Ignore:
Timestamp:
Oct 13, 2012, 2:49:26 PM (12 years ago)
Author:
George Lilly
Message:

fix for lab units not found and C0STBL analysis routines

File:
1 edited

Legend:

Unmodified
Added
Removed
  • smart/trunk/p/C0SDOM.m

    r1569 r1571  
    1 C0SDOM   ; GPL - Smart Container - DOM PROCESSING ROUTINES ;6/6/11  17:05
    2  ;;0.1;C0S;nopatch;noreleasedate;Build 2
    3  ;Copyright 2011,2012 George Lilly.  Licensed under the terms of the GNU
    4  ;General Public License See attached copy of the License.
    5  ;
    6  ;This program is free software; you can redistribute it and/or modify
    7  ;it under the terms of the GNU General Public License as published by
    8  ;the Free Software Foundation; either version 2 of the License, or
    9  ;(at your option) any later version.
    10  ;
    11 
    12  ;This program is distributed in the hope that it will be useful,
    13  ;but WITHOUT ANY WARRANTY; without even the implied warranty of
    14  ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    15  ;GNU General Public License for more details.
    16  ;
    17  ;You should have received a copy of the GNU General Public License along
    18  ;with this program; if not, write to the Free Software Foundation, Inc.,
    19  ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
    20  ;
    21  Q
    22  ;
    23 DOMO(ZOID,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; RECURSIVE ROUTINE TO POPULATE
    24  ; THE XPATH INDEX ZXIDX, PASSED BY NAME
    25  ; THE XPATH ARRAY XPARY, PASSED BY NAME
    26  ; ZOID IS THE STARTING OID
    27  ; ZPATH IS THE STARTING XPATH, USUALLY "/"
    28  ; ZNUM IS THE MULTIPLE NUMBER [x], USUALLY NULL WHEN ON THE TOP NODE
    29  ; ZREDUX IS THE XPATH REDUCTION STRING, TAKEN OUT OF EACH XPATH IF PRESENT
    30  I $G(ZREDUX)="" S ZREDUX=""
    31  N NEWPATH,NARY ; NEWPATH IS AN XPATH NARY IS AN NHIN MUMPS ARRAY
    32  N NEWNUM S NEWNUM=""
    33  I $G(ZNUM)>0 S NEWNUM="["_ZNUM_"]"
    34  S NEWPATH=ZPATH_"/"_$$TAG(ZOID)_NEWNUM ; CREATE THE XPATH FOR THIS NODE
    35  I $G(ZREDUX)'="" D  ; REDUX PROVIDED?
    36  . N GT S GT=$P(NEWPATH,ZREDUX,2)
    37  . I GT'="" S NEWPATH=GT
    38  S @ZXIDX@(NEWPATH)=ZOID ; ADD THE XPATH FOR THIS NODE TO THE XPATH INDEX
    39  N GA D ATT("GA",ZOID) ; GET ATTRIBUTES FOR THIS NODE
    40  I $D(GA) D  ; PROCESS THE ATTRIBUTES
    41  . N ZI S ZI=""
    42  . F  S ZI=$O(GA(ZI)) Q:ZI=""  D  ; FOR EACH ATTRIBUTE
    43  . . N ZP S ZP=NEWPATH_"@"_ZI ; PATH FOR ATTRIBUTE
    44  . . S @ZXPARY@(ZP)=GA(ZI) ; ADD THE ATTRIBUTE XPATH TO THE XP ARRAY
    45  . . I GA(ZI)'="" D ADDNARY(ZP,GA(ZI)) ; ADD THE NHIN ARRAY VALUE
    46  N GD D DATA("GD",ZOID) ; SEE IF THERE IS DATA FOR THIS NODE
    47  I $D(GD(2)) D  ;
    48  . M @ZXPARY@(NEWPATH)=GD ; IF MULITPLE DATA MERGE TO THE ARRAY
    49  E  I $D(GD(1)) D  ;
    50  . S @ZXPARY@(NEWPATH)=GD(1) ; IF SINGLE VALUE, ADD TO ARRAY
    51  . I GD(1)'="" D ADDNARY(NEWPATH,GD(1)) ; ADD TO NHIN ARRAY
    52  N ZFRST S ZFRST=$$FIRST(ZOID) ; SET FIRST CHILD
    53  I ZFRST'=0 D  ; THERE IS A CHILD
    54  . N ZNUM
    55  . N ZMULT S ZMULT=$$ISMULT(ZFRST) ; IS FIRST CHILD A MULTIPLE
    56  . D DOMO(ZFRST,NEWPATH,ZNARY,ZXIDX,ZXPARY,$S(ZMULT:1,1:""),ZREDUX) ; THE CHILD
    57  N GNXT S GNXT=$$NXTSIB(ZOID)
    58  I $$TAG(GNXT)'=$$TAG(ZOID) S ZNUM="" ; RESET COUNTING AFTER MULTIPLES
    59  I GNXT'=0 D  ;
    60  . N ZMULT S ZMULT=$$ISMULT(GNXT) ; IS THE SIBLING A MULTIPLE?
    61  . I (ZNUM="")&(ZMULT) D  ; SIBLING IS FIRST OF MULTIPLES
    62  . . N ZNUM S ZNUM=1 ;
    63  . . D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; DO NEXT SIB
    64  . E  D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,$S(ZNUM>0:ZNUM+1,1:""),ZREDUX) ; SIB
    65  Q
    66  ;
    67 ADDNARY(ZXP,ZVALUE) ; ADD AN NHIN ARRAY VALUE TO ZNARY
    68  ;
    69  ; IF ZATT=1 THE ARRAY IS ADDED AS ATTRIBUTES
    70  ;
    71  N ZZI,ZZJ,ZZN
    72  S ZZI=$P(ZXP,"/",1) ; FIRST PIECE OF XPATH ARRAY
    73  I ZZI="" Q  ; DON'T ADD THIS ONE .. PROBABLY THE //results NODE
    74  S ZZJ=$P(ZXP,ZZI_"/",2) ; REST OF XPATH ARRAY
    75  S ZZJ=$TR(ZZJ,"/",".") ; REPLACE / WITH .
    76  I ZZI'["]" D  ; A SINGLETON
    77  . S ZZN=1
    78  E  D  ; THERE IS AN [x] OCCURANCE
    79  . S ZZN=$P($P(ZZI,"[",2),"]",1) ; PULL OUT THE OCCURANCE
    80  . S ZZI=$P(ZZI,"[",1) ; TAKE OUT THE [X]
    81  I ZZJ'="" D  ; TIME TO ADD THE VALUE
    82  . S @ZNARY@(ZZI,ZZN,ZZJ)=ZVALUE
    83  Q
    84  ;
    85 PARSE(INXML,INDOC) ;CALL THE MXML PARSER ON INXML, PASSED BY NAME
    86  ; INDOC IS PASSED AS THE DOCUMENT NAME - DON'T KNOW WHERE TO STORE THIS NOW
    87  ; EXTRINSIC WHICH RETURNS THE DOCID ASSIGNED BY MXML
    88  ;Q $$EN^MXMLDOM(INXML)
    89  Q $$EN^MXMLDOM(INXML,"W")
    90  ;
    91 ISMULT(ZOID) ; RETURN TRUE IF ZOID IS ONE OF A MULTIPLE
    92  N ZN
    93  ;I $$TAG(ZOID)["entry" B
    94  S ZN=$$NXTSIB(ZOID)
    95  I ZN'="" Q $$TAG(ZOID)=$$TAG(ZN) ; IF TAG IS THE SAME AS NEXT SIB TAG
    96  Q 0
    97  ;
    98 FIRST(ZOID) ;RETURNS THE OID OF THE FIRST CHILD OF ZOID
    99  Q $$CHILD^MXMLDOM(C0SDOCID,ZOID)
    100  ;
    101 PARENT(ZOID) ;RETURNS THE OID OF THE PARENT OF ZOID
    102  Q $$PARENT^MXMLDOM(C0SDOCID,ZOID)
    103  ;
    104 ATT(RTN,NODE) ;GET ATTRIBUTES FOR ZOID
    105  S HANDLE=C0SDOCID
    106  K @RTN
    107  D GETTXT^MXMLDOM("A")
    108  Q
    109  ;
    110 TAG(ZOID) ; RETURNS THE XML TAG FOR THE NODE
    111  ;I ZOID=149 B ;GPLTEST
    112  N X,Y
    113  S Y=""
    114  S X=$G(C0SCBK("TAG")) ;IS THERE A CALLBACK FOR THIS ROUTINE
    115  I X'="" X X ; EXECUTE THE CALLBACK, SHOULD SET Y
    116  I Y="" S Y=$$NAME^MXMLDOM(C0SDOCID,ZOID)
    117  Q Y
    118  ;
    119 NXTSIB(ZOID) ; RETURNS THE NEXT SIBLING
    120  Q $$SIBLING^MXMLDOM(C0SDOCID,ZOID)
    121  ;
    122 DATA(ZT,ZOID) ; RETURNS DATA FOR THE NODE
    123  ;N ZT,ZN S ZT=""
    124  ;S C0SDOM=$NA(^TMP("MXMLDOM",$J,C0SDOCID))
    125  ;Q $G(@C0SDOM@(ZOID,"T",1))
    126  S ZN=$$TEXT^MXMLDOM(C0SDOCID,ZOID,ZT)
    127  Q
    128  ;
    129 OUTXML(ZRTN,INID,NO1ST) ; USES C0SMXMLB (MXMLBLD) TO OUTPUT XML FROM AN MXMLDOM
    130  ;
    131  S C0SDOCID=INID
    132  I '$D(NO1ST) S NO1ST=0 ; DO NOT SURPRESS THE <?xml tag generation
    133  D START^C0SMXMLB($$TAG(1),,"G",NO1ST)
    134  D NDOUT($$FIRST(1))
    135  D END^C0SMXMLB ;END THE DOCUMENT
    136  M @ZRTN=^TMP("MXMLBLD",$J)
    137  K ^TMP("MXMLBLD",$J)
    138  Q
    139  ;
    140 NDOUT(ZOID) ;CALLBACK ROUTINE - IT IS RECURSIVE
    141  N ZI S ZI=$$FIRST(ZOID)
    142  I ZI'=0 D  ; THERE IS A CHILD
    143  . N ZATT D ATT("ZATT",ZOID) ; THESE ARE THE ATTRIBUTES MOVED TO ZATT
    144  . D MULTI^C0SMXMLB("",$$TAG(ZOID),.ZATT,"NDOUT^C0SMXML(ZI)") ;HAVE CHILDREN
    145  E  D  ; NO CHILD - IF NO CHILDREN, A NODE HAS DATA, IS AN ENDPOINT
    146  . ;W "DOING",ZOID,!
    147  . N ZD D DATA("ZD",ZOID) ;NODES WITHOUT CHILDREN HAVE DATA
    148  . N ZATT D ATT("ZATT",ZOID) ;ATTRIBUTES
    149  . D ITEM^C0SMXMLB("",$$TAG(ZOID),.ZATT,$G(ZD(1))) ;NO CHILDREN
    150  I $$NXTSIB(ZOID)'=0 D  ; THERE IS A SIBLING
    151  . D NDOUT($$NXTSIB(ZOID)) ;RECURSE FOR SIBLINGS
    152  Q
    153  ;
    154 WNHIN(ZDFN) ; WRITES THE XML OUTPUT OF GET^NHINV TO AN XML FILE
    155  ;
    156  N GN,GN2
    157  D GET^NHINV(.GN,ZDFN) ; EXTRACT THE XML
    158  S GN2=$NA(@GN@(1))
    159  W $$OUTPUT^C0SXPATH(GN2,"nhin_"_ZDFN_".xml","/home/wvehr3-09/")
    160  Q
    161  ;
    162 NARY2XML(ZGOUT,ZGIN) ; CREATE XML FROM AN NHIN ARRAY
    163  ; ZGOUT AND ZGIN ARE PASSED BY NAME
    164  N C0SDOCID
    165  W !,ZGOUT," ",ZGIN
    166  S C0SDOCID=$$DOMI(ZGIN) ; PUT IT INTO THE DOM
    167  D OUTXML(ZGOUT,C0SDOCID)
    168  Q
    169  ;
    170  ; EXAMPLE OF NHIN ARRAY FORMAT - THIS IS AN OUTPUT OF DOMO ABOVE WHEN RUN
    171  ; AGAINST THE OUTPUT OF THE GET^NHINV ROUTINE. (THIS IS NOT REAL PATIENT DATA)
    172  ;
    173  ;GNARY("med",1,"doses.dose@dose")=10
    174  ;GNARY("med",1,"doses.dose@noun")="TABLET"
    175  ;GNARY("med",1,"doses.dose@route")="PO"
    176  ;GNARY("med",1,"doses.dose@schedule")="QD"
    177  ;GNARY("med",1,"doses.dose@units")="MG"
    178  ;GNARY("med",1,"doses.dose@unitsPerDose")=1
    179  ;GNARY("med",1,"facility@code")=100
    180  ;GNARY("med",1,"facility@name")="VOE OFFICE INSTITUTION"
    181  ;GNARY("med",1,"form@value")="TAB"
    182  ;GNARY("med",1,"id@value")="1N;O"
    183  ;GNARY("med",1,"location@code")=5
    184  ;GNARY("med",1,"location@name")="3 WEST"
    185  ;GNARY("med",1,"name@value")="LISINOPRIL TAB"
    186  ;GNARY("med",1,"orderID@value")=294
    187  ;GNARY("med",1,"ordered@value")=3110531.001233
    188  ;GNARY("med",1,"orderingProvider@code")=63
    189  ;GNARY("med",1,"orderingProvider@name")="KING,MATTHEW MICHAEL"
    190  ;GNARY("med",1,"products.product.class@code")="ACE INHIBITORS"
    191  ;GNARY("med",1,"products.product.vaGeneric@code")=1990
    192  ;GNARY("med",1,"products.product.vaGeneric@name")="LISINOPRIL"
    193  ;GNARY("med",1,"products.product.vaGeneric@vuid")=4019380
    194  ;GNARY("med",1,"products.product.vaProduct@code")=8118
    195  ;GNARY("med",1,"products.product.vaProduct@name")="LISINOPRIL 10MG TAB"
    196  ;GNARY("med",1,"products.product.vaProduct@vuid")=4008593
    197  ;GNARY("med",1,"products.product@code")=6174
    198  ;GNARY("med",1,"products.product@name")="LISINOPRIL 10MG U/D"
    199  ;GNARY("med",1,"products.product@role")="D"
    200  ;GNARY("med",1,"sig")="10MG BY MOUTH EVERY DAY"
    201  ;GNARY("med",1,"sig@xml:space")="preserve"
    202  ;GNARY("med",1,"status@value")="active"
    203  ;GNARY("med",1,"type@value")="OTC"
    204  ;GNARY("med",1,"vaType@value")="N"
    205  ;
    206  ; DOMI is an extrinsic to insert NHIN ARRAY FORMAT arrays into the DOM
    207  ; it returns 0 or 1 based on success.
    208  ;
    209  ; INARY is passed by name and has the format shown above
    210  ; HANDLE is the document number in the DOM (both MXML and EWD DOMs will
    211  ; be supported eventually - initial implementation is for MXML
    212  ;
    213  ; PARENT is the node id or tag of the parent under which the DOM will
    214  ; be populated. If it is numeric, it is a node. If it is a string, the DOM
    215  ; will be searched to find the tag. If not found and there is no root,
    216  ; it will be inserted as the root. If not found and there is a root, it
    217  ; will be inserted under the root.
    218  ;
    219  ; For the above example the call would be OK=$$DOMI("GNARY",0,"results")
    220  ; because "results" is the root tag. Use OUTXML to render the xml from
    221  ; the DOM.
    222  ;
    223 DOMI(INARY,HANDLE,PARENT) ; EXTRINSIC TO INSERT NHIN ARRAYS TO A DOM
    224  ;
    225  N ZPARNODE
    226  S (SUCCESS,LEVEL,LEVEL(0),NODE)=0
    227  I '$D(INARY) Q 0 ; NO ARRAY PASSED
    228  I '$D(HANDLE) S HANDLE=$$NEWDOM() ; MAKE A NEW DOM
    229  ;I PARENT="" S PARENT="root"
    230  I +$G(PARENT)>0 S ZPARNODE=PARENT ; WE HAVE BEEN PASSED A PARENT NODE ID
    231  E  I $L($G(PARENT))>0 D  ; TBD FIND THE PARENT IN THE DOM AND SET LEVEL
    232  . D STARTELE^MXMLDOM(PARENT) ; INSERT THE PARENT NODE
    233  . S ZPARNODE=1 ;
    234  ; WE NOW HAVE A HANDLE AND A PARENT NODE AND LEVEL HAS BEEN SET
    235  N ZEXARY
    236  D EXPAND("ZEXARY",INARY) ; EXPAND THE NHIN ARRAY
    237  D MAJOR("ZEXARY") ; PROCESS ALL THE NODES TO BE ADDED
    238  I $L($G(PARENT))>0 D ENDELE^MXMLDOM(PARENT) ; CLOSE OUT THE PARENT NODE
    239  Q HANDLE ; SUCCESS
    240  ;
    241 MAJOR(ZARY) ; RECURSIVE ROUTINE FOR INTERMEDIATE NODES
    242  N ZI S ZI=""
    243  N ZTAG
    244  F  S ZI=$O(@ZARY@(ZI)) Q:ZI=""  D  ; FOR EACH SECTION
    245  . N ZELEADD S ZELEADD=0
    246  . I ZI["@" D  ; END NODE HAS NO VALUE, ONLY ATTRIBUTES
    247  . . S ZTAG=$P(ZI,"@",1) ; PULL OUT THE TAG
    248  . . K ZATT ; CLEAR OUT LAST ONE
    249  . . M ZATT=@ZARY@(ZI,1) ; GET ATTRIBUTE ARRAY
    250  . . D STARTELE^MXMLDOM(ZTAG,.ZATT) ; ADD THE NODE
    251  . . S ZELEADD=1 ; FLAG TO NOT ADD THE ELEMENT TWICE
    252  . I $O(@ZARY@(ZI,""))="" D  ;END NODE
    253  . . S ZTAG=ZI ; USE ZI FOR THE TAG
    254  . . I 'ZELEADD D STARTELE^MXMLDOM(ZTAG) ; ADD ELEMENT IF NOT THERE
    255  . . S ZELEADD=1 ; ADDED AN ELEMENT
    256  . . D CHAR^MXMLDOM($G(@ZARY@(ZI))) ; INSERT THE VALUE
    257  . I ZELEADD D  Q  ; NO MORE TO DO ON THIS LEVEL
    258  . . D ENDELE^MXMLDOM(ZTAG) ; CLOSE THE ELEMENT BEFORE LEAVING
    259  . N NEWARY ; INDENTED ARRAY
    260  . N ZN S ZN=0
    261  . F  S ZN=$O(@ZARY@(ZI,ZN)) Q:ZN=""  D  ; FOR EACH MULTIPLE
    262  . . D STARTELE^MXMLDOM(ZI) ; ADD THE INTERMEDIATE TAG
    263  . . S NEWARY=$NA(@ZARY@(ZI,ZN)) ; INDENT THE ARRAY
    264  . . D MAJOR(NEWARY) ; RECURSE FOR INDENTED ARRAY
    265  . . D ENDELE^MXMLDOM(ZI) ; END THE INTERMEDIATE TAG
    266  Q
    267  ;
    268 EXPAND(ZZOUT,ZZIN) ; EXPANDS NHIN ARRAY FORMAT TO AN EXPANDED
    269  ; CONSISTENT FORMAT
    270  ; GNARY("patient",1,"facilities[2].facility@code")="050"
    271  ; becomes G2ARY("patient",1,"facilities",2,"facility@",1,"code")="050"
    272  ; for easier processing (this is fileman format genius)
    273  ; basically removes the dot notation from the strings
    274  ;
    275  N ZZI
    276  S ZZI=""
    277  F  S ZZI=$O(@ZZIN@(ZZI)) Q:ZZI=""  D  ;
    278  . N ZZN S ZZN=0
    279  . F  S ZZN=$O(@ZZIN@(ZZI,ZZN)) Q:ZZN=""  D  ;
    280  . . N ZZS S ZZS=""
    281  . . N GA ;PUSH STACK
    282  . . F  S ZZS=$O(@ZZIN@(ZZI,ZZN,ZZS)) Q:ZZS=""  D  ;
    283  . . . K GA ; NEW STACK
    284  . . . D PUSH^C0SXPATH("GA",ZZI_"^"_ZZN) ; PUSH PARENT
    285  . . . N ZZV ; PLACE TO STASH THE VALUE
    286  . . . S ZZV=@ZZIN@(ZZI,ZZN,ZZS) ; VALUE
    287  . . . W !,"VALUE:",ZZV
    288  . . . N GK ; COUNTER
    289  . . . F GK=1:1:$L(ZZS,".") D  ; FOR EACH INTERMEDIATE NODE
    290  . . . . N ZZN2 S ZZN2=1 ; DEFAULT IF NO [X]
    291  . . . . N GM S GM=$P(ZZS,".",GK) ; TAG
    292  . . . . I GM["[" D  ; IT'S A MULTIPLE
    293  . . . . . S ZZN2=$P($P(GM,"[",2),"]",1) ; PULL OUT THE NUMBER
    294  . . . . . S GM=$P(GM,"[",1) ; PULL OUT THE TAG
    295  . . . . I GM["@" D  ; IT'S GOT ATTRIBUTES
    296  . . . . . N GM2 S GM2=$P(GM,"@",2) ; PULLOUT THE ATTRIBUTE NAME
    297  . . . . . D PUSH^C0SXPATH("GA",$P(GM,"@",1)_"@"_"^"_ZZN2) ; PUSH THE TAG
    298  . . . . . D PUSH^C0SXPATH("GA",GM2_"^"_ZZN2)
    299  . . . . E  D PUSH^C0SXPATH("GA",GM_"^"_ZZN2) ;
    300  . . . S GA(GA(0))=$P(GA(GA(0)),"^",1)_"^" ; GET RID OF THE LAST "1"
    301  . . . N GZI S GZI="" ; STRING FOR THE INDEX
    302  . . . F GK=1:1:GA(0) D  ; TIME TO REVERSE POP THE TAGS
    303  . . . . S GM=$P(GA(GK),"^",1) ; THE TAG
    304  . . . . S ZZN2=$P(GA(GK),"^",2) ; THE NUMBER IF ANY
    305  . . . . I ZZN2="" S GZI=GZI_""""_GM_"""" ; FOR THE LAST ONE
    306  . . . . E  S GZI=GZI_""""_GM_""""_","_ZZN2_"," ; FOR THE REST
    307  . . . S GZI2=ZZOUT_"("_GZI_")" ; INCLUDE THE ARRAY NAME
    308  . . . W !,GZI
    309  . . . S @GZI2=ZZV ; REMEMBER THE VALUE?
    310  Q
    311  ;
    312 NEWDOM() ; extrinsic which creates a new DOM and returns the HANDLE
    313  N CBK,SUCCESS,LEVEL,NODE,HANDLE
    314  K ^TMP("MXMLERR",$J)
    315  L +^TMP("MXMLDOM",$J):5
    316  E  Q 0
    317  S HANDLE=$O(^TMP("MXMLDOM",$J,""),-1)+1,^(HANDLE)=""
    318  L -^TMP("MXMLDOM",$J)
    319  Q HANDLE
    320  ;
     1C0SDOM    ; GPL - Smart Container - DOM PROCESSING ROUTINES ;6/6/11  17:05
     2        ;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
     3        ;Copyright 2011,2012 George Lilly.  Licensed under the terms of the GNU
     4        ;General Public License See attached copy of the License.
     5        ;
     6        ;This program is free software; you can redistribute it and/or modify
     7        ;it under the terms of the GNU General Public License as published by
     8        ;the Free Software Foundation; either version 2 of the License, or
     9        ;(at your option) any later version.
     10        ;
     11       
     12        ;This program is distributed in the hope that it will be useful,
     13        ;but WITHOUT ANY WARRANTY; without even the implied warranty of
     14        ;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
     15        ;GNU General Public License for more details.
     16        ;
     17        ;You should have received a copy of the GNU General Public License along
     18        ;with this program; if not, write to the Free Software Foundation, Inc.,
     19        ;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
     20        ;
     21        Q
     22        ;
     23DOMO(ZOID,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; RECURSIVE ROUTINE TO POPULATE
     24        ; THE XPATH INDEX ZXIDX, PASSED BY NAME
     25        ; THE XPATH ARRAY XPARY, PASSED BY NAME
     26        ; ZOID IS THE STARTING OID
     27        ; ZPATH IS THE STARTING XPATH, USUALLY "/"
     28        ; ZNUM IS THE MULTIPLE NUMBER [x], USUALLY NULL WHEN ON THE TOP NODE
     29        ; ZREDUX IS THE XPATH REDUCTION STRING, TAKEN OUT OF EACH XPATH IF PRESENT
     30        I $G(ZREDUX)="" S ZREDUX=""
     31        N NEWPATH,NARY ; NEWPATH IS AN XPATH NARY IS AN NHIN MUMPS ARRAY
     32        N NEWNUM S NEWNUM=""
     33        I $G(ZNUM)>0 S NEWNUM="["_ZNUM_"]"
     34        S NEWPATH=ZPATH_"/"_$$TAG(ZOID)_NEWNUM ; CREATE THE XPATH FOR THIS NODE
     35        I $G(ZREDUX)'="" D  ; REDUX PROVIDED?
     36        . N GT S GT=$P(NEWPATH,ZREDUX,2)
     37        . I GT'="" S NEWPATH=GT
     38        S @ZXIDX@(NEWPATH)=ZOID ; ADD THE XPATH FOR THIS NODE TO THE XPATH INDEX
     39        N GA D ATT("GA",ZOID) ; GET ATTRIBUTES FOR THIS NODE
     40        I $D(GA) D  ; PROCESS THE ATTRIBUTES
     41        . N ZI S ZI=""
     42        . F  S ZI=$O(GA(ZI)) Q:ZI=""  D  ; FOR EACH ATTRIBUTE
     43        . . N ZP S ZP=NEWPATH_"@"_ZI ; PATH FOR ATTRIBUTE
     44        . . S @ZXPARY@(ZP)=GA(ZI) ; ADD THE ATTRIBUTE XPATH TO THE XP ARRAY
     45        . . I GA(ZI)'="" D ADDNARY(ZP,GA(ZI)) ; ADD THE NHIN ARRAY VALUE
     46        N GD D DATA("GD",ZOID) ; SEE IF THERE IS DATA FOR THIS NODE
     47        I $D(GD(2)) D  ;
     48        . M @ZXPARY@(NEWPATH)=GD ; IF MULITPLE DATA MERGE TO THE ARRAY
     49        E  I $D(GD(1)) D  ;
     50        . S @ZXPARY@(NEWPATH)=GD(1) ; IF SINGLE VALUE, ADD TO ARRAY
     51        . I GD(1)'="" D ADDNARY(NEWPATH,GD(1)) ; ADD TO NHIN ARRAY
     52        N ZFRST S ZFRST=$$FIRST(ZOID) ; SET FIRST CHILD
     53        I ZFRST'=0 D  ; THERE IS A CHILD
     54        . N ZNUM
     55        . N ZMULT S ZMULT=$$ISMULT(ZFRST) ; IS FIRST CHILD A MULTIPLE
     56        . D DOMO(ZFRST,NEWPATH,ZNARY,ZXIDX,ZXPARY,$S(ZMULT:1,1:""),ZREDUX) ; THE CHILD
     57        N GNXT S GNXT=$$NXTSIB(ZOID)
     58        I $$TAG(GNXT)'=$$TAG(ZOID) S ZNUM="" ; RESET COUNTING AFTER MULTIPLES
     59        I GNXT'=0 D  ;
     60        . N ZMULT S ZMULT=$$ISMULT(GNXT) ; IS THE SIBLING A MULTIPLE?
     61        . I (ZNUM="")&(ZMULT) D  ; SIBLING IS FIRST OF MULTIPLES
     62        . . N ZNUM S ZNUM=1 ;
     63        . . D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,ZNUM,ZREDUX) ; DO NEXT SIB
     64        . E  D DOMO(GNXT,ZPATH,ZNARY,ZXIDX,ZXPARY,$S(ZNUM>0:ZNUM+1,1:""),ZREDUX) ; SIB
     65        Q
     66        ;
     67ADDNARY(ZXP,ZVALUE)     ; ADD AN NHIN ARRAY VALUE TO ZNARY
     68        ;
     69        ; IF ZATT=1 THE ARRAY IS ADDED AS ATTRIBUTES
     70        ;
     71        N ZZI,ZZJ,ZZN
     72        S ZZI=$P(ZXP,"/",1) ; FIRST PIECE OF XPATH ARRAY
     73        I ZZI="" Q  ; DON'T ADD THIS ONE .. PROBABLY THE //results NODE
     74        S ZZJ=$P(ZXP,ZZI_"/",2) ; REST OF XPATH ARRAY
     75        S ZZJ=$TR(ZZJ,"/",".") ; REPLACE / WITH .
     76        I ZZI'["]" D  ; A SINGLETON
     77        . S ZZN=1
     78        E  D  ; THERE IS AN [x] OCCURANCE
     79        . S ZZN=$P($P(ZZI,"[",2),"]",1) ; PULL OUT THE OCCURANCE
     80        . S ZZI=$P(ZZI,"[",1) ; TAKE OUT THE [X]
     81        I ZZJ'="" D  ; TIME TO ADD THE VALUE
     82        . S @ZNARY@(ZZI,ZZN,ZZJ)=ZVALUE
     83        Q
     84        ;
     85PARSE(INXML,INDOC)      ;CALL THE MXML PARSER ON INXML, PASSED BY NAME
     86        ; INDOC IS PASSED AS THE DOCUMENT NAME - DON'T KNOW WHERE TO STORE THIS NOW
     87        ; EXTRINSIC WHICH RETURNS THE DOCID ASSIGNED BY MXML
     88        ;Q $$EN^MXMLDOM(INXML)
     89        Q $$EN^MXMLDOM(INXML,"W")
     90        ;
     91ISMULT(ZOID)    ; RETURN TRUE IF ZOID IS ONE OF A MULTIPLE
     92        N ZN
     93        ;I $$TAG(ZOID)["entry" B
     94        S ZN=$$NXTSIB(ZOID)
     95        I ZN'="" Q $$TAG(ZOID)=$$TAG(ZN) ; IF TAG IS THE SAME AS NEXT SIB TAG
     96        Q 0
     97        ;
     98FIRST(ZOID)     ;RETURNS THE OID OF THE FIRST CHILD OF ZOID
     99        Q $$CHILD^MXMLDOM(C0SDOCID,ZOID)
     100        ;
     101PARENT(ZOID)    ;RETURNS THE OID OF THE PARENT OF ZOID
     102        Q $$PARENT^MXMLDOM(C0SDOCID,ZOID)
     103        ;
     104ATT(RTN,NODE)   ;GET ATTRIBUTES FOR ZOID
     105        S HANDLE=C0SDOCID
     106        K @RTN
     107        D GETTXT^MXMLDOM("A")
     108        Q
     109        ;
     110TAG(ZOID)       ; RETURNS THE XML TAG FOR THE NODE
     111        ;I ZOID=149 B ;GPLTEST
     112        N X,Y
     113        S Y=""
     114        S X=$G(C0SCBK("TAG")) ;IS THERE A CALLBACK FOR THIS ROUTINE
     115        I X'="" X X ; EXECUTE THE CALLBACK, SHOULD SET Y
     116        I Y="" S Y=$$NAME^MXMLDOM(C0SDOCID,ZOID)
     117        Q Y
     118        ;
     119NXTSIB(ZOID)    ; RETURNS THE NEXT SIBLING
     120        Q $$SIBLING^MXMLDOM(C0SDOCID,ZOID)
     121        ;
     122DATA(ZT,ZOID)   ; RETURNS DATA FOR THE NODE
     123        ;N ZT,ZN S ZT=""
     124        ;S C0SDOM=$NA(^TMP("MXMLDOM",$J,C0SDOCID))
     125        ;Q $G(@C0SDOM@(ZOID,"T",1))
     126        S ZN=$$TEXT^MXMLDOM(C0SDOCID,ZOID,ZT)
     127        Q
     128        ;
     129OUTXML(ZRTN,INID,NO1ST) ; USES C0SMXMLB (MXMLBLD) TO OUTPUT XML FROM AN MXMLDOM
     130        ;
     131        S C0SDOCID=INID
     132        I '$D(NO1ST) S NO1ST=0 ; DO NOT SURPRESS THE <?xml tag generation
     133        D START^C0SMXMLB($$TAG(1),,"G",NO1ST)
     134        D NDOUT($$FIRST(1))
     135        D END^C0SMXMLB ;END THE DOCUMENT
     136        M @ZRTN=^TMP("MXMLBLD",$J)
     137        K ^TMP("MXMLBLD",$J)
     138        Q
     139        ;
     140NDOUT(ZOID)     ;CALLBACK ROUTINE - IT IS RECURSIVE
     141        N ZI S ZI=$$FIRST(ZOID)
     142        I ZI'=0 D  ; THERE IS A CHILD
     143        . N ZATT D ATT("ZATT",ZOID) ; THESE ARE THE ATTRIBUTES MOVED TO ZATT
     144        . D MULTI^C0SMXMLB("",$$TAG(ZOID),.ZATT,"NDOUT^C0SMXML(ZI)") ;HAVE CHILDREN
     145        E  D  ; NO CHILD - IF NO CHILDREN, A NODE HAS DATA, IS AN ENDPOINT
     146        . ;W "DOING",ZOID,!
     147        . N ZD D DATA("ZD",ZOID) ;NODES WITHOUT CHILDREN HAVE DATA
     148        . N ZATT D ATT("ZATT",ZOID) ;ATTRIBUTES
     149        . D ITEM^C0SMXMLB("",$$TAG(ZOID),.ZATT,$G(ZD(1))) ;NO CHILDREN
     150        I $$NXTSIB(ZOID)'=0 D  ; THERE IS A SIBLING
     151        . D NDOUT($$NXTSIB(ZOID)) ;RECURSE FOR SIBLINGS
     152        Q
     153        ;
     154WNHIN(ZDFN)     ; WRITES THE XML OUTPUT OF GET^NHINV TO AN XML FILE
     155        ;
     156        N GN,GN2
     157        D GET^NHINV(.GN,ZDFN) ; EXTRACT THE XML
     158        S GN2=$NA(@GN@(1))
     159        W $$OUTPUT^C0SXPATH(GN2,"nhin_"_ZDFN_".xml","/home/wvehr3-09/")
     160        Q
     161        ;
     162NARY2XML(ZGOUT,ZGIN)    ; CREATE XML FROM AN NHIN ARRAY
     163        ; ZGOUT AND ZGIN ARE PASSED BY NAME
     164        N C0SDOCID
     165        W !,ZGOUT," ",ZGIN
     166        S C0SDOCID=$$DOMI(ZGIN) ; PUT IT INTO THE DOM
     167        D OUTXML(ZGOUT,C0SDOCID)
     168        Q
     169        ;
     170        ; EXAMPLE OF NHIN ARRAY FORMAT - THIS IS AN OUTPUT OF DOMO ABOVE WHEN RUN
     171        ; AGAINST THE OUTPUT OF THE GET^NHINV ROUTINE. (THIS IS NOT REAL PATIENT DATA)
     172        ;
     173        ;GNARY("med",1,"doses.dose@dose")=10
     174        ;GNARY("med",1,"doses.dose@noun")="TABLET"
     175        ;GNARY("med",1,"doses.dose@route")="PO"
     176        ;GNARY("med",1,"doses.dose@schedule")="QD"
     177        ;GNARY("med",1,"doses.dose@units")="MG"
     178        ;GNARY("med",1,"doses.dose@unitsPerDose")=1
     179        ;GNARY("med",1,"facility@code")=100
     180        ;GNARY("med",1,"facility@name")="VOE OFFICE INSTITUTION"
     181        ;GNARY("med",1,"form@value")="TAB"
     182        ;GNARY("med",1,"id@value")="1N;O"
     183        ;GNARY("med",1,"location@code")=5
     184        ;GNARY("med",1,"location@name")="3 WEST"
     185        ;GNARY("med",1,"name@value")="LISINOPRIL TAB"
     186        ;GNARY("med",1,"orderID@value")=294
     187        ;GNARY("med",1,"ordered@value")=3110531.001233
     188        ;GNARY("med",1,"orderingProvider@code")=63
     189        ;GNARY("med",1,"orderingProvider@name")="KING,MATTHEW MICHAEL"
     190        ;GNARY("med",1,"products.product.class@code")="ACE INHIBITORS"
     191        ;GNARY("med",1,"products.product.vaGeneric@code")=1990
     192        ;GNARY("med",1,"products.product.vaGeneric@name")="LISINOPRIL"
     193        ;GNARY("med",1,"products.product.vaGeneric@vuid")=4019380
     194        ;GNARY("med",1,"products.product.vaProduct@code")=8118
     195        ;GNARY("med",1,"products.product.vaProduct@name")="LISINOPRIL 10MG TAB"
     196        ;GNARY("med",1,"products.product.vaProduct@vuid")=4008593
     197        ;GNARY("med",1,"products.product@code")=6174
     198        ;GNARY("med",1,"products.product@name")="LISINOPRIL 10MG U/D"
     199        ;GNARY("med",1,"products.product@role")="D"
     200        ;GNARY("med",1,"sig")="10MG BY MOUTH EVERY DAY"
     201        ;GNARY("med",1,"sig@xml:space")="preserve"
     202        ;GNARY("med",1,"status@value")="active"
     203        ;GNARY("med",1,"type@value")="OTC"
     204        ;GNARY("med",1,"vaType@value")="N"
     205        ;
     206        ; DOMI is an extrinsic to insert NHIN ARRAY FORMAT arrays into the DOM
     207        ; it returns 0 or 1 based on success.
     208        ;
     209        ; INARY is passed by name and has the format shown above
     210        ; HANDLE is the document number in the DOM (both MXML and EWD DOMs will
     211        ; be supported eventually - initial implementation is for MXML
     212        ;
     213        ; PARENT is the node id or tag of the parent under which the DOM will
     214        ; be populated. If it is numeric, it is a node. If it is a string, the DOM
     215        ; will be searched to find the tag. If not found and there is no root,
     216        ; it will be inserted as the root. If not found and there is a root, it
     217        ; will be inserted under the root.
     218        ;
     219        ; For the above example the call would be OK=$$DOMI("GNARY",0,"results")
     220        ; because "results" is the root tag. Use OUTXML to render the xml from
     221        ; the DOM.
     222        ;
     223DOMI(INARY,HANDLE,PARENT)       ; EXTRINSIC TO INSERT NHIN ARRAYS TO A DOM
     224        ;
     225        N ZPARNODE
     226        S (SUCCESS,LEVEL,LEVEL(0),NODE)=0
     227        I '$D(INARY) Q 0 ; NO ARRAY PASSED
     228        I '$D(HANDLE) S HANDLE=$$NEWDOM() ; MAKE A NEW DOM
     229        ;I PARENT="" S PARENT="root"
     230        I +$G(PARENT)>0 S ZPARNODE=PARENT ; WE HAVE BEEN PASSED A PARENT NODE ID
     231        E  I $L($G(PARENT))>0 D  ; TBD FIND THE PARENT IN THE DOM AND SET LEVEL
     232        . D STARTELE^MXMLDOM(PARENT) ; INSERT THE PARENT NODE
     233        . S ZPARNODE=1 ;
     234        ; WE NOW HAVE A HANDLE AND A PARENT NODE AND LEVEL HAS BEEN SET
     235        N ZEXARY
     236        D EXPAND("ZEXARY",INARY) ; EXPAND THE NHIN ARRAY
     237        D MAJOR("ZEXARY") ; PROCESS ALL THE NODES TO BE ADDED
     238        I $L($G(PARENT))>0 D ENDELE^MXMLDOM(PARENT) ; CLOSE OUT THE PARENT NODE
     239        Q HANDLE ; SUCCESS
     240        ;
     241MAJOR(ZARY)     ; RECURSIVE ROUTINE FOR INTERMEDIATE NODES
     242        N ZI S ZI=""
     243        N ZTAG
     244        F  S ZI=$O(@ZARY@(ZI)) Q:ZI=""  D  ; FOR EACH SECTION
     245        . N ZELEADD S ZELEADD=0
     246        . I ZI["@" D  ; END NODE HAS NO VALUE, ONLY ATTRIBUTES
     247        . . S ZTAG=$P(ZI,"@",1) ; PULL OUT THE TAG
     248        . . K ZATT ; CLEAR OUT LAST ONE
     249        . . M ZATT=@ZARY@(ZI,1) ; GET ATTRIBUTE ARRAY
     250        . . D STARTELE^MXMLDOM(ZTAG,.ZATT) ; ADD THE NODE
     251        . . S ZELEADD=1 ; FLAG TO NOT ADD THE ELEMENT TWICE
     252        . I $O(@ZARY@(ZI,""))="" D  ;END NODE
     253        . . S ZTAG=ZI ; USE ZI FOR THE TAG
     254        . . I 'ZELEADD D STARTELE^MXMLDOM(ZTAG) ; ADD ELEMENT IF NOT THERE
     255        . . S ZELEADD=1 ; ADDED AN ELEMENT
     256        . . D CHAR^MXMLDOM($G(@ZARY@(ZI))) ; INSERT THE VALUE
     257        . I ZELEADD D  Q  ; NO MORE TO DO ON THIS LEVEL
     258        . . D ENDELE^MXMLDOM(ZTAG) ; CLOSE THE ELEMENT BEFORE LEAVING
     259        . N NEWARY ; INDENTED ARRAY
     260        . N ZN S ZN=0
     261        . F  S ZN=$O(@ZARY@(ZI,ZN)) Q:ZN=""  D  ; FOR EACH MULTIPLE
     262        . . D STARTELE^MXMLDOM(ZI) ; ADD THE INTERMEDIATE TAG
     263        . . S NEWARY=$NA(@ZARY@(ZI,ZN)) ; INDENT THE ARRAY
     264        . . D MAJOR(NEWARY) ; RECURSE FOR INDENTED ARRAY
     265        . . D ENDELE^MXMLDOM(ZI) ; END THE INTERMEDIATE TAG
     266        Q
     267        ;
     268EXPAND(ZZOUT,ZZIN)      ; EXPANDS NHIN ARRAY FORMAT TO AN EXPANDED
     269        ; CONSISTENT FORMAT
     270        ; GNARY("patient",1,"facilities[2].facility@code")="050"
     271        ; becomes G2ARY("patient",1,"facilities",2,"facility@",1,"code")="050"
     272        ; for easier processing (this is fileman format genius)
     273        ; basically removes the dot notation from the strings
     274        ;
     275        N ZZI
     276        S ZZI=""
     277        F  S ZZI=$O(@ZZIN@(ZZI)) Q:ZZI=""  D  ;
     278        . N ZZN S ZZN=0
     279        . F  S ZZN=$O(@ZZIN@(ZZI,ZZN)) Q:ZZN=""  D  ;
     280        . . N ZZS S ZZS=""
     281        . . N GA ;PUSH STACK
     282        . . F  S ZZS=$O(@ZZIN@(ZZI,ZZN,ZZS)) Q:ZZS=""  D  ;
     283        . . . K GA ; NEW STACK
     284        . . . D PUSH^C0SXPATH("GA",ZZI_"^"_ZZN) ; PUSH PARENT
     285        . . . N ZZV ; PLACE TO STASH THE VALUE
     286        . . . S ZZV=@ZZIN@(ZZI,ZZN,ZZS) ; VALUE
     287        . . . W !,"VALUE:",ZZV
     288        . . . N GK ; COUNTER
     289        . . . F GK=1:1:$L(ZZS,".") D  ; FOR EACH INTERMEDIATE NODE
     290        . . . . N ZZN2 S ZZN2=1 ; DEFAULT IF NO [X]
     291        . . . . N GM S GM=$P(ZZS,".",GK) ; TAG
     292        . . . . I GM["[" D  ; IT'S A MULTIPLE
     293        . . . . . S ZZN2=$P($P(GM,"[",2),"]",1) ; PULL OUT THE NUMBER
     294        . . . . . S GM=$P(GM,"[",1) ; PULL OUT THE TAG
     295        . . . . I GM["@" D  ; IT'S GOT ATTRIBUTES
     296        . . . . . N GM2 S GM2=$P(GM,"@",2) ; PULLOUT THE ATTRIBUTE NAME
     297        . . . . . D PUSH^C0SXPATH("GA",$P(GM,"@",1)_"@"_"^"_ZZN2) ; PUSH THE TAG
     298        . . . . . D PUSH^C0SXPATH("GA",GM2_"^"_ZZN2)
     299        . . . . E  D PUSH^C0SXPATH("GA",GM_"^"_ZZN2) ;
     300        . . . S GA(GA(0))=$P(GA(GA(0)),"^",1)_"^" ; GET RID OF THE LAST "1"
     301        . . . N GZI S GZI="" ; STRING FOR THE INDEX
     302        . . . F GK=1:1:GA(0) D  ; TIME TO REVERSE POP THE TAGS
     303        . . . . S GM=$P(GA(GK),"^",1) ; THE TAG
     304        . . . . S ZZN2=$P(GA(GK),"^",2) ; THE NUMBER IF ANY
     305        . . . . I ZZN2="" S GZI=GZI_""""_GM_"""" ; FOR THE LAST ONE
     306        . . . . E  S GZI=GZI_""""_GM_""""_","_ZZN2_"," ; FOR THE REST
     307        . . . S GZI2=ZZOUT_"("_GZI_")" ; INCLUDE THE ARRAY NAME
     308        . . . W !,GZI
     309        . . . S @GZI2=ZZV ; REMEMBER THE VALUE?
     310        Q
     311        ;
     312NEWDOM()        ; extrinsic which creates a new DOM and returns the HANDLE
     313        N CBK,SUCCESS,LEVEL,NODE,HANDLE
     314        K ^TMP("MXMLERR",$J)
     315        L +^TMP("MXMLDOM",$J):5
     316        E  Q 0
     317        S HANDLE=$O(^TMP("MXMLDOM",$J,""),-1)+1,^(HANDLE)=""
     318        L -^TMP("MXMLDOM",$J)
     319        Q HANDLE
     320        ;
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