Changeset 1204 for ccr/trunk/p/C0CRIMA.m
- Timestamp:
- Jun 23, 2011, 3:01:41 PM (13 years ago)
- File:
-
- 1 edited
-
ccr/trunk/p/C0CRIMA.m (modified) (1 diff)
Legend:
- Unmodified
- Added
- Removed
-
ccr/trunk/p/C0CRIMA.m
r713 r1204 1 1 C0CRIMA ; CCDCCR/GPL - RIM REPORT ROUTINES; 6/6/08 2 ;;1.0;C0C;;May 19, 2009; 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 2 ;;1.0;C0C;;May 19, 2009;Build 38 3 ;Copyright 2008,2009 George Lilly, University of Minnesota. 4 ;Licensed under the terms of the GNU General Public License. 5 ;See attached copy of the License. 6 ; 7 ;This program is free software; you can redistribute it and/or modify 8 ;it under the terms of the GNU General Public License as published by 9 ;the Free Software Foundation; either version 2 of the License, or 10 ;(at your option) any later version. 11 ; 12 ;This program is distributed in the hope that it will be useful, 13 ;but WITHOUT ANY WARRANTY; without even the implied warranty of 14 ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 15 ;GNU General Public License for more details. 16 ; 17 ;You should have received a copy of the GNU General Public License along 18 ;with this program; if not, write to the Free Software Foundation, Inc., 19 ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. 20 ; 21 ; THESE ROUTINES EXAMINE ONE OR MORE, UP TO ALL, OF THE PATIENTS ON THE 22 ; SYSTEM TO DETERMINE HOW COMPLETE THE RESULTING CCR OR CCD WOULD BE FOR 23 ; THESE PATIENTS. IT BEGINS TO MEASURE "HL7 RIM COHERENCE" WHICH IS HOW USEFUL 24 ; THE VARIABLES WILL BE TO A RIM-MODELED APPLICATION AFTER THEY ARE 25 ; CONVEYED VIA THE CCR OR CCD. 26 ; FACTORS THAT AFFECT RIM COHERENCE INCLUDE: 27 ; 1. THE PRESENSE OF CLINICAL DATA IN A SECTION 28 ; 2. ARE THE DATA ELEMENTS TIME-BOUND 29 ; 3. ARE THE DATA ELEMENTS CODED WITH SNOMED OR LOINC ETC 30 ; 4. ARE SOURCE ACTORS ASSOCIATED WITH THE DATA ELEMENTS 31 ; 5. ARE ACTORS IDENTIFIED REGARDING THEIR ROLE 32 ; .. AND OTHER FACTORS YET TO BE DETERMINED 33 ; 34 ; SINCE THESE MEASUREMENTS ARE DONE AT THE VARIABLE LEVEL, THEY 35 ; REFLECT ON RIM COHERENCE WHETHER THE CCR OR THE CCD IS USED FOR 36 ; CONVEYANCE TO THE RIM APPLICATION. 37 ; 38 ; 39 39 ANALYZE(BEGDFN,DFNCNT,APARMS) ; RIM COHERANCE ANALYSIS ROUTINE 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 40 ; BEGINS AT BEGDFN AND GOES FOR DFNCNT PATIENTS 41 ; TO RESUME AT NEXT PATIENT, USE BEGDFN="" 42 ; USE RESET^C0CRIMA TO RESET TO TOP OF PATIENT LIST 43 ; APARMS ARE PARAMETERS TO BE USED IN THE EXTRACTION 44 ; SEE C0CPARMS FOR SUPPORTED PARAMTERS 45 ; 46 N RIMARY,RIMTMP,RIMI,RIMDFN,RATTR 47 N CCRGLO 48 S C0CCHK=0 ; CHECKSUM FLAG 49 D ASETUP ; SET UP VARIABLES AND GLOBALS 50 D AINIT ; INITIALIZE ATTRIBUTE VALUE TABLE 51 I '$D(@RIMBASE@("RESUME")) S @RIMBASE@("RESUME")=$O(^DPT(0)) ; FIRST TIME 52 S RESUME=@RIMBASE@("RESUME") ; WHERE WE LEFT OFF LAST RUN 53 S RIMDFN=BEGDFN ; BEGIN WITH THE BEGDFN PATIENT 54 I RIMDFN="" S RIMDFN=RESUME 55 I +RIMDFN=0 D Q ; AT THE END OF THE PATIENTS 56 . W "END OF PATIENT LIST, CALL RESET^C0CRIMA",! 57 I '$D(APARMS) S APARMS="" ; DEFAULT NO OVERRIDE PARMS 58 F RIMI=1:1:DFNCNT D Q:+RIMDFN=0 ; FOR DFNCNT NUMBER OF PATIENTS OR END 59 . K @RIMBASE@("VARS",RIMDFN) ; CLEAR OUT OLD VARS 60 . D CCRRPC^C0CCCR(.CCRGLO,RIMDFN,APARMS,"CCR") ;PROCESS THE CCR 61 . W RIMDFN,! 62 . ; 63 . ; COPY ALL THE VARIABLES TO THE RIM MAP AREA INDEXED BY PATIENT 64 . ; 65 . I $D(^TMP("C0CCCR",$J,"PROBVALS",1)) D ; PROBLEM VARS EXISTS 66 . . M @RIMBASE@("VARS",RIMDFN,"PROBLEMS")=^TMP("C0CCCR",$J,"PROBVALS") 67 . . S @RIMBASE@("VARS",RIMDFN,"PROBLEMS",0)=$O(^TMP("C0CCCR",$J,"PROBVALS",""),-1) 68 . I $D(^TMP("C0CCCR",$J,"VITALS",1)) D ; VITALS VARS EXISTS 69 . . M @RIMBASE@("VARS",RIMDFN,"VITALS")=^TMP("C0CCCR",$J,"VITALS") 70 . I $D(^TMP("C0CCCR",$J,"MEDMAP",1)) D ; MEDS VARS EXISTS 71 . . M @RIMBASE@("VARS",RIMDFN,"MEDS")=^TMP("C0CCCR",$J,"MEDMAP") 72 . I $D(^TMP("C0CCCR",$J,"ALERTS",1,"ALERTOBJECTID")) D ; ALERTS EXIST 73 . . W "FOUND ALERT VARS",! 74 . . M @RIMBASE@("VARS",RIMDFN,"ALERTS")=^TMP("C0CCCR",$J,"ALERTS") 75 . I $D(^TMP("C0CCCR",$J,"RESULTS",0)) D ; RESULTS EXIST 76 . . W "FOUND RESULTS VARS",! 77 . . M @RIMBASE@("VARS",RIMDFN,"RESULTS")=^TMP("C0CCCR",$J,"RESULTS") 78 . S C0CCHK=0 79 . I $$CHKSUM(RIMDFN) D ; CHECKSUM HAS CHANGED 80 . . W "CHECKSUM IS NEW OR HAS CHANGED",! 81 . . ;ZWR ^TMP("C0CRIM","CHKSUM",RIMDFN,*) 82 . . S C0CCHK=1 83 . K ^TMP("C0CCCR",$J) ; KILL WORK AREA FOR CCR BUILDING 84 . ; 85 . ; EVALUATE THE VARIABLES AND CREATE AN ATTRIBUTE MAP 86 . ; 87 . S RATTR=$$SETATTR(RIMDFN) ; SET THE ATTRIBUTE STRING BASED ON THE VARS 88 . S @RIMBASE@("ATTR",RIMDFN)=RATTR ; SAVE THE ATRIBUTES FOR THIS PAT 89 . ; 90 . ; INCREMENT THE COUNT OF PATIENTS WITH THESE ATTRIBUTES IN ATTRTBL 91 . ; 92 . ; I '$D(@RIMBASE@("ATTRTBL",RATTR)) D ; IF FIRST PAT WITH THESE ATTRS 93 . ; . S @RIMBASE@("ATTRTBL",RATTR)=0 ; DEFAULT VALUE TO BE INCREMENTED 94 . ; S @RIMBASE@("ATTRTBL",RATTR)=@RIMBASE@("ATTRTBL",RATTR)+1 ; INCREMENT 95 . ; 96 . N CATNAME,CATTBL 97 . ; S CATBASE=$NA(@RIMBASE@("ANALYSIS")) 98 . S CATNAME="" 99 . D CPUSH(.CATNAME,RIMBASE,"RIMTBL",RIMDFN,RATTR) ; ADD TO CATEGORY 100 . W "CATEGORY NAME: ",CATNAME,! 101 . ; 102 . F S RIMDFN=$O(^DPT(RIMDFN)) Q:'$$PTST^C0CSYS(RIMDFN) ; NEXT PATIENT 103 . ; PTST TESTS TO SEE IF PATIENT WAS MERGED 104 . ; IF CCRTEST=0, PTST WILL CHECK TO SEE IF THIS IS A TEST PATIENT 105 . ; AND WE SKIP IT 106 . S @RIMBASE@("RESUME")=RIMDFN ; WHERE WE ARE LEAVING OFF THIS RUN 107 ; D PARY^C0CXPATH(@RIMBASE@("ATTRTBL")) 108 Q 109 ; 110 110 SETATTR(SDFN) ; SET ATTRIBUTES BASED ON VARS 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 111 N SBASE,SATTR 112 S SBASE=$NA(@RIMBASE@("VARS",SDFN)) 113 D APOST("SATTR","RIMTBL","HEADER") 114 I $D(@SBASE@("PROBLEMS",1)) D ; 115 . D APOST("SATTR","RIMTBL","PROBLEMS") 116 . ; W "POSTING PROBLEMS",! 117 I $D(@SBASE@("VITALS",1)) D APOST("SATTR","RIMTBL","VITALS") 118 I $D(@SBASE@("IMMUNE",1)) D ;IMMUNIZATIONS PRESENT 119 . D APOST("SATTR","RIMTBL","IMMUNE") 120 . N ZR,ZI 121 . D GETPA(.ZR,SDFN,"IMMUNE","IMMUNEPRODUCTCODE") 122 . I ZR(0)>0 D APOST("SATTR","RIMTBL","IMMUNECODE") ;IMMUNIZATION CODES 123 I $D(@SBASE@("MEDS",1)) D ; IF THE PATIENT HAS MEDS VARIABLES 124 . D APOST("SATTR","RIMTBL","MEDS") 125 . N ZR,ZI 126 . D GETPA(.ZR,SDFN,"MEDS","MEDPRODUCTNAMECODEVALUE") ;CHECK FOR MED CODES 127 . I ZR(0)>0 D ; VAR LOOKUP WAS GOOD, CHECK FOR NON=NULL RETURN 128 . . F ZI=1:1:ZR(0) D ; LOOP THROUGH RETURNED VAR^VALUE PAIRS 129 . . . I $P(ZR(ZI),"^",2)'="" D APOST("SATTR","RIMTBL","MEDSCODE") ;CODES 130 . ; D PATD^C0CRIMA(2,"MEDS","MEDPRODUCTNAMECODEVALUE") CHECK FOR MED CODES 131 I $D(@SBASE@("ALERTS",1)) D ; IF THE PATIENT HAS ALERTS 132 . D APOST("SATTR","RIMTBL","ALERTS") 133 . N ZR,ZI 134 . D GETPA(.ZR,SDFN,"ALERTS","ALERTAGENTPRODUCTCODEVALUE") ;REACTANT CODES 135 . I ZR(0)>0 D ; VAR LOOKUP WAS GOOD, CHECK FOR NON=NULL RETURN 136 . . F ZI=1:1:ZR(0) D ; LOOP THROUGH RETURNED VAR^VALUE PAIRS 137 . . . I $P(ZR(ZI),"^",2)'="" D APOST("SATTR","RIMTBL","ALERTSCODE") ;CODES 138 I $D(@SBASE@("RESULTS",1)) D ; IF THE PATIENT HAS LABS VARIABLES 139 . D APOST("SATTR","RIMTBL","RESULTS") 140 . N ZR,ZI 141 . S ZR(0)=0 ; INITIALIZE TO NONE 142 . D RPCGV(.ZR,SDFN,"RESULTS") ;CHECK FOR LABS CODES 143 . ; D PARY^C0CXPATH("ZR") ; 144 . I ZR(0)>0 D ; VAR LOOKUP WAS GOOD, CHECK FOR NON=NULL RETURN 145 . . F ZI=1:1:ZR(0) D ; LOOP THROUGH RETURNED VAR^VALUE PAIRS 146 . . . I $P(ZR(ZI),"^",2)="RESULTTESTCODINGSYSTEM" D ; LOINC CODE CHECK 147 . . . . I $P(ZR(ZI),"^",3)="LOINC" D APOST("SATTR","RIMTBL","RESULTSLN") ; 148 ; D APOST("SATTR","RIMTBL","NOTEXTRACTED") ; OUTPUT NOT YET PRODUCED 149 I $D(@SBASE@("PROCEDURES",1)) D ; 150 . D APOST("SATTR","RIMTBL","PROCEDURES") 151 W "ATTRIBUTES: ",SATTR,! 152 Q SATTR 153 ; 154 154 RESET ; KILL RESUME INDICATOR TO START OVER. ALSO KILL RIM TMP VALUES 155 156 157 158 155 K ^TMP("C0CRIM","RESUME") 156 K ^TMP("C0CRIM") 157 Q 158 ; 159 159 CLIST ; LIST THE CATEGORIES 160 161 162 163 164 165 166 167 168 169 170 171 172 160 ; 161 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS 162 N CLBASE,CLNUM,ZI,CLIDX 163 S CLBASE=$NA(@RIMBASE@("RIMTBL","CATS")) 164 S CLNUM=@CLBASE@(0) 165 F ZI=1:1:CLNUM D ; LOOP THROUGH THE CATEGORIES 166 . S CLIDX=@CLBASE@(ZI) 167 . W "(",$P(@CLBASE@(CLIDX),"^",1) 168 . W ":",$P(@CLBASE@(CLIDX),"^",2),") " 169 . W CLIDX,! 170 ; D PARY^C0CXPATH(CLBASE) 171 Q 172 ; 173 173 CPUSH(CATRTN,CBASE,CTBL,CDFN,CATTR) ; ADD PATIENTS TO CATEGORIES 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 174 ; AND PASS BACK THE NAME OF THE CATEGORY TO WHICH THE PATIENT 175 ; WAS ADDED IN CATRTN, WHICH IS PASSED BY REFERENCE 176 ; CBASE IS WHERE TO PUT THE CATEGORIES PASSED BY NAME 177 ; CTBL IS THE NAME OF THE TABLE USED TO CREATE THE ATTRIBUTES, 178 ; PASSED BY NAME AND USED TO CREATE CATEGORY NAMES IE "@CTBL_X" 179 ; WHERE X IS THE CATEGORY NUMBER. CTBL(0) IS THE NUMBER OF CATEGORIES 180 ; CATBL(X)=CATTR STORES THE ATTRIBUTE IN THE CATEGORY 181 ; CDFN IS THE PATIENT DFN, CATTR IS THE ATTRIBUTE STRING 182 ; THE LIST OF PATIENTS IN A CATEGORY IS STORED INDEXED BY CATEGORY 183 ; NUMBER IE CTBL_X(CDFN)="" 184 ; 185 ; N CCTBL,CENTRY,CNUM,CCOUNT,CPATLIST 186 S CCTBL=$NA(@CBASE@(CTBL,"CATS")) 187 W "CBASE: ",CCTBL,! 188 ; 189 I '$D(@CCTBL@(CATTR)) D ; FIRST PATIENT IN THIS CATEGORY 190 . D PUSH^C0CXPATH(CCTBL,CATTR) ; ADD THE CATEGORY TO THE ARRAY 191 . S CNUM=@CCTBL@(0) ; ARRAY ENTRY NUMBER FOR THIS CATEGORY 192 . S CENTRY=CTBL_"_"_CNUM_U_0 ; TABLE ENTRY DEFAULT 193 . S @CCTBL@(CATTR)=CENTRY ; DEFAULT NON INCREMENTED TABLE ENTRY 194 . ; NOTE THAT P1 IS THE CATEGORY NAME MADE UP OF THE TABLE NAME 195 . ; AND CATGORY ARRAY NUMBER. P2 IS THE COUNT WHICH IS INITIALLY 0 196 ; 197 S CCOUNT=$P(@CCTBL@(CATTR),U,2) ; COUNT OF PATIENTS IN THIS CATEGORY 198 S CCOUNT=CCOUNT+1 ; INCREMENT THE COUNT 199 S $P(@CCTBL@(CATTR),U,2)=CCOUNT ; PUT IT BACK 200 ; 201 S CATRTN=$P(@CCTBL@(CATTR),U,1) ; THE CATEGORY NAME WHICH IS RETURNED 202 ; 203 S CPATLIST=$NA(@CBASE@(CTBL,"PATS",CATRTN)) ; BASE OF PAT LIST FOR THIS CAT 204 W "PATS BASE: ",CPATLIST,! 205 S @CPATLIST@(CDFN)="" ; ADD THIS PATIENT TO THE CAT PAT LIST 206 ; 207 Q 208 ; 209 209 CHKSUM(CKDFN) ; DOES A CHECKSUM AND STORES IT IN MUMPS GLOBALS 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 210 ; 211 S C0CCKB=$NA(^TMP("C0CRIM","CHKSUM")) ;CHECKSUM BASE 212 S C0CGLB=$NA(^TMP("C0CRIM","VARS")) ;CCR VARIABLE BASE 213 S C0CI="" 214 F S C0CI=$O(@C0CGLB@(CKDFN,C0CI)) Q:C0CI="" D ;FOR EACH DOMAIN 215 . ;W "DFN:",CKDFN," DOMAIN:",C0CI,! 216 . S C0CJ=$NA(@C0CGLB@(CKDFN,C0CI)) 217 . I C0CI="HEADER" D ; HAVE TO TAKE OUT THE "DATE GENERATED" 218 . . S C0CDT=@C0CGLB@(CKDFN,C0CI,1,"DATETIME") 219 . . K @C0CGLB@(CKDFN,C0CI,1,"DATETIME") 220 . S C0CCK(C0CI)=$$CHKSUM^XUSESIG1(C0CJ) 221 . I C0CI="HEADER" D ; PUT IT BACK 222 . . S @C0CGLB@(CKDFN,C0CI,1,"DATETIME")=C0CDT 223 S C0CK="C0CCK" ; 224 S C0CALL=$$CHKSUM^XUSESIG1(C0CK) ;CHECKSUM OF ALL DOMAIN CHECKSUMS 225 S CHKR=0 ; RESULT DEFAULT 226 I $D(^TMP("C0CRIM","CHKSUM",CKDFN,"ALL")) D ; OLD CHECKSUM EXISTS 227 . I @C0CCKB@(CKDFN,"ALL")'=C0CALL S CHKR=1 228 E S CHKR=1 ;CHECKSUM IS NEW 229 S @C0CCKB@(CKDFN,"ALL")=C0CALL 230 M @C0CCKB@(CKDFN,"DOMAIN")=C0CCK 231 ;ZWR ^TMP("C0CRIM","CHKSUM",CKDFN,*) 232 Q CHKR 233 ; 234 234 CCOUNT ; RECOUNT THE CATEGORIES.. USE IN CASE OF RESTART OF ANALYZE 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 235 ; 236 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS 237 N ZI,ZJ,ZCNT,ZIDX,ZCAT,ZATR,ZTOT 238 S ZCBASE=$NA(@RIMBASE@("RIMTBL","CATS")) ; BASE OF CATEGORIES 239 S ZPBASE=$NA(@RIMBASE@("RIMTBL","PATS")) ; BASE OF PATIENTS 240 S ZTOT=0 ; INITIALIZE OVERALL TOTAL 241 F ZI=1:1:@ZCBASE@(0) D ; FOR ALL CATS 242 . S ZCNT=0 243 . S ZATR=@ZCBASE@(ZI) ; THE ATTRIBUTE OF THE CATEGORY 244 . S ZCAT=$P(@ZCBASE@(ZATR),"^",1) ; USE IT TO LOOK UP THE CATEGORY NAME 245 . ; S ZIDX=$O(@ZPBASE@(ZCAT,"")) ; FIRST PATIENT IN LIST 246 . ; F ZJ=0:0 D Q:$O(@ZPBASE@(ZCAT,ZIDX))="" ; ALL PATIENTS IN THE LISTS 247 . ; . S ZCNT=ZCNT+1 ; INCREMENT THE COUNT 248 . ; . W ZCAT," DFN:",ZIDX," COUNT:",ZCNT,! 249 . ; . S ZIDX=$O(@ZPBASE@(ZCAT,ZIDX)) 250 . S ZCNT=$$CNTLST($NA(@ZPBASE@(ZCAT))) 251 . S $P(@ZCBASE@(ZATR),"^",2)=ZCNT ; UPDATE THE COUNT IN THE CAT RECORD 252 . S ZTOT=ZTOT+ZCNT 253 W "TOTAL: ",ZTOT,! 254 Q 255 ; 256 256 CNTLST(INLST) ; RETURNS THE NUMBER OF ELEMENTS IN THE LIST 257 258 259 260 261 262 263 264 265 266 267 257 ; INLST IS PASSED BY NAME 258 N ZI,ZDX,ZCOUNT 259 W INLST,! 260 S ZCOUNT=0 261 S ZDX="" 262 F ZI=$O(@INLST@(ZDX)):0 D Q:$O(@INLST@(ZDX))="" ; LOOP UNTIL THE END 263 . S ZCOUNT=ZCOUNT+1 264 . S ZDX=$O(@INLST@(ZDX)) 265 . W "ZDX:",ZDX," ZCNT:",ZCOUNT,! 266 Q ZCOUNT 267 ; 268 268 XCPAT(CPATCAT,CPATPARM) ; EXPORT TO FILE ALL PATIENTS IN CATEGORY CPATCAT 269 270 271 272 273 274 275 276 277 278 279 269 ; 270 I '$D(CPATPARM) S CPATPARM="" 271 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS 272 N ZI,ZJ,ZC,ZPATBASE 273 S ZPATBASE=$NA(@RIMBASE@("RIMTBL","PATS",CPATCAT)) 274 S ZI="" 275 F ZJ=0:0 D Q:$O(@ZPATBASE@(ZI))="" ; TIL END 276 . S ZI=$O(@ZPATBASE@(ZI)) 277 . D XPAT^C0CCCR(ZI,CPATPARM) ; EXPORT THE PATIENT TO A FILE 278 Q 279 ; 280 280 CPAT(CPATCAT) ; SHOW PATIENT DFNS FOR A CATEGORY CPATCAT 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 281 ; 282 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS 283 N ZI,ZJ,ZC,ZPATBASE 284 S ZC=0 ; COUNT FOR SPACING THE PRINTOUT 285 S ZPATBASE=$NA(@RIMBASE@("RIMTBL","PATS",CPATCAT)) 286 S ZI="" 287 F ZJ=0:0 D Q:$O(@ZPATBASE@(ZI))="" ; TIL END 288 . S ZI=$O(@ZPATBASE@(ZI)) 289 . S ZC=ZC+1 ; INCREMENT OUTPUT PER LINE COUNT 290 . W ZI," " 291 . I ZC=10 D ; NEW LINE 292 . . S ZC=0 293 . . W ! 294 Q 295 ; 296 296 PATC(DFN) ; DISPLAY THE CATEGORY FOR THIS PATIENT 297 298 299 300 301 302 303 304 305 306 307 308 297 ; 298 N ATTR S ATTR="" 299 I '$D(^TMP("C0CRIM","ATTR",DFN)) D ; RIM VARS NOT PRESENT 300 . D ANALYZE(DFN,1) ; EXTRACT THE RIM VARIABLE FOR THIS PATIENT 301 S ATTR=^TMP("C0CRIM","ATTR",DFN) 302 I ATTR="" W "THIS PATIENT NOT ANALYZED.",! Q ;NO ATTRIBUTES FOUND 303 I $D(^TMP("C0CRIM","RIMTBL","CATS",ATTR)) D ; FOUND A CAT 304 . N CAT 305 . S CAT=$P(^TMP("C0CRIM","RIMTBL","CATS",ATTR),U,1) ; LOOK UP THE CAT 306 . W CAT,": ",ATTR,! 307 Q 308 ; 309 309 APUSH(AMAP,AVAL) ; ADD AVAL TO ATTRIBUTE MAP AMAP (AMAP PASSED BY NAME) 310 311 312 313 314 315 316 317 318 319 320 321 322 323 310 ; AMAP IS FORMED FOR ARRAY ACCESS: AMAP(0) IS THE COUNT 311 ; AND AMAP(N)=AVAL IS THE NTH AVAL 312 ; ALSO HASH ACCESS AMAP(AVAL)=N WHERE N IS THE ASSIGNED ORDER OF THE 313 ; MAP VALUE. INSTANCES OF THE MAP WILL USE $P(X,U,N)=AVAL TO PLACE 314 ; THE ATTRIBUTE IN ITS RIGHT PLACE. THE ATTRIBUTE VALUE IS STORED 315 ; SO THAT DIFFERENT MAPS CAN BE AUTOMATICALLY CROSSWALKED 316 ; 317 I '$D(@AMAP) D ; IF THE MAP DOES NOT EXIST 318 . S @AMAP@(0)=0 ; HAS ZERO ELEMENTS 319 S @AMAP@(0)=@AMAP@(0)+1 ;INCREMENT ELEMENT COUNT 320 S @AMAP@(@AMAP@(0))=AVAL ; ADD THE VALUE TO THE ARRAY 321 S @AMAP@(AVAL)=@AMAP@(0) ; ADD THE VALUE TO THE HASH WITH ARRAY REF 322 Q 323 ; 324 324 ASETUP ; SET UP GLOBALS AND VARS RIMBASE AND RIMTBL 325 326 327 328 329 330 325 I '$D(RIMBASE) S RIMBASE=$NA(^TMP("C0CRIM")) 326 I '$D(@RIMBASE) S @RIMBASE="" 327 I '$D(RIMTBL) S RIMTBL=$NA(^TMP("C0CRIM","RIMTBL","TABLE")) ; ATTR TABLE 328 S ^TMP("C0CRIM","TABLES","RIMTBL")=RIMTBL ; TABLE OF TABLES 329 Q 330 ; 331 331 AINIT ; INITIALIZE ATTRIBUTE TABLE 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 332 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS 333 K @RIMTBL 334 D APUSH(RIMTBL,"EXTRACTED") 335 D APUSH(RIMTBL,"NOTEXTRACTED") 336 D APUSH(RIMTBL,"HEADER") 337 D APUSH(RIMTBL,"NOPCP") 338 D APUSH(RIMTBL,"PCP") 339 D APUSH(RIMTBL,"PROBLEMS") 340 D APUSH(RIMTBL,"PROBCODE") 341 D APUSH(RIMTBL,"PROBNOCODE") 342 D APUSH(RIMTBL,"PROBDATE") 343 D APUSH(RIMTBL,"PROBNODATE") 344 D APUSH(RIMTBL,"VITALS") 345 D APUSH(RIMTBL,"VITALSCODE") 346 D APUSH(RIMTBL,"VITALSNOCODE") 347 D APUSH(RIMTBL,"VITALSDATE") 348 D APUSH(RIMTBL,"VITALSNODATE") 349 D APUSH(RIMTBL,"IMMUNE") 350 D APUSH(RIMTBL,"IMMUNECODE") 351 D APUSH(RIMTBL,"MEDS") 352 D APUSH(RIMTBL,"MEDSCODE") 353 D APUSH(RIMTBL,"MEDSNOCODE") 354 D APUSH(RIMTBL,"MEDSDATE") 355 D APUSH(RIMTBL,"MEDSNODATE") 356 D APUSH(RIMTBL,"ALERTS") 357 D APUSH(RIMTBL,"ALERTSCODE") 358 D APUSH(RIMTBL,"RESULTS") 359 D APUSH(RIMTBL,"RESULTSLN") 360 D APUSH(RIMTBL,"PROCEDURES") 361 D APUSH(RIMTBL,"ENCOUNTERS") 362 D APUSH(RIMTBL,"NOTES") 363 Q 364 ; 365 365 APOST(PRSLT,PTBL,PVAL) ; POST AN ATTRIBUTE PVAL TO PRSLT USING PTBL 366 367 368 369 370 371 372 373 374 375 366 ; PSRLT AND PTBL ARE PASSED BY NAME. PVAL IS A STRING 367 ; PTBL IS THE NAME OF A TABLE IN @RIMBASE@("TABLES") - "RIMTBL"=ALL VALUES 368 ; PVAL WILL BE PLACED IN THE STRING PRSLT AT $P(X,U,@PTBL@(PVAL)) 369 I '$D(RIMBASE) D ASETUP ; FOR COMMANDLINE PROCESSING 370 N USETBL 371 I '$D(@RIMBASE@("TABLES",PTBL)) D Q ; NO TABLE 372 . W "ERROR NO SUCH TABLE",! 373 S USETBL=@RIMBASE@("TABLES",PTBL) 374 S $P(@PRSLT,U,@USETBL@(PVAL))=PVAL 375 Q 376 376 GETPA(RTN,DFN,ISEC,IVAR) ; RETURNS ARRAY OF RIM VARIABLES FOR PATIENT DFN 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 377 ; EXAMPLE: D GETPA(.RT,2,"MEDS","MEDSSTATUSTEXT") 378 ; RETURNS AN ARRAY RT OF VALUES OF MEDSTATUSTEXT FOR PATIENT 2 IN P2 379 ; IN SECTION "MEDS" 380 ; P1 IS THE IEN OF THE MED WITH THE VALUE IE 2^PENDING WOULD BE STATUS 381 ; PENDING FOR MED 2 FOR PATIENT 2 382 ; RT(0) IS THE COUNT OF HOW MANY IN THE ARRAY. NULL VALUES ARE 383 ; RETURNED. RTN IS PASSED BY REFERENCE 384 ; 385 S RTN(0)=0 ; SET NULL DEFAULT RETURN VALUE 386 I '$D(RIMBASE) D AINIT ; INITIALIZE GLOBAL NAMES AND TABLES 387 S ZVBASE=$NA(@RIMBASE@("VARS")) ; BASE OF VARIABLES 388 I '$D(@ZVBASE@(DFN,ISEC,0)) D Q ; NO VARIABLES IN SECTION 389 . W "NO VARIABLES IN THIS SECTION FOR PATIENT ",DFN,! 390 N ZZI,ZZS 391 S ZZS=$NA(@ZVBASE@(DFN,ISEC)) ; SECTION VARIABLE ARRAY FOR THIS PATIENT 392 ; ZWR @ZZS@(1) 393 S RTN(0)=@ZZS@(0) 394 F ZZI=1:1:RTN(0) D ; FOR ALL PARTS OF THIS SECTION ( IE FOR ALL MEDS) 395 . S $P(RTN(ZZI),"^",1)=ZZI ; INDEX FOR VARIABLE 396 . S $P(RTN(ZZI),"^",2)=@ZZS@(ZZI,IVAR) ; THE VALUE OF THE VARIABLE 397 Q 398 ; 399 399 PATD(DFN,ISEC,IVAR) ; DISPLAY FOR PATIENT DFN THE VARIABLE IVAR 400 401 402 403 404 405 406 400 ; 401 N ZR 402 D GETPA(.ZR,DFN,ISEC,IVAR) 403 I $D(ZR(0)) D PARY^C0CXPATH("ZR") 404 E W "NOTHING RETURNED",! 405 Q 406 ; 407 407 CAGET(RTN,IATTR) ; 408 409 410 411 412 408 ; GETPA LOOKS AT RIMTBL TO FIND PATIENTS WITH ATTRIBUTE IATTR 409 ; IT DOES NOT SEARCH ALL PATIENTS, ONLY THE ONES WITH THE ATTRIBUTE 410 ; IT RETURNS AN ARRAY OF THE VALUES OF VARIABLE IVAR IN SECTION ISEC 411 Q 412 ; 413 413 PCLST(LSTRTN,IATTR) ; RETURNS ARRAY OF PATIENTS WITH ATTRIBUTE IATTR 414 415 416 417 S LSTRTN(0)=0 ; DEFAULT RETURN NONE418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 S ZPAT=""; START AT FIRST PATIENT IN LIST433 434 435 436 437 414 ; 415 I '$D(RIMBASE) D AINIT ; INITIALIZE GLOBAL NAMES AND TABLES 416 N ZLST 417 S @LSTRTN@(0)=0 ; DEFAULT RETURN NONE 418 S ZCBASE=$NA(@RIMBASE@("RIMTBL","CATS")) ; BASE OF CATEGORIES 419 S ZPBASE=$NA(@RIMBASE@("RIMTBL","PATS")) ; BASE OF PATIENTS 420 N ZNC ; ZNC IS NUMBER OF CATEGORIES 421 S ZNC=@ZCBASE@(0) 422 I ZNC=0 Q ; NO CATEGORIES TO SEARCH 423 N ZAP ; ZAP IS THE PIECE INDEX OF THE ATTRIBUTE IN THE RIM ATTR TABLE 424 S ZAP=@RIMBASE@("RIMTBL","TABLE",IATTR) 425 N ZI,ZCATTBL,ZATBL,ZCNT,ZPAT 426 F ZI=1:1:ZNC D ; FOR ALL CATEGORIES 427 . S ZATBL=@ZCBASE@(ZI) ; PULL OUT ATTR TBL FOR CAT 428 . I $P(ZATBL,"^",ZAP)'="" D ; CAT HAS ATTR 429 . . S ZCATTBL=$P(@ZCBASE@(ZATBL),"^",1) ; NAME OF TBL 430 . . M @LSTRTN=@ZPBASE@(ZCATTBL) ; MERGE PATS FROM CAT 431 S ZCNT=0 ; INITIALIZE COUNT OF PATIENTS 432 S ZPAT=0 ; START AT FIRST PATIENT IN LIST 433 F S ZPAT=$O(@LSTRTN@(ZPAT)) Q:ZPAT="" D ; 434 . S ZCNT=ZCNT+1 435 S @LSTRTN@(0)=ZCNT ; COUNT OF PATIENTS IN ARRAY 436 Q 437 ; 438 438 DCPAT(CATTR) ; DISPLAY LIST OF PATIENTS WITH ATTRIBUTE CATTR 439 ; 440 N ZR 441 D PCLST(.ZR,CATTR) 442 I ZR(0)=0 D Q ; 443 . W "NO PATIENTS RETURNED",! 444 E D ; 445 . D PARY^C0CXPATH("ZR") ; PRINT ARRAY 446 . W "COUNT=",ZR(0),! 447 Q 448 ; 439 ; 440 ;N ZR 441 D PCLST("ZR",CATTR) 442 I ZR(0)=0 D Q ; 443 . W "NO PATIENTS RETURNED",! 444 E D ; 445 . N ZI S ZI=0 446 . F S ZI=$O(ZR(ZI)) Q:ZI="" D ; 447 . . W !,ZI 448 . ;D PARY^C0CXPATH("ZR") ; PRINT ARRAY 449 . W !,"COUNT=",ZR(0) 450 Q 451 ; 449 452 RPCGV(RTN,DFN,WHICH) ; RPC GET VARS 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 453 ; RETURNS IN RTN (PASSED BY REFERENCE) THE VARS AND VALUES 454 ; FOUND AT INARY RTN(X)="VAR^VALUE" RTN(0) IS THE COUNT 455 ; DFN IS THE PATIENT NUMBER. 456 ; WHICH IS "ALL","MEDS","VITALS","PROBLEMS","ALERTS","RESULTS","IMMUNE" 457 ; OR OTHER SECTIONS AS THEY ARE ADDED 458 ; THIS IS MEANT TO BE AVAILABLE AS AN RPC 459 I '$D(RIMBASE) D ASETUP ; FOR COMMAND LINE CALLS 460 S ZVBASE=$NA(@RIMBASE@("VARS")) ; BASE OF VARIABLES 461 S RTN(0)=0 ; DEFAULT NOTHING IS RETURNED 462 N ZZGI 463 I WHICH="ALL" D ; VARIABLES FROM ALL SECTIONS 464 . F ZZGI="HEADER","PROBLEMS","VITALS","MEDS","ALERTS","RESULTS","IMMUNE","PROCEDURES" D ; 465 . . D ZGVWRK(ZZGI) ; DO EACH SECTION 466 . . I $G(DEBUG)'="" W "DID ",ZZGI,! 467 E D ZGVWRK(WHICH) ; ONLY ONE SECTION ASKED FOR 468 Q 469 ; 467 470 ZGVWRK(ZWHICH) ; DO ONE SECTION FOR RPCGV 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 471 ; 472 N ZZGN ; NAME FOR SECTION VARIABLES 473 S ZZGN=$NA(@ZVBASE@(DFN,ZWHICH)) ; BASE OF VARS FOR SECTION 474 ;I '$D(@ZZGN@(0)) Q ; NO VARS FOR THIS SECTION 475 I $O(@ZZGN@(""),-1)="" D ; 476 E D ; VARS EXIST 477 . N ZGVI,ZGVN 478 . S ZGVN=$O(@ZZGN@(""),-1) ;COUNT OF VARS 479 . F ZGVI=1:1:ZGVN D ; FOR EACH MULTIPLE IN SECTION 480 . . K ZZGA N ZZGA ; TEMP ARRAY FOR SECTION VARS 481 . . K ZZGN2 N ZZGN2 ; NAME FOR MULTIPLE 482 . . S ZZGN2=$NA(@ZZGN@(ZGVI)) 483 . . I $G(DEBUG)'="" W ZZGN2,!,$O(@ZZGN2@("")),! 484 . . D H2ARY^C0CXPATH("ZZGA",ZZGN2,ZGVI) ; CONVERT HASH TO ARRAY 485 . . ; D PARY^C0CXPATH("ZZGA") 486 . . D PUSHA^C0CXPATH("RTN","ZZGA") ; PUSH ARRAY INTO RETURN 487 Q 488 ; 486 489 DPATV(DFN,IWHICH) ; DISPLAY VARS FOR PATIENT DFN THAT ARE MAINTAINED IN C0CRIM 487 488 489 490 491 492 493 494 495 496 490 ; ALONG WITH SAMPLE VALUES. 491 ; IWHICH IS "ALL","MEDS","VITALS","PROBLEMS","ALERTS","RESULTS","HEADER" 492 N GTMP 493 I '$D(^TMP("C0CRIM","ATTR",DFN)) D ; RIM VARS NOT PRESENT 494 . D ANALYZE(DFN,1) ; REFRESH THE RIM VARIABLES 495 I '$D(IWHICH) S IWHICH="ALL" 496 D RPCGV(.GTMP,DFN,IWHICH) 497 D PARY^C0CXPATH("GTMP") 498 Q 499 ; 497 500 RIM2RNF(R2RTN,DFN,RWHICH) ; CONVERTS RIM VARIABLES TO RNF2 FORMAT 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 501 ; RETURN IN R2RTN, WHICH IS PASSED BY NAME 502 ; RWHICH IS RIM SECTION TO RETURN, DEFAULTS TO "ALL" 503 ; 504 I '$D(RWHICH) S RWHICH="ALL" 505 ;N R2TMP 506 I '$D(^TMP("C0CRIM","ATTR",DFN)) D ; RIM VARS NOT PRESENT 507 . D ANALYZE(DFN,1) ; REFRESH THE RIM VARIABLES 508 D RPCGV(.R2TMP,DFN,RWHICH) ; RETRIEVE ALL THE VARIABLES I AN ARRAY 509 N R2I,R2J,R2X,R2X1,R2X2,R2Y,R2Z 510 F R2I=1:1:R2TMP(0) D ; FOR EVERY LINE OF THE ARRAY 511 . S R2X=$P(R2TMP(R2I),"^",1) ; OCCURANCE 512 . S R2Y=$P(R2TMP(R2I),"^",2) ; VARIABLE NAME 513 . I $L(R2Y)<4 Q ; SKIP SHORT VARIABLES (THEY ARE FOR DEBUGGING) 514 . S R2Z=$P(R2TMP(R2I),"^",3) ; VALUE 515 . I R2X[";" D ; THERES MULTIPLES 516 . . S R2X1=$P(R2X,";",1) ; FIRST INDEX 517 . . S R2X2=$P(R2X,";",2) ; SECOND INDEX 518 . . S R2J=R2Y_"["_R2X2_"]" ; BUILD THE VARIABLE NAME 519 . . S @R2RTN@("F",R2J,1)="" ; PUT VARIABLE NAME IN FIELD MAP 520 . . S @R2RTN@("V",R2X1,R2J,1)=R2Z ; PUT THE VALUE IN THE ARRAY 521 . E D ; NO SUB-MULTIPLES 522 . . S @R2RTN@("F",R2Y,1)="" ; PUT VARIABLE NAME IN FIELD MAP 523 . . S @R2RTN@("V",R2X,R2Y,1)=R2Z ; PUT THE VALUE IN THE ARRAY 524 Q 525 ; 523 526 RIM2CSV(DFN) ; WRITE THE RIM VARIABLES FOR A PATIENT TO A CSV FILE 524 525 526 527 528 529 530 527 ; 528 N R2CTMP,R2CARY 529 D RIM2RNF("R2CTMP",DFN) ; CONVERT VARIABLES TO RNF FORMAT 530 D RNF2CSV^C0CRNF("R2CARY","R2CTMP","NV") ; CONVERT RNF TO CSV FORMAT 531 D FILEOUT^C0CRNF("R2CARY","VARS-"_DFN_".csv") 532 Q 533 ;
Note:
See TracChangeset
for help on using the changeset viewer.
