) ; PRODUCES A VDX ARRAY IN G1, NO INDEX IS PRODUCED
+ D VDX2XPG(OUTXPG,"G1") ; CONVERTS THE VDX ARRAY TO XPG FORM
+ Q
+ ;
+DO
+ D XPG2XML("^GPL2B","^GPL2A")
+ Q
+ ;
+T1 ; TEST OUT THESE ROUTINES
+ D XML2XPG("G2","^GPL")
+ D XPG2XML("G3","G2")
+ K ^GPLOUT
+ M ^GPLOUT=G3
+ W $$OUTPUT^C0CXPATH("^GPLOUT(1)","GPLTEST.xml","/home/vademo2/EHR/p")
+ Q
+ ;
+XPG2XML(OUTXML,INXPG) ;
+ N C0CN,FWD,ZA,G,GA,ZQ
+ S ZQ=0 ; QUIT FLAG
+ F Q:ZQ=1 D ; LOOP THROUGH EVERYTHING
+ . I '$D(C0CN) D ; FIRST TIME THROUGH
+ . . K @OUTXML ; MAKE SURE OUTPUT ARRAY IS CLEAR
+ . . S FWD=1 ; START OUT GOING FORWARD THROUGH SUBSCRIPTS
+ . . S G=$Q(@INXPG) ; THIS ONE
+ . . S GN=$Q(@G) ; NEXT ONE
+ . . S C0CN=1 ; SUBSCRIPT COUNT
+ . . S ZQ=0 ; QUIT FLAG
+ . . D ZXO("?xml version=""1.0"" encoding=""UTF-8""?") ;MAKE IT REAL XML
+ . . I $QS(G,1)="ContinuityOfCareRecord" D ;
+ . . . D ZXO("?xml-stylesheet type=""text/xsl"" href=""ccr.xsl""?") ; HACK TO MAKE THE CCR STYLESHEET WORK
+ . I FWD D ; GOING FORWARDS
+ . . I C0CN<$QL(G) D ; NOT A DATA NODE
+ . . . S ZA=$QS(G,C0CN) ; PULL OUT THE SUBSCRIPT
+ . . . D ZXO(ZA) ; AND OPEN AN XML ELEMENT
+ . . . I @OUTXML@(@OUTXML@(0))="" D ;
+ . . . . S @OUTXML@(@OUTXML@(0))=""
+ . . . S C0CN=C0CN+1 ; MOVE TO THE NEXT ONE
+ . . E D ; AT THE DATA NODE
+ . . . S ZA=$QS(G,C0CN) ; PULL OUT THE SUBSCRIPT
+ . . . D ZXVAL(ZA,@G) ; OUTPUT VAL FOR DATA NODE
+ . . . S FWD=0 ; GO BACKWARDS
+ . I 'FWD D ;GOING BACKWARDS
+ . . S GN=$Q(@G) ;NEXT XPATH
+ . . ;W "NEXT!",GN,!
+ . . S C0CN=C0CN-1 ; PREVIOUS SUBSCRIPT
+ . . I GN'="" D ;
+ . . . I $QS(G,C0CN)'=$QS(GN,C0CN) D ; NEED TO CLOSE OFF ELEMENT
+ . . . . D ZXC($QS(G,C0CN)) ;
+ . . . E I GN'="" D ; MORE ELEMENTS AT THIS LEVEL
+ . . . . S G=$Q(@G) ; ADVANCE TO NEW XPATH
+ . . . . S C0CN=C0CN+1 ; GET READY TO PROCESS NEXT SUBSCRIPT
+ . . . . S FWD=1 ; GOING FORWARD NOW
+ . I (GN="")&(C0CN=1) D Q ; WHEN WE ARE ALL DONE
+ . . D ZXC($QS(G,C0CN)) ; LAST ONE
+ . . S ZQ=1 ; QUIT NOW
+ Q
+ ;
+ZXO(WHAT)
+ D PUSH("GA",WHAT)
+ D PUSH(OUTXML,"<"_WHAT_">")
+ Q
+ ;
+ZXC(WHAT)
+ D POP("GA",.TMP)
+ D PUSH(OUTXML,"")
+ Q
+ ;
+ZXVAL(WHAT,VAL)
+ D PUSH(OUTXML,"<"_WHAT_">"_VAL_"")
+ Q
+ ;
+INDEX(IZXML,VDX,NOINX,TEMPLATE,REDUX) ; parse XML in IZXML and produce
+ ; an XPATH index; REDUX is a string to be removed from each xpath
+ ; GPL 7/14/09 OPTIONALLY GENERATE AN XML TEMPLATE IF PASSED BY NAME
+ ; TEMPLATE IS IDENTICAL TO THE PARSED XML LINE BY LINE
+ ; EXCEPT THAT DATA VALUES ARE REPLACED WITH @@XPATH@@ FOR THE XPATH OF THE TAG
+ ; GPL 5/24/09 AND OPTIONALLY PRODUCE THE VDX ARRAY PASSED BY NAME
+ ; @VDX@("XPATH")=VALUE
+ ; ex. @IZXML@("XPATH")=FIRSTLINE^LASTLINE
+ ; WHERE FIRSTLINE AND LASTLINE ARE THE BEGINNING AND ENDING OF THE
+ ; XML SECTION
+ ; IZXML IS PASSED BY NAME
+ ; IF NOINX IS SET TO 1, NO INDEX WILL BE GENERATED, BUT THE VDX WILL BE
+ N I,LINE,FIRST,LAST,CUR,TMP,MDX,FOUND,CURVAL,DVDX,LCNT
+ N C0CSTK ; LEAVE OUT FOR DEBUGGING
+ I '$D(REDUX) S REDUX=""
+ I '$D(NOINX) S NOINX=0 ; IF NOT PASSED, GENERATE AN INDEX
+ N ZXML
+ I NOINX S ZXML=$NA(^TMP("C0CINDEX",$J)) ; TEMP PLACE FOR INDEX TO DISCARD
+ E S ZXML=IZXML ; PLACE FOR INDEX TO KEEP
+ I '$D(@IZXML@(0)) D ; IF COUNT NOT IN NODE 0 COUNT THEM
+ . S I="",LCNT=0
+ . F S I=$O(@IZXML@(I)) Q:I="" S LCNT=LCNT+1
+ E S LCNT=@IZXML@(0) ; LINE COUNT PASSED IN ARRAY
+ I LCNT=0 D Q ; NO XML PASSED
+ . W "ERROR IN XML FILE",!
+ S DVDX=0 ; DEFAULT DO NOT PRODUCE VDX INDEX
+ I $D(VDX) S DVDX=1 ; IF NAME PASSED, DO VDX
+ S C0CSTK(0)=0 ; INITIALIZE STACK
+ K LKASD ; KILL LOOKASIDE ARRAY
+ D MKLASD(.LKASD,IZXML) ;MAKE LOOK ASIDE BUFFER FOR MULTIPLES
+ F I=1:1:LCNT D ; PROCESS THE ENTIRE ARRAY
+ . S LINE=@IZXML@(I)
+ . I $D(TEMPLATE) D ;IF TEMPLATE IS REQUESTED
+ . . S @TEMPLATE@(I)=$$CLEAN(LINE)
+ . ;W LINE,!
+ . S FOUND=0 ; INTIALIZED FOUND FLAG
+ . I LINE?.E1"".E) D
+ . . . ; THIS IS THE CASE THERE SECTION BEGINS AND ENDS
+ . . . ; ON THE SAME LINE
+ . . . ; W "FOUND ",LINE,!
+ . . . S FOUND=1 ; SET FOUND FLAG
+ . . . S CUR=$$XNAME(LINE) ; EXTRACT THE NAME
+ . . . S CUR=CUR_$G(LKASD(CUR,I)) ; HANDLE MULTIPLES
+ . . . D PUSH("C0CSTK",CUR) ; ADD TO THE STACK
+ . . . D MKMDX("C0CSTK",.MDX,REDUX) ; GENERATE THE M INDEX
+ . . . ; W "MDX=",MDX,!
+ . . . I $D(@ZXML@(MDX)) D ; IN THE INDEX, IS A MULTIPLE
+ . . . . ;I '$D(ZDUP(MDX)) S ZDUP(MDX)=2
+ . . . . ;E S ZDUP(MDX)=ZDUP(MDX)+1
+ . . . . ;W "DUP:",MDX,!
+ . . . . ;I '$D(CURVAL) S CURVAL=""
+ . . . . ;I DVDX S @VDX@(MDX_"["_ZDUP(MDX)_"]")=CURVAL
+ . . . . S $P(@ZXML@(MDX),"^",2)=I ; UPDATE LAST LINE NUMBER
+ . . . I '$D(@ZXML@(MDX)) D ; NOT IN THE INDEX, NOT A MULTIPLE
+ . . . . S @ZXML@(MDX)=I_"^"_I ; ADD INDEX ENTRY-FIRST AND LAST
+ . . . . S CURVAL=$$XVAL(LINE) ; VALUE
+ . . . . S $P(@ZXML@(MDX),"^",3)=CURVAL ; THIRD PIECE
+ . . . . I DVDX S @VDX@(MDX)=CURVAL ; FILL IN VDX ARRAY IF REQUESTED
+ . . . . I $D(TEMPLATE) D ; IF TEMPLATE IS REQUESTED
+ . . . . . S LINE=$$CLEAN(LINE) ; CLEAN OUT CONTROL CHARACTERS
+ . . . . . S @TEMPLATE@(I)=$P(LINE,">",1)_">@@"_MDX_"@@") D ; BEGINNING OF A SECTION
+ . . . ; W "FOUND ",LINE,!
+ . . . S FOUND=1 ; SET FOUND FLAG
+ . . . S CUR=$$XNAME(LINE) ; EXTRACT THE NAME
+ . . . S CUR=CUR_$G(LKASD(CUR,I)) ; HANDLE MULTIPLES
+ . . . D PUSH("C0CSTK",CUR) ; ADD TO THE STACK
+ . . . D MKMDX("C0CSTK",.MDX) ; GENERATE THE M INDEX
+ . . . ; W "MDX=",MDX,!
+ . . . I $D(@ZXML@(MDX)) D ; IN THE INDEX, IS A MULTIPLE
+ . . . . S $P(@ZXML@(MDX),"^",2)=I ; UPDATE LAST LINE NUMBER
+ . . . . ;B
+ . . . I '$D(@ZXML@(MDX)) D ; NOT IN THE INDEX, NOT A MULTIPLE
+ . . . . S @ZXML@(MDX)=I_"^" ; INSERT INTO THE INDEX
+ S @ZXML@("INDEXED")=""
+ S @ZXML@("//")="1^"_LCNT ; ROOT XPATH
+ I NOINX K @ZXML ; DELETE UNWANTED INDEX
+ Q
+ ;
+MKLASD(OUTBUF,INARY) ; CREATE A LOOKASIDE BUFFER FOR MULTILPLES
+ ;
+ N ZI,ZN,ZA,ZLINE,ZLINE2,CUR,CUR2
+ F ZI=1:1:LCNT-1 D ; PROCESS THE ENTIRE ARRAY
+ . S ZLINE=@IZXML@(ZI)
+ . I ZI") D ; BEGINNING OF A SECTION
+ . . . S CUR2=$$XNAME(ZLINE2) ; EXTRACT THE NAME
+ . . . I CUR=CUR2 D ; IF THIS IS A MULTIPLE
+ . . . . S OUTBUF(CUR,ZI+1)=""
+ ;ZWR OUTBUF
+ S ZI=""
+ F S ZI=$O(OUTBUF(ZI)) Q:ZI="" D ; FOR EACH KIND OF MULTIPLE
+ . S ZN=$O(OUTBUF(ZI,"")) ; LINE NUMBER OF SECOND MULTIPLE
+ . F S ZN=$O(@IZXML@(ZN),-1) Q:ZN="" I $E($P(@IZXML@(ZN),"<"_ZI,2),1,1)=">" Q ;
+ . S OUTBUF(ZI,ZN)=""
+ S ZA=1,ZI="",ZN=""
+ F S ZI=$O(OUTBUF(ZI)) Q:ZI="" D ; ADDING THE COUNT FOR THE MULIPLES [x]
+ . S ZN="",ZA=1
+ . F S ZN=$O(OUTBUF(ZI,ZN)) Q:ZN="" D ;
+ . . S OUTBUF(ZI,ZN)="["_ZA_"]"
+ . . S ZA=ZA+1
+ Q
+ ;
+CLEAN(STR,TR) ; extrinsic function; returns string
+ ;; Removes all non printable characters from a string.
+ ;; STR by Value
+ ;; TR IS OPTIONAL TO IMPROVE PERFORMANCE
+ N TR,I
+ I '$D(TR) D ;
+ . F I=0:1:31 S TR=$G(TR)_$C(I)
+ . S TR=TR_$C(127)
+ QUIT $TR(STR,TR)
+ ;
+QUERY(IARY,XPATH,OARY) ; RETURNS THE XML ARRAY MATCHING THE XPATH EXPRESSION
+ ; XPATH IS OF THE FORM "//FIRST/SECOND/THIRD"
+ ; IARY AND OARY ARE PASSED BY NAME
+ I '$D(@IARY@("INDEXED")) D ; INDEX IS NOT PRESENT IN IARY
+ . D INDEX(IARY) ; GENERATE AN INDEX FOR THE XML
+ N FIRST,LAST ; FIRST AND LAST LINES OF ARRAY TO RETURN
+ N TMP,I,J,QXPATH
+ S FIRST=1
+ I '$D(@IARY@(0)) D ; LINE COUNT NOT IN ZERO NODE
+ . S @IARY@(0)=$O(@IARY@("//"),-1) ; THIS SHOULD USUALLY WORK
+ S LAST=@IARY@(0) ; FIRST AND LAST DEFAULT TO ROOT
+ I XPATH'="//" D ; NOT A ROOT QUERY
+ . S TMP=@IARY@(XPATH) ; LOOK UP LINE VALUES
+ . S FIRST=$P(TMP,"^",1)
+ . S LAST=$P(TMP,"^",2)
+ K @OARY
+ S @OARY@(0)=+LAST-FIRST+1
+ S J=1
+ FOR I=FIRST:1:LAST D
+ . S @OARY@(J)=@IARY@(I) ; COPY THE LINE TO OARY
+ . S J=J+1
+ ; ZWR OARY
+ Q
+ ;
+XF(IDX,XPATH) ; EXTRINSIC TO RETURN THE STARTING LINE FROM AN XPATH
+ ; INDEX WITH TWO PIECES START^FINISH
+ ; IDX IS PASSED BY NAME
+ Q $P(@IDX@(XPATH),"^",1)
+ ;
+XL(IDX,XPATH) ; EXTRINSIC TO RETURN THE LAST LINE FROM AN XPATH
+ ; INDEX WITH TWO PIECES START^FINISH
+ ; IDX IS PASSED BY NAME
+ Q $P(@IDX@(XPATH),"^",2)
+ ;
+START(ISTR) ; EXTRINSIC TO RETURN THE STARTING LINE FROM AN INDEX
+ ; TYPE STRING WITH THREE PIECES ARRAY;START;FINISH
+ ; COMPANION TO FINISH ; IDX IS PASSED BY NAME
+ Q $P(ISTR,";",2)
+ ;
+FINISH(ISTR) ; EXTRINSIC TO RETURN THE LAST LINE FROM AN INDEX
+ ; TYPE STRING WITH THREE PIECES ARRAY;START;FINISH
+ Q $P(ISTR,";",3)
+ ;
+ARRAY(ISTR) ; EXTRINSIC TO RETURN THE ARRAY REFERENCE FROM AN INDEX
+ ; TYPE STRING WITH THREE PIECES ARRAY;START;FINISH
+ Q $P(ISTR,";",1)
+ ;
+BUILD(BLIST,BDEST) ; A COPY MACHINE THAT TAKE INSTRUCTIONS IN ARRAY BLIST
+ ; WHICH HAVE ARRAY;START;FINISH AND COPIES THEM TO DEST
+ ; DEST IS CLEARED TO START
+ ; USES PUSH TO DO THE COPY
+ N I
+ K @BDEST
+ F I=1:1:@BLIST@(0) D ; FOR EACH INSTRUCTION IN BLIST
+ . N J,ATMP
+ . S ATMP=$$ARRAY(@BLIST@(I))
+ . I $G(DEBUG) W "ATMP=",ATMP,!
+ . I $G(DEBUG) W @BLIST@(I),!
+ . F J=$$START(@BLIST@(I)):1:$$FINISH(@BLIST@(I)) D ;
+ . . ; FOR EACH LINE IN THIS INSTR
+ . . I $G(DEBUG) W "BDEST= ",BDEST,!
+ . . I $G(DEBUG) W "ATMP= ",@ATMP@(J),!
+ . . D PUSH(BDEST,@ATMP@(J))
+ Q
+ ;
+QUEUE(BLST,ARRAY,FIRST,LAST) ; ADD AN ENTRY TO A BLIST
+ ;
+ I $G(DEBUG) W "QUEUEING ",BLST,!
+ D PUSH(BLST,ARRAY_";"_FIRST_";"_LAST)
+ Q
+ ;
+CP(CPSRC,CPDEST) ; COPIES CPSRC TO CPDEST BOTH PASSED BY NAME
+ ; KILLS CPDEST FIRST
+ N CPINSTR
+ I $G(DEBUG) W "MADE IT TO COPY",CPSRC,CPDEST,!
+ I @CPSRC@(0)<1 D ; BAD LENGTH
+ . W "ERROR IN COPY BAD SOURCE LENGTH: ",CPSRC,!
+ . Q
+ ; I '$D(@CPDEST@(0)) S @CPDEST@(0)=0 ; IF THE DEST IS EMPTY, INIT
+ D QUEUE("CPINSTR",CPSRC,1,@CPSRC@(0)) ; BLIST FOR ENTIRE ARRAY
+ D BUILD("CPINSTR",CPDEST)
+ Q
+ ;
+QOPEN(QOBLIST,QOXML,QOXPATH) ; ADD ALL BUT THE LAST LINE OF QOXML TO QOBLIST
+ ; WARNING NEED TO DO QCLOSE FOR SAME XML BEFORE CALLING BUILD
+ ; QOXPATH IS OPTIONAL - WILL OPEN INSIDE THE XPATH POINT
+ ; USED TO INSERT CHILDREN NODES
+ I @QOXML@(0)<1 D ; MALFORMED XML
+ . W "MALFORMED XML PASSED TO QOPEN: ",QOXML,!
+ . Q
+ I $G(DEBUG) W "DOING QOPEN",!
+ N S1,E1,QOT,QOTMP
+ S S1=1 ; OPEN FROM THE BEGINNING OF THE XML
+ I $D(QOXPATH) D ; XPATH PROVIDED
+ . D QUERY(QOXML,QOXPATH,"QOT") ; INSURE INDEX
+ . S E1=$P(@QOXML@(QOXPATH),"^",2)-1
+ I '$D(QOXPATH) D ; NO XPATH PROVIDED, OPEN AT ROOT
+ . S E1=@QOXML@(0)-1
+ D QUEUE(QOBLIST,QOXML,S1,E1)
+ ; S QOTMP=QOXML_"^"_S1_"^"_E1
+ ; D PUSH(QOBLIST,QOTMP)
+ Q
+ ;
+QCLOSE(QCBLIST,QCXML,QCXPATH) ; CLOSE XML AFTER A QOPEN
+ ; ADDS THE LIST LINE OF QCXML TO QCBLIST
+ ; USED TO FINISH INSERTING CHILDERN NODES
+ ; QCXPATH IS OPTIONAL - IF PROVIDED, WILL CLOSE UNTIL THE END
+ ; IF QOPEN WAS CALLED WITH XPATH, QCLOSE SHOULD BE TOO
+ I @QCXML@(0)<1 D ; MALFORMED XML
+ . W "MALFORMED XML PASSED TO QCLOSE: ",QCXML,!
+ I $G(DEBUG) W "GOING TO CLOSE",!
+ N S1,E1,QCT,QCTMP
+ S E1=@QCXML@(0) ; CLOSE UNTIL THE END OF THE XML
+ I $D(QCXPATH) D ; XPATH PROVIDED
+ . D QUERY(QCXML,QCXPATH,"QCT") ; INSURE INDEX
+ . S S1=$P(@QCXML@(QCXPATH),"^",2) ; REMAINING XML
+ I '$D(QCXPATH) D ; NO XPATH PROVIDED, CLOSE AT ROOT
+ . S S1=@QCXML@(0)
+ D QUEUE(QCBLIST,QCXML,S1,E1)
+ ; D PUSH(QCBLIST,QCXML_";"_S1_";"_E1)
+ Q
+ ;
+INSERT(INSXML,INSNEW,INSXPATH) ; INSERT INSNEW INTO INSXML AT THE
+ ; INSXPATH XPATH POINT INSXPATH IS OPTIONAL - IF IT IS
+ ; OMITTED, INSERTION WILL BE AT THE ROOT
+ ; NOTE INSERT IS NON DESTRUCTIVE AND WILL ADD THE NEW
+ ; XML AT THE END OF THE XPATH POINT
+ ; INSXML AND INSNEW ARE PASSED BY NAME INSXPATH IS A VALUE
+ N INSBLD,INSTMP
+ I $G(DEBUG) W "DOING INSERT ",INSXML,INSNEW,INSXPATH,!
+ I $G(DEBUG) F G1=1:1:@INSXML@(0) W @INSXML@(G1),!
+ I '$D(@INSXML@(1)) D ; INSERT INTO AN EMPTY ARRAY
+ . D CP^C0CXPATH(INSNEW,INSXML) ; JUST COPY INTO THE OUTPUT
+ I $D(@INSXML@(1)) D ; IF ORIGINAL ARRAY IS NOT EMPTY
+ . I '$D(@INSXML@(0)) S @INSXML@(0)=$O(@INSXML@(""),-1) ;SET LENGTH
+ . I $D(INSXPATH) D ; XPATH PROVIDED
+ . . D QOPEN("INSBLD",INSXML,INSXPATH) ; COPY THE BEFORE
+ . . I $G(DEBUG) D PARY^C0CXPATH("INSBLD")
+ . I '$D(INSXPATH) D ; NO XPATH PROVIDED, OPEN AT ROOT
+ . . D QOPEN("INSBLD",INSXML,"//") ; OPEN WITH ROOT XPATH
+ . I '$D(@INSNEW@(0)) S @INSNEW@(0)=$O(@INSNEW@(""),-1) ;SIZE OF XML
+ . D QUEUE("INSBLD",INSNEW,1,@INSNEW@(0)) ; COPY IN NEW XML
+ . I $D(INSXPATH) D ; XPATH PROVIDED
+ . . D QCLOSE("INSBLD",INSXML,INSXPATH) ; CLOSE WITH XPATH
+ . I '$D(INSXPATH) D ; NO XPATH PROVIDED, CLOSE AT ROOT
+ . . D QCLOSE("INSBLD",INSXML,"//") ; CLOSE WITH ROOT XPATH
+ . D BUILD("INSBLD","INSTMP") ; PUT RESULTS IN INDEST
+ . D CP^C0CXPATH("INSTMP",INSXML) ; COPY BUFFER TO SOURCE
+ Q
+ ;
+INSINNER(INNXML,INNNEW,INNXPATH) ; INSERT THE INNER XML OF INNNEW
+ ; INTO INNXML AT THE INNXPATH XPATH POINT
+ ;
+ N INNBLD,UXPATH
+ N INNTBUF
+ S INNTBUF=$NA(^TMP($J,"INNTBUF"))
+ I '$D(INNXPATH) D ; XPATH NOT PASSED
+ . S UXPATH="//" ; USE ROOT XPATH
+ I $D(INNXPATH) S UXPATH=INNXPATH ; USE THE XPATH THAT'S PASSED
+ I '$D(@INNXML@(0)) D ; INNXML IS EMPTY
+ . D QUEUE^C0CXPATH("INNBLD",INNNEW,2,@INNNEW@(0)-1) ; JUST INNER
+ . D BUILD("INNBLD",INNXML)
+ I @INNXML@(0)>0 D ; NOT EMPTY
+ . D QOPEN("INNBLD",INNXML,UXPATH) ;
+ . D QUEUE("INNBLD",INNNEW,2,@INNNEW@(0)-1) ; JUST INNER XML
+ . D QCLOSE("INNBLD",INNXML,UXPATH)
+ . D BUILD("INNBLD",INNTBUF) ; BUILD TO BUFFER
+ . D CP(INNTBUF,INNXML) ; COPY BUFFER TO DEST
+ Q
+ ;
+INSB4(XDEST,XNEW) ; INSERT XNEW AT THE BEGINNING OF XDEST
+ ; BUT XDEST AN XNEW ARE PASSED BY NAME
+ N XBLD,XTMP
+ D QUEUE("XBLD",XDEST,1,1) ; NEED TO PRESERVE SECTION ROOT
+ D QUEUE("XBLD",XNEW,1,@XNEW@(0)) ; ALL OF NEW XML FIRST
+ D QUEUE("XBLD",XDEST,2,@XDEST@(0)) ; FOLLOWED BY THE REST OF SECTION
+ D BUILD("XBLD","XTMP") ; BUILD THE RESULT
+ D CP("XTMP",XDEST) ; COPY TO THE DESTINATION
+ I $G(DEBUG) D PARY("XDEST")
+ Q
+ ;
+REPLACE(REXML,RENEW,REXPATH) ; REPLACE THE XML AT THE XPATH POINT
+ ; WITH RENEW - NOTE THIS WILL DELETE WHAT WAS THERE BEFORE
+ ; REXML AND RENEW ARE PASSED BY NAME XPATH IS A VALUE
+ ; THE DELETED XML IS PUT IN ^TMP($J,"REPLACE_OLD")
+ N REBLD,XFIRST,XLAST,OLD,XNODE,RETMP
+ S OLD=$NA(^TMP($J,"REPLACE_OLD"))
+ D QUERY(REXML,REXPATH,OLD) ; CREATE INDEX, TEST XPATH, MAKE OLD
+ S XNODE=@REXML@(REXPATH) ; PULL OUT FIRST AND LAST LINE PTRS
+ S XFIRST=$P(XNODE,"^",1)
+ S XLAST=$P(XNODE,"^",2)
+ I RENEW="" D ; WE ARE DELETING A SECTION, MUST SAVE THE TAG
+ . D QUEUE("REBLD",REXML,1,XFIRST) ; THE BEFORE
+ . D QUEUE("REBLD",REXML,XLAST,@REXML@(0)) ; THE REST
+ I RENEW'="" D ; NEW XML IS NOT NULL
+ . D QUEUE("REBLD",REXML,1,XFIRST-1) ; THE BEFORE
+ . D QUEUE("REBLD",RENEW,1,@RENEW@(0)) ; THE NEW
+ . D QUEUE("REBLD",REXML,XLAST+1,@REXML@(0)) ; THE REST
+ I $G(DEBUG) W "REPLACE PREBUILD",!
+ I $G(DEBUG) D PARY("REBLD")
+ D BUILD("REBLD","RTMP")
+ K @REXML ; KILL WHAT WAS THERE
+ D CP("RTMP",REXML) ; COPY IN THE RESULT
+ Q
+ ;
+DELETE(REXML,REXPATH) ; DELETE THE XML AT THE XPATH POINT
+ ; REXML IS PASSED BY NAME XPATH IS A VALUE
+ N REBLD,XFIRST,XLAST,OLD,XNODE,RETMP
+ S OLD=$NA(^TMP($J,"REPLACE_OLD"))
+ D QUERY(REXML,REXPATH,OLD) ; CREATE INDEX, TEST XPATH, MAKE OLD
+ S XNODE=@REXML@(REXPATH) ; PULL OUT FIRST AND LAST LINE PTRS
+ S XFIRST=$P(XNODE,"^",1)
+ S XLAST=$P(XNODE,"^",2)
+ D QUEUE("REBLD",REXML,1,XFIRST-1) ; THE BEFORE
+ D QUEUE("REBLD",REXML,XLAST+1,@REXML@(0)) ; THE REST
+ I $G(DEBUG) D PARY("REBLD")
+ D BUILD("REBLD","RTMP")
+ K @REXML ; KILL WHAT WAS THERE
+ D CP("RTMP",REXML) ; COPY IN THE RESULT
+ Q
+ ;
+MISSING(IXML,OARY) ; SEARTH THROUGH INXLM AND PUT ANY @@X@@ VARS IN OARY
+ ; W "Reporting on the missing",!
+ ; W OARY
+ I '$D(@IXML@(0)) W "MALFORMED XML PASSED TO MISSING",! Q
+ N I
+ S @OARY@(0)=0 ; INITIALIZED MISSING COUNT
+ F I=1:1:@IXML@(0) D ; LOOP THROUGH WHOLE ARRAY
+ . I @IXML@(I)?.E1"@@".E D ; MISSING VARIABLE HERE
+ . . D PUSH^C0CXPATH(OARY,$P(@IXML@(I),"@@",2)) ; ADD TO OUTARY
+ . . Q
+ Q
+ ;
+MAP(IXML,INARY,OXML) ; SUBSTITUTE MULTIPLE @@X@@ VARS WITH VALUES IN INARY
+ ; AND PUT THE RESULTS IN OXML
+ N XCNT
+ I '$D(DEBUG) S DEBUG=0
+ I '$D(IXML) W "MALFORMED XML PASSED TO MAP",! Q
+ I '$D(@IXML@(0)) D ; INITIALIZE COUNT
+ . S XCNT=$O(@IXML@(""),-1)
+ E S XCNT=@IXML@(0) ;COUNT
+ I $O(@INARY@(""))="" W "EMPTY ARRAY PASSED TO MAP",! Q
+ N I,J,TNAM,TVAL,TSTR
+ S @OXML@(0)=XCNT ; TOTAL LINES IN OUTPUT
+ F I=1:1:XCNT D ; LOOP THROUGH WHOLE ARRAY
+ . S @OXML@(I)=@IXML@(I) ; COPY THE LINE TO OUTPUT
+ . I @OXML@(I)?.E1"@@".E D ; IS THERE A VARIABLE HERE?
+ . . S TSTR=$P(@IXML@(I),"@@",1) ; INIT TO PART BEFORE VARS
+ . . F J=2:2:10 D Q:$P(@IXML@(I),"@@",J+2)="" ; QUIT IF NO MORE VARS
+ . . . I DEBUG W "IN MAPPING LOOP: ",TSTR,!
+ . . . S TNAM=$P(@OXML@(I),"@@",J) ; EXTRACT THE VARIABLE NAME
+ . . . S TVAL="@@"_$P(@IXML@(I),"@@",J)_"@@" ; DEFAULT UNCHANGED
+ . . . I $D(@INARY@(TNAM)) D ; IS THE VARIABLE IN THE MAP?
+ . . . . I '$D(@INARY@(TNAM,"F")) D ; NOT A SPECIAL FIELD
+ . . . . . S TVAL=@INARY@(TNAM) ; PULL OUT MAPPED VALUE
+ . . . . E D DOFLD ; PROCESS A FIELD
+ . . . S TVAL=$$SYMENC^MXMLUTL(TVAL) ;MAKE SURE THE VALUE IS XML SAFE
+ . . . S TSTR=TSTR_TVAL_$P(@IXML@(I),"@@",J+1) ; ADD VAR AND PART AFTER
+ . . S @OXML@(I)=TSTR ; COPY LINE WITH MAPPED VALUES
+ . . I DEBUG W TSTR
+ I DEBUG W "MAPPED",!
+ Q
+ ;
+DOFLD ; PROCESS A FILEMAN FIELD REFERENCED BY A VARIABLE
+ ;
+ Q
+ ;
+TRIM(THEXML) ; TAKES OUT ALL NULL ELEMENTS
+ ; THEXML IS PASSED BY NAME
+ N I,J,TMPXML,DEL,FOUND,INTXT
+ S FOUND=0
+ S INTXT=0
+ I $G(DEBUG) W "DELETING EMPTY ELEMENTS",!
+ F I=1:1:(@THEXML@(0)-1) D ; LOOP THROUGH ENTIRE ARRAY
+ . S J=@THEXML@(I)
+ . I J["" D
+ . . S INTXT=1 ; IN HTML SECTION, DON'T TRIM
+ . . I $G(DEBUG) W "IN HTML SECTION",!
+ . N JM,JP,JPX ; JMINUS AND JPLUS
+ . S JM=@THEXML@(I-1) ; LINE BEFORE
+ . I JM["" S INTXT=0 ; LEFT HTML SECTION,START TRIM
+ . S JP=@THEXML@(I+1) ; LINE AFTER
+ . I INTXT=0 D ; IF NOT IN AN HTML SECTION
+ . . S JPX=$TR(JP,"/","") ; REMOVE THE SLASH
+ . . I J=JPX D ; AN EMPTY ELEMENT ON TWO LINES
+ . . . I $G(DEBUG) W I,J,JP,!
+ . . . S FOUND=1 ; FOUND SOMETHING TO BE DELETED
+ . . . S DEL(I)="" ; SET LINE TO DELETE
+ . . . S DEL(I+1)="" ; SET NEXT LINE TO DELETE
+ . . I J["><" D ; AN EMPTY ELEMENT ON ONE LINE
+ . . . I $G(DEBUG) W I,J,!
+ . . . S FOUND=1 ; FOUND SOMETHING TO BE DELETED
+ . . . S DEL(I)="" ; SET THE EMPTY LINE UP TO BE DELETED
+ . . . I JM=JPX D ;
+ . . . . I $G(DEBUG) W I,JM_J_JPX,!
+ . . . . S DEL(I-1)=""
+ . . . . S DEL(I+1)="" ; SET THE SURROUNDING LINES FOR DEL
+ ; . I J'["><" D PUSH("TMPXML",J)
+ I FOUND D ; NEED TO DELETE THINGS
+ . F I=1:1:@THEXML@(0) D ; COPY ARRAY LEAVING OUT DELELTED LINES
+ . . I '$D(DEL(I)) D ; IF THE LINE IS NOT DELETED
+ . . . D PUSH("TMPXML",@THEXML@(I)) ; COPY TO TMPXML ARRAY
+ . D CP("TMPXML",THEXML) ; REPLACE THE XML WITH THE COPY
+ Q FOUND
+ ;
+UNMARK(XSEC) ; REMOVE MARKUP FROM FIRST AND LAST LINE OF XML
+ ; XSEC IS A SECTION PASSED BY NAME
+ N XBLD,XTMP
+ D QUEUE("XBLD",XSEC,2,@XSEC@(0)-1) ; BUILD LIST FOR INNER XML
+ D BUILD("XBLD","XTMP") ; BUILD THE RESULT
+ D CP("XTMP",XSEC) ; REPLACE PASSED XML
+ Q
+ ;
+PARY(GLO,ZN) ;PRINT AN ARRAY
+ ; IF ZN=-1 NO LINE NUMBERS
+ N I
+ F I=1:1:@GLO@(0) D ;
+ . I $G(ZN)=-1 W @GLO@(I),!
+ . E W I_" "_@GLO@(I),!
+ Q
+ ;
+H2ARY(IARYRTN,IHASH,IPRE) ; CONVERT IHASH TO RETURN ARRAY
+ ; IPRE IS OPTIONAL PREFIX FOR THE ELEMENTS. USED FOR MUPTIPLES 1^"VAR"^VALUE
+ I '$D(IPRE) S IPRE=""
+ N H2I S H2I=""
+ ; W $O(@IHASH@(H2I)),!
+ F S H2I=$O(@IHASH@(H2I)) Q:H2I="" D ; FOR EACH ELEMENT OF THE HASH
+ . I $QS(H2I,$QL(H2I))="M" D Q ; SPECIAL CASE FOR MULTIPLES
+ . . ;W H2I_"^"_@IHASH@(H2I),!
+ . . N IH,IHI
+ . . S IH=$NA(@IHASH@(H2I)) ;
+ . . S IH2A=$O(@IH@("")) ; SKIP OVER MULTIPLE DISCRIPTOR
+ . . S IH2=$NA(@IH@(IH2A)) ; PAST THE "M","DIRETIONS" FOR EXAMPLE
+ . . S IHI="" ; INDEX INTO "M" MULTIPLES
+ . . F S IHI=$O(@IH2@(IHI)) Q:IHI="" D ; FOR EACH SUB-MULTIPLE
+ . . . ; W @IH@(IHI)
+ . . . S IH3=$NA(@IH2@(IHI))
+ . . . ; W "HEY",IH3,!
+ . . . D H2ARY(.IARYRTN,IH3,IPRE_";"_IHI) ; RECURSIVE CALL - INDENTED ELEMENTS
+ . . ; W IH,!
+ . . ; W "C0CZZ",!
+ . . ; W $NA(@IHASH@(H2I)),!
+ . . Q ;
+ . D PUSH(IARYRTN,IPRE_"^"_H2I_"^"_@IHASH@(H2I))
+ . ; W @IARYRTN@(0),!
+ Q
+ ;
+XVARS(XVRTN,XVIXML) ; RETURNS AN ARRAY XVRTN OF ALL UNIQUE VARIABLES
+ ; DEFINED IN INPUT XML XVIXML BY @@VAR@@
+ ; XVRTN AND XVIXML ARE PASSED BY NAME
+ ;
+ N XVI,XVTMP,XVT
+ F XVI=1:1:@XVIXML@(0) D ; FOR ALL LINES OF THE XML
+ . S XVT=@XVIXML@(XVI)
+ . I XVT["@@" S XVTMP($P(XVT,"@@",2))=XVI
+ D H2ARY(XVRTN,"XVTMP")
+ Q
+ ;
+DXVARS(DXIN) ;DISPLAY ALL VARIABLES IN A TEMPLATE
+ ; IF PARAMETERS ARE NULL, DEFAULTS TO CCR TEMPLATE
+ ;
+ N DXUSE,DTMP ; DXUSE IS NAME OF VARIABLE, DTMP IS VARIABLE IF NOT SUPPLIED
+ I DXIN="CCR" D ; NEED TO GO GET CCR TEMPLATE
+ . D LOAD^C0CCCR0("DTMP") ; LOAD CCR TEMPLATE INTO DXTMP
+ . S DXUSE="DTMP" ; DXUSE IS NAME
+ E I DXIN="CCD" D ; NEED TO GO GET CCD TEMPLATE
+ . D LOAD^C0CCCD1("DTMP") ; LOAD CCR TEMPLATE INTO DXTMP
+ . S DXUSE="DTMP" ; DXUSE IS NAME
+ E S DXUSE=DXIN ; IF PASSED THE TEMPLATE TO USE
+ N DVARS ; PUT VARIABLE NAME RESULTS IN ARRAY HERE
+ D XVARS("DVARS",DXUSE) ; PULL OUT VARS
+ D PARY^C0CXPATH("DVARS") ;AND DISPLAY THEM
+ Q
+ ;
+TEST ; Run all the test cases
+ D TESTALL^C0CUNIT("C0CXPAT0")
+ Q
+ ;
+ZTEST(WHICH) ; RUN ONE SET OF TESTS
+ N ZTMP
+ S DEBUG=1
+ D ZLOAD^C0CUNIT("ZTMP","C0CXPAT0")
+ D ZTEST^C0CUNIT(.ZTMP,WHICH)
+ Q
+ ;
+TLIST ; LIST THE TESTS
+ N ZTMP
+ D ZLOAD^C0CUNIT("ZTMP","C0CXPAT0")
+ D TLIST^C0CUNIT(.ZTMP)
+ Q
+ ;